This is pdfTeX, Version 3.14159265-2.6-1.40.17 (TeX Live 2017/dev) (preloaded format=pdflatex 2016.9.8) 12 MAR 2017 16:26 entering extended mode restricted \write18 enabled. %&-line parsing enabled. **sample-thesis-2.ltx (./sample-thesis-2.ltx LaTeX2e <2016/03/31> patch level 3 Babel <3.9r> and hyphenation patterns for 83 language(s) loaded. (./uuthesis2e.cls Document Class: uuthesis2e 1998/04/01 v1.3 University of Utah Thesis Class Document Style `uuthesis2e'. Version 1.8d - 6 Apr 1996 (./Chicago.clo) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/base/size11.c lo File: size11.clo 2014/09/29 v1.4h Standard LaTeX file (size option) ) Using 11pt option Option 11pt uses 5pt for 'tiny': microfilm needs 2mm. \footheight=\dimen102 \numberofappendices=\count79 \c@part=\count80 \c@chapter=\count81 \@titlesize=\dimen103 \@maxsize=\dimen104 \c@figure=\count82 \c@table=\count83 \descriptionmargin=\dimen105 \minilength=\skip41 \c@oldchapter=\count84 \c@oldtocdepth=\count85 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/amscls/amsthm .sty Package: amsthm 2015/03/04 v2.20.2 \thm@style=\toks14 \thm@bodyfont=\toks15 \thm@headfont=\toks16 \thm@notefont=\toks17 \thm@headpunct=\toks18 \thm@preskip=\skip42 \thm@postskip=\skip43 \thm@headsep=\skip44 \dth@everypar=\toks19 LaTeX Info: Redefining \qed on input line 264. ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/mathpa zo.sty Package: mathpazo 2005/04/12 PSNFSS-v9.2a Palatino w/ Pazo Math (D.Puga, WaS) \symupright=\mathgroup4 ) \c@section=\count86 \c@subsection=\count87 \c@paragraph=\count88 \c@subsubsection=\count89 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/amsmath/amsma th.sty Package: amsmath 2016/11/05 v2.16a AMS math features \@mathmargin=\skip45 For additional information on amsmath, use the `?' option. (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/amsmath/amste xt.sty Package: amstext 2000/06/29 v2.01 AMS text (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/amsmath/amsge n.sty File: amsgen.sty 1999/11/30 v2.0 generic functions \@emptytoks=\toks20 \ex@=\dimen106 )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/amsmath/amsbs y.sty Package: amsbsy 1999/11/29 v1.2d Bold Symbols \pmbraise@=\dimen107 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/amsmath/amsop n.sty Package: amsopn 2016/03/08 v2.02 operator names ) \inf@bad=\count90 LaTeX Info: Redefining \frac on input line 213. \uproot@=\count91 \leftroot@=\count92 LaTeX Info: Redefining \overline on input line 375. \classnum@=\count93 \DOTSCASE@=\count94 LaTeX Info: Redefining \ldots on input line 472. LaTeX Info: Redefining \dots on input line 475. LaTeX Info: Redefining \cdots on input line 596. \Mathstrutbox@=\box26 \strutbox@=\box27 \big@size=\dimen108 LaTeX Font Info: Redeclaring font encoding OML on input line 712. LaTeX Font Info: Redeclaring font encoding OMS on input line 713. \macc@depth=\count95 \c@MaxMatrixCols=\count96 \dotsspace@=\muskip10 \c@parentequation=\count97 \dspbrk@lvl=\count98 \tag@help=\toks21 \row@=\count99 \column@=\count100 \maxfields@=\count101 \andhelp@=\toks22 \eqnshift@=\dimen109 \alignsep@=\dimen110 \tagshift@=\dimen111 \tagwidth@=\dimen112 \totwidth@=\dimen113 \lineht@=\dimen114 \@envbody=\toks23 \multlinegap=\skip46 \multlinetaggap=\skip47 \mathdisplay@stack=\toks24 LaTeX Info: Redefining \[ on input line 2817. LaTeX Info: Redefining \] on input line 2818. ) (./amssymb.sty Package: amssymb 1996/11/03 v2.2b (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/amsfonts/amsf onts.sty Package: amsfonts 2013/01/14 v3.01 Basic AMSFonts support \symAMSa=\mathgroup5 \symAMSb=\mathgroup6 LaTeX Font Info: Overwriting math alphabet `\mathfrak' in version `bold' (Font) U/euf/m/n --> U/euf/b/n on input line 106. )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/tools/bm.sty Package: bm 2017/01/16 v1.2c Bold Symbol Support (DPC/FMi) \symboldoperators=\mathgroup7 \symboldletters=\mathgroup8 \symboldsymbols=\mathgroup9 \symboldupright=\mathgroup10 LaTeX Font Info: Redeclaring math alphabet \mathbf on input line 141. LaTeX Info: Redefining \bm on input line 207. ) (./bibnames.sty This is bibnames.sty, Version 1.04 <13 June 1992> (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/beebe/texna mes.sty This is texnames.sty, Version 1.10 <02 March 1998> )) (./citesort.sty \@minsofar=\count102 \@min=\count103 \@cite@temp=\count104 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics/grap hicx.sty Package: graphicx 2014/10/28 v1.0g Enhanced LaTeX Graphics (DPC,SPQR) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics/keyv al.sty Package: keyval 2014/10/28 v1.15 key=value parser (DPC) \KV@toks@=\toks25 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics/grap hics.sty Package: graphics 2016/10/09 v1.0u Standard LaTeX Graphics (DPC,SPQR) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics/trig .sty Package: trig 2016/01/03 v1.10 sin cos tan (DPC) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics-cfg/ graphics.cfg File: graphics.cfg 2016/06/04 v1.11 sample graphics configuration ) Package graphics Info: Driver file: pdftex.def on input line 99. (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics-def/ pdftex.def File: pdftex.def 2017/01/12 v0.06k Graphics/color for pdfTeX (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/in fwarerr.sty Package: infwarerr 2016/05/16 v1.4 Providing info/warning/error messages (HO) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/lt xcmds.sty Package: ltxcmds 2016/05/16 v1.23 LaTeX kernel commands for general use (HO) ) \Gread@gobject=\count105 )) \Gin@req@height=\dimen115 \Gin@req@width=\dimen116 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/base/graphpap .sty Package: graphpap 1994/08/09 v1.0c Standard LaTeX graphpap package (LL) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/tools/longtab le.sty Package: longtable 2014/10/28 v4.11 Multi-page Table package (DPC) \LTleft=\skip48 \LTright=\skip49 \LTpre=\skip50 \LTpost=\skip51 \LTchunksize=\count106 \LTcapwidth=\dimen117 \LT@head=\box28 \LT@firsthead=\box29 \LT@foot=\box30 \LT@lastfoot=\box31 \LT@cols=\count107 \LT@rows=\count108 \c@LT@tables=\count109 \c@LT@chunks=\count110 \LT@p@ftn=\toks26 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/multirow/mult irow.sty Package: multirow 2016/11/25 v2.2 Span multiple rows of a table \multirow@colwidth=\skip52 \multirow@cntb=\count111 \multirow@dima=\skip53 \bigstrutjot=\dimen118 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pdfpages/pdfp ages.sty Package: pdfpages 2017/01/14 v0.5h Insert pages of external PDF documents (AM) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/base/ifthen.s ty Package: ifthen 2014/09/29 v1.1c Standard LaTeX ifthen package (DPC) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/tools/calc.st y Package: calc 2014/10/28 v4.3 Infix arithmetic (KKT,FJ) \calc@Acount=\count112 \calc@Bcount=\count113 \calc@Adimen=\dimen119 \calc@Bdimen=\dimen120 \calc@Askip=\skip54 \calc@Bskip=\skip55 LaTeX Info: Redefining \setlength on input line 80. LaTeX Info: Redefining \addtolength on input line 81. \calc@Ccount=\count114 \calc@Cskip=\skip56 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/eso-pic/eso-p ic.sty Package: eso-pic 2015/07/21 v2.0g eso-pic (RN) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/at begshi.sty Package: atbegshi 2016/06/09 v1.18 At begin shipout hook (HO) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/ifpdf/ifpdf .sty Package: ifpdf 2016/04/04 v3.0 Provides the ifpdf switch )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/xcolor/xcolor .sty Package: xcolor 2016/05/11 v2.12 LaTeX color extensions (UK) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics-cfg/ color.cfg File: color.cfg 2016/01/02 v1.6 sample color configuration ) Package xcolor Info: Driver file: pdftex.def on input line 225. Package xcolor Info: Model `cmy' substituted by `cmy0' on input line 1348. Package xcolor Info: Model `hsb' substituted by `rgb' on input line 1352. Package xcolor Info: Model `RGB' extended on input line 1364. Package xcolor Info: Model `HTML' substituted by `rgb' on input line 1366. Package xcolor Info: Model `Hsb' substituted by `hsb' on input line 1367. Package xcolor Info: Model `tHsb' substituted by `hsb' on input line 1368. Package xcolor Info: Model `HSB' substituted by `hsb' on input line 1369. Package xcolor Info: Model `Gray' substituted by `gray' on input line 1370. Package xcolor Info: Model `wave' substituted by `hsb' on input line 1371. )) \AM@pagewidth=\dimen121 \AM@pageheight=\dimen122 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pdfpages/pppd ftex.def File: pppdftex.def 2017/01/14 v0.5h Pdfpages driver for pdfTeX (AM) ) \AM@pagebox=\box32 \AM@global@opts=\toks27 \AM@toc@title=\toks28 \c@AM@survey=\count115 \AM@templatesizebox=\box33 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/frontendl ayer/tikz.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/basiclaye r/pgf.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/utilities /pgfrcs.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgfutil-common.tex \pgfutil@everybye=\toks29 \pgfutil@tempdima=\dimen123 \pgfutil@tempdimb=\dimen124 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgfutil-common-lists.tex)) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgfutil-latex.def \pgfutil@abb=\box34 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/ms/everyshi.s ty Package: everyshi 2001/05/15 v3.00 EveryShipout Package (MS) )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgfrcs.code.tex Package: pgfrcs 2015/08/07 v3.0.1a (rcs-revision 1.31) )) Package: pgf 2015/08/07 v3.0.1a (rcs-revision 1.15) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/basiclaye r/pgfcore.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/systemlay er/pgfsys.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/systeml ayer/pgfsys.code.tex Package: pgfsys 2014/07/09 v3.0.1a (rcs-revision 1.48) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgfkeys.code.tex \pgfkeys@pathtoks=\toks30 \pgfkeys@temptoks=\toks31 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgfkeysfiltered.code.tex \pgfkeys@tmptoks=\toks32 )) \pgf@x=\dimen125 \pgf@y=\dimen126 \pgf@xa=\dimen127 \pgf@ya=\dimen128 \pgf@xb=\dimen129 \pgf@yb=\dimen130 \pgf@xc=\dimen131 \pgf@yc=\dimen132 \w@pgf@writea=\write3 \r@pgf@reada=\read1 \c@pgf@counta=\count116 \c@pgf@countb=\count117 \c@pgf@countc=\count118 \c@pgf@countd=\count119 \t@pgf@toka=\toks33 \t@pgf@tokb=\toks34 \t@pgf@tokc=\toks35 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/systeml ayer/pgf.cfg File: pgf.cfg 2008/05/14 (rcs-revision 1.7) ) Driver file for pgf: pgfsys-pdftex.def (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/systeml ayer/pgfsys-pdftex.def File: pgfsys-pdftex.def 2014/10/11 (rcs-revision 1.35) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/systeml ayer/pgfsys-common-pdf.def File: pgfsys-common-pdf.def 2013/10/10 (rcs-revision 1.13) ))) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/systeml ayer/pgfsyssoftpath.code.tex File: pgfsyssoftpath.code.tex 2013/09/09 (rcs-revision 1.9) \pgfsyssoftpath@smallbuffer@items=\count120 \pgfsyssoftpath@bigbuffer@items=\count121 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/systeml ayer/pgfsysprotocol.code.tex File: pgfsysprotocol.code.tex 2006/10/16 (rcs-revision 1.4) )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcore.code.tex Package: pgfcore 2010/04/11 v3.0.1a (rcs-revision 1.7) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmath.code.tex (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathcalc.code.tex (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathutil.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathparser.code.tex \pgfmath@dimen=\dimen133 \pgfmath@count=\count122 \pgfmath@box=\box35 \pgfmath@toks=\toks36 \pgfmath@stack@operand=\toks37 \pgfmath@stack@operation=\toks38 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.code.tex (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.basic.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.trigonometric.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.random.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.comparison.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.base.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.round.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.misc.code.tex) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfunctions.integerarithmetics.code.tex))) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmathfloat.code.tex \c@pgfmathroundto@lastzeros=\count123 )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorepoints.code.tex File: pgfcorepoints.code.tex 2013/10/07 (rcs-revision 1.27) \pgf@picminx=\dimen134 \pgf@picmaxx=\dimen135 \pgf@picminy=\dimen136 \pgf@picmaxy=\dimen137 \pgf@pathminx=\dimen138 \pgf@pathmaxx=\dimen139 \pgf@pathminy=\dimen140 \pgf@pathmaxy=\dimen141 \pgf@xx=\dimen142 \pgf@xy=\dimen143 \pgf@yx=\dimen144 \pgf@yy=\dimen145 \pgf@zx=\dimen146 \pgf@zy=\dimen147 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorepathconstruct.code.tex File: pgfcorepathconstruct.code.tex 2013/10/07 (rcs-revision 1.29) \pgf@path@lastx=\dimen148 \pgf@path@lasty=\dimen149 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorepathusage.code.tex File: pgfcorepathusage.code.tex 2014/11/02 (rcs-revision 1.24) \pgf@shorten@end@additional=\dimen150 \pgf@shorten@start@additional=\dimen151 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorescopes.code.tex File: pgfcorescopes.code.tex 2015/05/08 (rcs-revision 1.46) \pgfpic=\box36 \pgf@hbox=\box37 \pgf@layerbox@main=\box38 \pgf@picture@serial@count=\count124 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcoregraphicstate.code.tex File: pgfcoregraphicstate.code.tex 2014/11/02 (rcs-revision 1.12) \pgflinewidth=\dimen152 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcoretransformations.code.tex File: pgfcoretransformations.code.tex 2015/08/07 (rcs-revision 1.20) \pgf@pt@x=\dimen153 \pgf@pt@y=\dimen154 \pgf@pt@temp=\dimen155 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorequick.code.tex File: pgfcorequick.code.tex 2008/10/09 (rcs-revision 1.3) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcoreobjects.code.tex File: pgfcoreobjects.code.tex 2006/10/11 (rcs-revision 1.2) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorepathprocessing.code.tex File: pgfcorepathprocessing.code.tex 2013/09/09 (rcs-revision 1.9) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorearrows.code.tex File: pgfcorearrows.code.tex 2015/05/14 (rcs-revision 1.43) \pgfarrowsep=\dimen156 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcoreshade.code.tex File: pgfcoreshade.code.tex 2013/07/15 (rcs-revision 1.15) \pgf@max=\dimen157 \pgf@sys@shading@range@num=\count125 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcoreimage.code.tex File: pgfcoreimage.code.tex 2013/07/15 (rcs-revision 1.18) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcoreexternal.code.tex File: pgfcoreexternal.code.tex 2014/07/09 (rcs-revision 1.21) \pgfexternal@startupbox=\box39 )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorelayers.code.tex File: pgfcorelayers.code.tex 2013/07/18 (rcs-revision 1.7) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcoretransparency.code.tex File: pgfcoretransparency.code.tex 2013/09/30 (rcs-revision 1.5) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/basicla yer/pgfcorepatterns.code.tex File: pgfcorepatterns.code.tex 2013/11/07 (rcs-revision 1.5) ))) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/modules /pgfmoduleshapes.code.tex File: pgfmoduleshapes.code.tex 2014/03/21 (rcs-revision 1.35) \pgfnodeparttextbox=\box40 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/modules /pgfmoduleplot.code.tex File: pgfmoduleplot.code.tex 2015/08/03 (rcs-revision 1.13) ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/compatibi lity/pgfcomp-version-0-65.sty Package: pgfcomp-version-0-65 2007/07/03 v3.0.1a (rcs-revision 1.7) \pgf@nodesepstart=\dimen158 \pgf@nodesepend=\dimen159 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/compatibi lity/pgfcomp-version-1-18.sty Package: pgfcomp-version-1-18 2007/07/23 v3.0.1a (rcs-revision 1.1) )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/utilities /pgffor.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/utilities /pgfkeys.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgfkeys.code.tex)) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/pgf/math/pgfm ath.sty (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmath.code.tex)) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/utiliti es/pgffor.code.tex Package: pgffor 2013/12/13 v3.0.1a (rcs-revision 1.25) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/math/pg fmath.code.tex) \pgffor@iter=\dimen160 \pgffor@skip=\dimen161 \pgffor@stack=\toks39 \pgffor@toks=\toks40 )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/fronten dlayer/tikz/tikz.code.tex Package: tikz 2015/08/07 v3.0.1a (rcs-revision 1.151) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/librari es/pgflibraryplothandlers.code.tex File: pgflibraryplothandlers.code.tex 2013/08/31 v3.0.1a (rcs-revision 1.20) \pgf@plot@mark@count=\count126 \pgfplotmarksize=\dimen162 ) \tikz@lastx=\dimen163 \tikz@lasty=\dimen164 \tikz@lastxsaved=\dimen165 \tikz@lastysaved=\dimen166 \tikzleveldistance=\dimen167 \tikzsiblingdistance=\dimen168 \tikz@figbox=\box41 \tikz@figbox@bg=\box42 \tikz@tempbox=\box43 \tikz@tempbox@bg=\box44 \tikztreelevel=\count127 \tikznumberofchildren=\count128 \tikznumberofcurrentchild=\count129 \tikz@fig@count=\count130 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/modules /pgfmodulematrix.code.tex File: pgfmodulematrix.code.tex 2013/09/17 (rcs-revision 1.8) \pgfmatrixcurrentrow=\count131 \pgfmatrixcurrentcolumn=\count132 \pgf@matrix@numberofcolumns=\count133 ) \tikz@expandcount=\count134 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/fronten dlayer/tikz/libraries/tikzlibrarytopaths.code.tex File: tikzlibrarytopaths.code.tex 2008/06/17 v3.0.1a (rcs-revision 1.2) ))) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/fronten dlayer/tikz/libraries/tikzlibrarydecorations.markings.code.tex (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/fronten dlayer/tikz/libraries/tikzlibrarydecorations.code.tex (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/modules /pgfmoduledecorations.code.tex \pgfdecoratedcompleteddistance=\dimen169 \pgfdecoratedremainingdistance=\dimen170 \pgfdecoratedinputsegmentcompleteddistance=\dimen171 \pgfdecoratedinputsegmentremainingdistance=\dimen172 \pgf@decorate@distancetomove=\dimen173 \pgf@decorate@repeatstate=\count135 \pgfdecorationsegmentamplitude=\dimen174 \pgfdecorationsegmentlength=\dimen175 ) \tikz@lib@dec@box=\box45 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/pgf/librari es/decorations/pgflibrarydecorations.markings.code.tex)) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/tools/variore f.sty Package: varioref 2016/02/16 v1.5c package for extended references (FMi) \c@vrcnt=\count136 ) (./uuthesis-2016-h.sty Package: uuthesis-2016-h 2016/05/02 v1.08 =============================================================================== This is uuthesis-2016-h.sty version 1.08 <2 May 2016> =============================================================================== (./dissertationapproval.sty) \uuthesis@chaptersectionspace=\dimen176 ) (./uuthesis-color-headings.sty Package: uuthesis-color-headings 2017/03/12 v1.09 =============================================================================== This is uuthesis-color-headings.sty version 1.09 <12 March 2017> WARNING: Color in theses is still experimental, and subject to approval by the University of Utah Thesis Office! One of their concerns is that color pages printed on black-and-white printers should not have text disappear because it is too light to see against a white paper background. =============================================================================== (./rgb.sty)) (./coloralias.sty Package: coloralias 2004/06/25 v0.00 Support for colorname aliases ) Package hocbook Info: Redefining color utahheadingcolor on input line 111. Package hocbook Info: Redefining color utahtheoremcolor on input line 112. (./uuthesis-index.sty Package: uuthesis-index 2016/05/03 v1.01 =============================================================================== This is uuthesis-index.sty version 1.01 <3 May 2016> =============================================================================== (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/base/makeidx. sty Package: makeidx 2014/09/29 v1.0m Standard LaTeX package ) \@indexfile=\write4 \openout4 = `sample-thesis-2.idx'. Writing index file sample-thesis-2.idx ) (./uuthesis-chapterbib.sty Package: uuthesis-chapterbib 2016/04/25 v1.04 =============================================================================== This is uuthesis-chapterbib.sty version 1.04 <25 April 2016> =============================================================================== (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/cite/chapterb ib.sty \c@inputfile=\count137 Package: chapterbib 2010/09/18 v 1.17 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp.sty Package: fp 1995/04/02 `Fixed Point Package', Version 0.8, April 2, 1995 (C) Michael Mehlich (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/defpattern .sty Package: defpattern 1994/10/12 \actioncount=\count138 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-basic.s ty Package: fp-basic 1996/05/13 \FP@xs=\count139 \FP@xia=\count140 \FP@xib=\count141 \FP@xfa=\count142 \FP@xfb=\count143 \FP@rega=\count144 \FP@regb=\count145 \FP@regs=\count146 \FP@times=\count147 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-addons. sty Package: fp-addons 1995/03/15 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-snap.st y Package: fp-snap 1995/04/05 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-exp.sty Package: fp-exp 1995/04/03 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-trigo.s ty Package: fp-trigo 1995/04/14 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-pas.sty Package: fp-pas 1994/08/29 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-random. sty Package: fp-random 1995/02/23 \FPseed=\count148 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-eqn.sty Package: fp-eqn 1995/04/03 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-upn.sty Package: fp-upn 1996/10/21 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/fp/fp-eval.st y Package: fp-eval 1995/04/03 )) \uuchapterbib@chaptersectionspace=\dimen177 \c@uuchapterbibsection=\count149 \c@uuchapterbibsubsection=\count150 \c@uuchapterbibsubsubsection=\count151 \c@uuchapterbibfigure=\count152 \c@uuchapterbibtable=\count153 ) (./mythesis.sty) (./sample-thesis-2.aux (./chap1.aux) (./chap2.aux) (./chap3.aux) (./chap4.aux) (./chap5.aux) (./appa.aux) (./appb.aux) (./appc.aux )) \openout1 = `sample-thesis-2.aux'. LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 207. LaTeX Font Info: ... okay on input line 207. LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 207. LaTeX Font Info: ... okay on input line 207. LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 207. LaTeX Font Info: ... okay on input line 207. LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 207. LaTeX Font Info: ... okay on input line 207. LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 207. LaTeX Font Info: ... okay on input line 207. LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 207. LaTeX Font Info: ... okay on input line 207. LaTeX Font Info: Try loading font information for OT1+ppl on input line 207. (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/ot1ppl .fd File: ot1ppl.fd 2001/06/04 font definitions for OT1/ppl. ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/context/base/supp-p df.mkii [Loading MPS to PDF converter (version 2006.09.02).] \scratchcounter=\count154 \scratchdimen=\dimen178 \scratchbox=\box46 \nofMPsegments=\count155 \nofMParguments=\count156 \everyMPshowfont=\toks41 \MPscratchCnt=\count157 \MPscratchDim=\dimen179 \MPnumerator=\count158 \makeMPintoPDFobject=\count159 \everyMPtoPDFconversion=\toks42 ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/pd ftexcmds.sty Package: pdftexcmds 2016/05/21 v0.22 Utility functions of pdfTeX for LuaTeX (HO ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/if luatex.sty Package: ifluatex 2016/05/16 v1.4 Provides the ifluatex switch (HO) Package ifluatex Info: LuaTeX not detected. ) Package pdftexcmds Info: LuaTeX not detected. Package pdftexcmds Info: \pdf@primitive is available. Package pdftexcmds Info: \pdf@ifprimitive is available. Package pdftexcmds Info: \pdfdraftmode found. ) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/oberdiek/epst opdf-base.sty Package: epstopdf-base 2016/05/15 v2.6 Base part for package epstopdf (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/oberdiek/grfe xt.sty Package: grfext 2016/05/16 v1.2 Manage graphics extensions (HO) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/kv definekeys.sty Package: kvdefinekeys 2016/05/16 v1.4 Define keys (HO) )) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/oberdiek/kvop tions.sty Package: kvoptions 2016/05/16 v3.12 Key value format for package options (HO) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/kv setkeys.sty Package: kvsetkeys 2016/05/16 v1.17 Key value parser (HO) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/oberdiek/et excmds.sty Package: etexcmds 2016/05/16 v1.6 Avoid name clashes with e-TeX commands (HO) Package etexcmds Info: Could not find \expanded. (etexcmds) That can mean that you are not using pdfTeX 1.50 or (etexcmds) that some package has redefined \expanded. (etexcmds) In the latter case, load this package earlier. ))) Package epstopdf-base Info: Redefining graphics rule for `.eps' on input line 4 38. Package grfext Info: Graphics extension search list: (grfext) [.png,.pdf,.jpg,.mps,.jpeg,.jbig2,.jb2,.PNG,.PDF,.JPG,.JPE G,.JBIG2,.JB2,.eps] (grfext) \AppendGraphicsExtensions on input line 456. (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/latexconfig/e pstopdf-sys.cfg File: epstopdf-sys.cfg 2010/07/13 v1.3 Configuration of (r)epstopdf for TeX Liv e )) \AtBeginShipoutBox=\box47 (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/oberdiek/pdfl scape.sty Package: pdflscape 2016/05/14 v0.11 Display of landscape pages in PDF (HO) (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/graphics/lsca pe.sty Package: lscape 2000/10/22 v3.01 Landscape Pages (DPC) ) Package pdflscape Info: Auto-detected driver: pdftex on input line 81. (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/generic/ifxetex/ifx etex.sty Package: ifxetex 2010/09/12 v0.6 Provides ifxetex conditional )) ABD: EveryShipout initializing macros LaTeX Font Info: Font shape `OT1/ppl/bx/n' in size <14.4> not available (Font) Font shape `OT1/ppl/b/n' tried instead on input line 211. LaTeX Font Info: Try loading font information for OML+zplm on input line 211 . (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/omlzpl m.fd File: omlzplm.fd 2002/09/08 Fontinst v1.914 font definitions for OML/zplm. ) LaTeX Font Info: Try loading font information for OMS+zplm on input line 211 . (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/omszpl m.fd File: omszplm.fd 2002/09/08 Fontinst v1.914 font definitions for OMS/zplm. ) LaTeX Font Info: Try loading font information for OMX+zplm on input line 211 . (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/omxzpl m.fd File: omxzplm.fd 2002/09/08 Fontinst v1.914 font definitions for OMX/zplm. ) LaTeX Font Info: Try loading font information for OT1+zplm on input line 211 . (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/ot1zpl m.fd File: ot1zplm.fd 2002/09/08 Fontinst v1.914 font definitions for OT1/zplm. ) LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 11.40997pt on input line 211. LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 8.33606pt on input line 211. LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 6.25204pt on input line 211. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 11.40997pt on input line 211. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 8.33606pt on input line 211. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 6.25204pt on input line 211. Title. [-1 {/usr/uumath/texlive/2017/texmf-var/fonts/map/pdftex/updmap/pdftex.map}] LaTeX Font Info: Try loading font information for OMS+ppl on input line 212. (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/omsppl .fd File: omsppl.fd ) LaTeX Font Info: Font shape `OMS/ppl/m/n' in size <10.95> not available (Font) Font shape `OMS/cmsy/m/n' tried instead on input line 212. Copyright. [-1] LaTeX Font Info: Font shape `OT1/ppl/bx/n' in size <10.95> not available (Font) Font shape `OT1/ppl/b/n' tried instead on input line 213. LaTeX Font Info: Font shape `OT1/ppl/bx/n' in size <12> not available (Font) Font shape `OT1/ppl/b/n' tried instead on input line 213. [2] Package xcolor Warning: Incompatible color definition on input line 215. (./abstract.tex) Abstract. [3] Dedication. [4] Package xcolor Warning: Incompatible color definition on input line 217. (./sample-thesis-2.toc [5]) \tf@toc=\write5 \openout5 = `sample-thesis-2.toc'. Contents. [6] Package xcolor Warning: Incompatible color definition on input line 218. List of Figures. (./sample-thesis-2.lof) \tf@lof=\write6 \openout6 = `sample-thesis-2.lof'. [7] Package xcolor Warning: Incompatible color definition on input line 219. List of Tables. (./sample-thesis-2.lot) \tf@lot=\write7 \openout7 = `sample-thesis-2.lot'. [8] Package xcolor Warning: Incompatible color definition on input line 228. Notation and Symbols. (./notation.tex) [9] Package xcolor Warning: Incompatible color definition on input line 238. Typesetting Experiments. (./samples.tex (./rgb.sty) Package xcolor Warning: Incompatible color definition on input line 23. Package xcolor Warning: Incompatible color definition on input line 26. Package xcolor Warning: Incompatible color definition on input line 35. Package xcolor Warning: Incompatible color definition on input line 41. LaTeX Warning: Citation `Lahiri:2002:ADA' in file `sample-thesis-2' on page x u ndefined on input line 56. LaTeX Warning: Citation `Hall:1994:PNE' in file `sample-thesis-2' on page x und efined on input line 70. LaTeX Font Info: Try loading font information for U+fplmbb on input line 75. (/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/tex/latex/psnfss/ufplmb b.fd File: ufplmbb.fd 2003/10/30 Fontinst v1.914 font definitions for U/fplmbb. ) LaTeX Font Info: Font shape `OMS/ppl/m/it' in size <10.95> not available (Font) Font shape `OMS/cmsy/m/n' tried instead on input line 84. Underfull \vbox (badness 10000) has occurred while \output is active [] [10] Package xcolor Warning: Incompatible color definition on input line 105. Package xcolor Warning: Incompatible color definition on input line 110. Package xcolor Warning: Incompatible color definition on input line 131. Package xcolor Warning: Incompatible color definition on input line 163. Underfull \vbox (badness 10000) has occurred while \output is active [] [11] Package xcolor Warning: Incompatible color definition on input line 213. Package xcolor Warning: Incompatible color definition on input line 215. Package xcolor Warning: Incompatible color definition on input line 216. Package xcolor Warning: Incompatible color definition on input line 219. Package xcolor Warning: Incompatible color definition on input line 221. Package xcolor Warning: Incompatible color definition on input line 232. Underfull \vbox (badness 10000) has occurred while \output is active [] [12] Underfull \vbox (badness 10000) has occurred while \output is active [] [13]) [14] \openout2 = `chap1.aux'. (./chap1.tex DEBUG: @chapter: arg 1 = [The First] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax T he First}] CHAPTER 1. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 15.0049pt on input line 10. LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 10.42007pt on input line 10. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 15.0049pt on input line 10. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 10.42007pt on input line 10. Package xcolor Warning: Incompatible color definition on input line 10. Package xcolor Warning: Incompatible color definition on input line 10. Package xcolor Warning: Incompatible color definition on input line 14. Package xcolor Warning: Incompatible color definition on input line 17. Package xcolor Warning: Incompatible color definition on input line 26. Package xcolor Warning: Incompatible color definition on input line 27. Package xcolor Warning: Incompatible color definition on input line 27. Package xcolor Warning: Incompatible color definition on input line 27. Package xcolor Warning: Incompatible color definition on input line 28. Package xcolor Warning: Incompatible color definition on input line 29. Package xcolor Warning: Incompatible color definition on input line 29. Package xcolor Warning: Incompatible color definition on input line 29. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 37. (pdftex.def) Requested size: 216.80946pt x 72.2698pt. Package xcolor Warning: Incompatible color definition on input line 38. LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 12.50409pt on input line 44. LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 9.37807pt on input line 44. LaTeX Font Info: Font shape `U/msa/m/n' will be (Font) scaled to size 7.29405pt on input line 44. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 12.50409pt on input line 44. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 9.37807pt on input line 44. LaTeX Font Info: Font shape `U/msb/m/n' will be (Font) scaled to size 7.29405pt on input line 44. Package xcolor Warning: Incompatible color definition on input line 44. Package xcolor Warning: Incompatible color definition on input line 44. Underfull \vbox (badness 10000) has occurred while \output is active [] [1 ] Package xcolor Warning: Incompatible color definition on input line 48. Package xcolor Warning: Incompatible color definition on input line 48. Package xcolor Warning: Incompatible color definition on input line 52. Package xcolor Warning: Incompatible color definition on input line 52. Package xcolor Warning: Incompatible color definition on input line 56. Package xcolor Warning: Incompatible color definition on input line 56. Package xcolor Warning: Incompatible color definition on input line 60. Package xcolor Warning: Incompatible color definition on input line 60. Package xcolor Warning: Incompatible color definition on input line 66. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [2 <./fig1.pdf>] Package xcolor Warning: Incompatible color definition on input line 70. Package xcolor Warning: Incompatible color definition on input line 72. Package xcolor Warning: Incompatible color definition on input line 72. Package xcolor Warning: Incompatible color definition on input line 82. File: fig2.pdf Graphic file (type pdf) Package pdftex.def Info: fig2.pdf used on input line 87. (pdftex.def) Requested size: 216.80946pt x 72.2698pt. Package xcolor Warning: Incompatible color definition on input line 88. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [3 <./fig2.pdf>] Package xcolor Warning: Incompatible color definition on input line 101. Underfull \vbox (badness 5490) has occurred while \output is active [] Overfull \vbox (7.643pt too high) has occurred while \output is active [] [4] Package xcolor Warning: Incompatible color definition on input line 147. Package xcolor Warning: Incompatible color definition on input line 147. Package xcolor Warning: Incompatible color definition on input line 151. Package xcolor Warning: Incompatible color definition on input line 182. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [5] Package xcolor Warning: Incompatible color definition on input line 236. Package xcolor Warning: Incompatible color definition on input line 236. Overfull \hbox (1.4408pt too wide) in paragraph at lines 240--243 []\OT1/ppl/m/n/10.95 The Free Soft-ware Foun-da-tion of-fers al-most 300 soft-w are pack-ages, most eas-ily portable [] Package xcolor Warning: Incompatible color definition on input line 245. Package xcolor Warning: Incompatible color definition on input line 246. Package xcolor Warning: Incompatible color definition on input line 247. Package xcolor Warning: Incompatible color definition on input line 248. Package xcolor Warning: Incompatible color definition on input line 249. Package xcolor Warning: Incompatible color definition on input line 250. Package xcolor Warning: Incompatible color definition on input line 251. Package xcolor Warning: Incompatible color definition on input line 252. Package xcolor Warning: Incompatible color definition on input line 253. Package xcolor Warning: Incompatible color definition on input line 254. Package xcolor Warning: Incompatible color definition on input line 255. Package xcolor Warning: Incompatible color definition on input line 256. Package xcolor Warning: Incompatible color definition on input line 257. Package xcolor Warning: Incompatible color definition on input line 258. Package xcolor Warning: Incompatible color definition on input line 259. Package xcolor Warning: Incompatible color definition on input line 260. Package xcolor Warning: Incompatible color definition on input line 261. Package xcolor Warning: Incompatible color definition on input line 262. Package xcolor Warning: Incompatible color definition on input line 263. Package xcolor Warning: Incompatible color definition on input line 264. Package xcolor Warning: Incompatible color definition on input line 265. Package xcolor Warning: Incompatible color definition on input line 266. Package xcolor Warning: Incompatible color definition on input line 267. Package xcolor Warning: Incompatible color definition on input line 268. Package xcolor Warning: Incompatible color definition on input line 269. Package xcolor Warning: Incompatible color definition on input line 270. Package xcolor Warning: Incompatible color definition on input line 271. Package xcolor Warning: Incompatible color definition on input line 272. Package xcolor Warning: Incompatible color definition on input line 273. Package xcolor Warning: Incompatible color definition on input line 274. Package xcolor Warning: Incompatible color definition on input line 275. Package xcolor Warning: Incompatible color definition on input line 276. Package xcolor Warning: Incompatible color definition on input line 277. Package xcolor Warning: Incompatible color definition on input line 278. Package xcolor Warning: Incompatible color definition on input line 279. Package xcolor Warning: Incompatible color definition on input line 280. Package xcolor Warning: Incompatible color definition on input line 281. Package xcolor Warning: Incompatible color definition on input line 282. Package xcolor Warning: Incompatible color definition on input line 283. Package xcolor Warning: Incompatible color definition on input line 284. Package xcolor Warning: Incompatible color definition on input line 285. Package xcolor Warning: Incompatible color definition on input line 286. Package xcolor Warning: Incompatible color definition on input line 287. Package xcolor Warning: Incompatible color definition on input line 288. Package xcolor Warning: Incompatible color definition on input line 289. Package xcolor Warning: Incompatible color definition on input line 290. Package xcolor Warning: Incompatible color definition on input line 291. Package xcolor Warning: Incompatible color definition on input line 292. Package xcolor Warning: Incompatible color definition on input line 293. Package xcolor Warning: Incompatible color definition on input line 294. Package xcolor Warning: Incompatible color definition on input line 295. Package xcolor Warning: Incompatible color definition on input line 296. Package xcolor Warning: Incompatible color definition on input line 297. Package xcolor Warning: Incompatible color definition on input line 298. Package xcolor Warning: Incompatible color definition on input line 299. Package xcolor Warning: Incompatible color definition on input line 300. Package xcolor Warning: Incompatible color definition on input line 301. Package xcolor Warning: Incompatible color definition on input line 302. Package xcolor Warning: Incompatible color definition on input line 303. Package xcolor Warning: Incompatible color definition on input line 304. Package xcolor Warning: Incompatible color definition on input line 305. Package xcolor Warning: Incompatible color definition on input line 306. Package xcolor Warning: Incompatible color definition on input line 307. Package xcolor Warning: Incompatible color definition on input line 308. Package xcolor Warning: Incompatible color definition on input line 309. Package xcolor Warning: Incompatible color definition on input line 310. Package xcolor Warning: Incompatible color definition on input line 311. Package xcolor Warning: Incompatible color definition on input line 312. Package xcolor Warning: Incompatible color definition on input line 313. Package xcolor Warning: Incompatible color definition on input line 314. Package xcolor Warning: Incompatible color definition on input line 315. Package xcolor Warning: Incompatible color definition on input line 316. Package xcolor Warning: Incompatible color definition on input line 317. Package xcolor Warning: Incompatible color definition on input line 318. Package xcolor Warning: Incompatible color definition on input line 319. Package xcolor Warning: Incompatible color definition on input line 320. Package xcolor Warning: Incompatible color definition on input line 321. Package xcolor Warning: Incompatible color definition on input line 322. Package xcolor Warning: Incompatible color definition on input line 323. Package xcolor Warning: Incompatible color definition on input line 324. Package xcolor Warning: Incompatible color definition on input line 325. Package xcolor Warning: Incompatible color definition on input line 326. Package xcolor Warning: Incompatible color definition on input line 327. Package xcolor Warning: Incompatible color definition on input line 328. Package xcolor Warning: Incompatible color definition on input line 329. Package xcolor Warning: Incompatible color definition on input line 330. Package xcolor Warning: Incompatible color definition on input line 331. Package xcolor Warning: Incompatible color definition on input line 332. Package xcolor Warning: Incompatible color definition on input line 333. Package xcolor Warning: Incompatible color definition on input line 334. Package xcolor Warning: Incompatible color definition on input line 335. Package xcolor Warning: Incompatible color definition on input line 336. Package xcolor Warning: Incompatible color definition on input line 337. Package xcolor Warning: Incompatible color definition on input line 338. Package xcolor Warning: Incompatible color definition on input line 339. Package xcolor Warning: Incompatible color definition on input line 340. Package xcolor Warning: Incompatible color definition on input line 341. Package xcolor Warning: Incompatible color definition on input line 342. Package xcolor Warning: Incompatible color definition on input line 343. Package xcolor Warning: Incompatible color definition on input line 344. Package xcolor Warning: Incompatible color definition on input line 345. Package xcolor Warning: Incompatible color definition on input line 346. Package xcolor Warning: Incompatible color definition on input line 347. Package xcolor Warning: Incompatible color definition on input line 348. Package xcolor Warning: Incompatible color definition on input line 349. Package xcolor Warning: Incompatible color definition on input line 350. Package xcolor Warning: Incompatible color definition on input line 351. Package xcolor Warning: Incompatible color definition on input line 352. Package xcolor Warning: Incompatible color definition on input line 353. Package xcolor Warning: Incompatible color definition on input line 354. Package xcolor Warning: Incompatible color definition on input line 355. Package xcolor Warning: Incompatible color definition on input line 356. Package xcolor Warning: Incompatible color definition on input line 357. Package xcolor Warning: Incompatible color definition on input line 358. Package xcolor Warning: Incompatible color definition on input line 359. Package xcolor Warning: Incompatible color definition on input line 360. Package xcolor Warning: Incompatible color definition on input line 361. Package xcolor Warning: Incompatible color definition on input line 362. Package xcolor Warning: Incompatible color definition on input line 363. Package xcolor Warning: Incompatible color definition on input line 364. Package xcolor Warning: Incompatible color definition on input line 365. Package xcolor Warning: Incompatible color definition on input line 366. Package xcolor Warning: Incompatible color definition on input line 367. Package xcolor Warning: Incompatible color definition on input line 368. Package xcolor Warning: Incompatible color definition on input line 369. Package xcolor Warning: Incompatible color definition on input line 370. Package xcolor Warning: Incompatible color definition on input line 371. Package xcolor Warning: Incompatible color definition on input line 372. Package xcolor Warning: Incompatible color definition on input line 373. Package xcolor Warning: Incompatible color definition on input line 374. Package xcolor Warning: Incompatible color definition on input line 375. Package xcolor Warning: Incompatible color definition on input line 376. Package xcolor Warning: Incompatible color definition on input line 377. Package xcolor Warning: Incompatible color definition on input line 378. Package xcolor Warning: Incompatible color definition on input line 379. Package xcolor Warning: Incompatible color definition on input line 380. Package xcolor Warning: Incompatible color definition on input line 381. Package xcolor Warning: Incompatible color definition on input line 382. Package xcolor Warning: Incompatible color definition on input line 383. Package xcolor Warning: Incompatible color definition on input line 384. Package xcolor Warning: Incompatible color definition on input line 385. Package xcolor Warning: Incompatible color definition on input line 386. Package xcolor Warning: Incompatible color definition on input line 387. Package xcolor Warning: Incompatible color definition on input line 388. Package xcolor Warning: Incompatible color definition on input line 389. Package xcolor Warning: Incompatible color definition on input line 390. Package xcolor Warning: Incompatible color definition on input line 391. Package xcolor Warning: Incompatible color definition on input line 392. Package xcolor Warning: Incompatible color definition on input line 393. Package xcolor Warning: Incompatible color definition on input line 394. Package xcolor Warning: Incompatible color definition on input line 395. Package xcolor Warning: Incompatible color definition on input line 396. Package xcolor Warning: Incompatible color definition on input line 397. Package xcolor Warning: Incompatible color definition on input line 398. Package xcolor Warning: Incompatible color definition on input line 399. Package xcolor Warning: Incompatible color definition on input line 400. Package xcolor Warning: Incompatible color definition on input line 401. Package xcolor Warning: Incompatible color definition on input line 402. Package xcolor Warning: Incompatible color definition on input line 403. Package xcolor Warning: Incompatible color definition on input line 404. Package xcolor Warning: Incompatible color definition on input line 405. Package xcolor Warning: Incompatible color definition on input line 406. Package xcolor Warning: Incompatible color definition on input line 407. Package xcolor Warning: Incompatible color definition on input line 408. Package xcolor Warning: Incompatible color definition on input line 409. Package xcolor Warning: Incompatible color definition on input line 410. Package xcolor Warning: Incompatible color definition on input line 411. Package xcolor Warning: Incompatible color definition on input line 412. Package xcolor Warning: Incompatible color definition on input line 413. Package xcolor Warning: Incompatible color definition on input line 414. Package xcolor Warning: Incompatible color definition on input line 415. Package xcolor Warning: Incompatible color definition on input line 416. Package xcolor Warning: Incompatible color definition on input line 417. Package xcolor Warning: Incompatible color definition on input line 418. Package xcolor Warning: Incompatible color definition on input line 419. Package xcolor Warning: Incompatible color definition on input line 420. Package xcolor Warning: Incompatible color definition on input line 421. Package xcolor Warning: Incompatible color definition on input line 422. Package xcolor Warning: Incompatible color definition on input line 423. Package xcolor Warning: Incompatible color definition on input line 424. Package xcolor Warning: Incompatible color definition on input line 425. Package xcolor Warning: Incompatible color definition on input line 426. Package xcolor Warning: Incompatible color definition on input line 427. Package xcolor Warning: Incompatible color definition on input line 428. Package xcolor Warning: Incompatible color definition on input line 429. Package xcolor Warning: Incompatible color definition on input line 430. Package xcolor Warning: Incompatible color definition on input line 431. Package xcolor Warning: Incompatible color definition on input line 432. Package xcolor Warning: Incompatible color definition on input line 433. Package xcolor Warning: Incompatible color definition on input line 434. Package xcolor Warning: Incompatible color definition on input line 435. Package xcolor Warning: Incompatible color definition on input line 436. Package xcolor Warning: Incompatible color definition on input line 437. Package xcolor Warning: Incompatible color definition on input line 438. Package xcolor Warning: Incompatible color definition on input line 439. Package xcolor Warning: Incompatible color definition on input line 440. Package xcolor Warning: Incompatible color definition on input line 441. Package xcolor Warning: Incompatible color definition on input line 442. Package xcolor Warning: Incompatible color definition on input line 443. Package xcolor Warning: Incompatible color definition on input line 444. Package xcolor Warning: Incompatible color definition on input line 445. Package xcolor Warning: Incompatible color definition on input line 446. Package xcolor Warning: Incompatible color definition on input line 447. Package xcolor Warning: Incompatible color definition on input line 448. Package xcolor Warning: Incompatible color definition on input line 449. Package xcolor Warning: Incompatible color definition on input line 450. Package xcolor Warning: Incompatible color definition on input line 451. Package xcolor Warning: Incompatible color definition on input line 452. Package xcolor Warning: Incompatible color definition on input line 453. Package xcolor Warning: Incompatible color definition on input line 454. Package xcolor Warning: Incompatible color definition on input line 455. Package xcolor Warning: Incompatible color definition on input line 456. Package xcolor Warning: Incompatible color definition on input line 457. Package xcolor Warning: Incompatible color definition on input line 458. Package xcolor Warning: Incompatible color definition on input line 459. Package xcolor Warning: Incompatible color definition on input line 460. Package xcolor Warning: Incompatible color definition on input line 461. Package xcolor Warning: Incompatible color definition on input line 462. Package xcolor Warning: Incompatible color definition on input line 463. Package xcolor Warning: Incompatible color definition on input line 464. Package xcolor Warning: Incompatible color definition on input line 465. Package xcolor Warning: Incompatible color definition on input line 466. Package xcolor Warning: Incompatible color definition on input line 467. Package xcolor Warning: Incompatible color definition on input line 468. Package xcolor Warning: Incompatible color definition on input line 469. Package xcolor Warning: Incompatible color definition on input line 470. Package xcolor Warning: Incompatible color definition on input line 471. Package xcolor Warning: Incompatible color definition on input line 472. Package xcolor Warning: Incompatible color definition on input line 473. Package xcolor Warning: Incompatible color definition on input line 474. Package xcolor Warning: Incompatible color definition on input line 475. Package xcolor Warning: Incompatible color definition on input line 476. Package xcolor Warning: Incompatible color definition on input line 477. Package xcolor Warning: Incompatible color definition on input line 478. Package xcolor Warning: Incompatible color definition on input line 479. Package xcolor Warning: Incompatible color definition on input line 480. Package xcolor Warning: Incompatible color definition on input line 481. Package xcolor Warning: Incompatible color definition on input line 482. Package xcolor Warning: Incompatible color definition on input line 483. Package xcolor Warning: Incompatible color definition on input line 484. Package xcolor Warning: Incompatible color definition on input line 485. Package xcolor Warning: Incompatible color definition on input line 486. Package xcolor Warning: Incompatible color definition on input line 487. Package xcolor Warning: Incompatible color definition on input line 488. Package xcolor Warning: Incompatible color definition on input line 489. Package xcolor Warning: Incompatible color definition on input line 490. Package xcolor Warning: Incompatible color definition on input line 491. Package xcolor Warning: Incompatible color definition on input line 492. Package xcolor Warning: Incompatible color definition on input line 493. Package xcolor Warning: Incompatible color definition on input line 494. Package xcolor Warning: Incompatible color definition on input line 495. Package xcolor Warning: Incompatible color definition on input line 496. Package xcolor Warning: Incompatible color definition on input line 497. Package xcolor Warning: Incompatible color definition on input line 498. Package xcolor Warning: Incompatible color definition on input line 499. Package xcolor Warning: Incompatible color definition on input line 500. Package xcolor Warning: Incompatible color definition on input line 501. Package xcolor Warning: Incompatible color definition on input line 502. Package xcolor Warning: Incompatible color definition on input line 503. Package xcolor Warning: Incompatible color definition on input line 504. Package xcolor Warning: Incompatible color definition on input line 505. Package xcolor Warning: Incompatible color definition on input line 506. Package xcolor Warning: Incompatible color definition on input line 507. Package xcolor Warning: Incompatible color definition on input line 508. Package xcolor Warning: Incompatible color definition on input line 509. Package xcolor Warning: Incompatible color definition on input line 510. Package xcolor Warning: Incompatible color definition on input line 511. Package xcolor Warning: Incompatible color definition on input line 512. Package xcolor Warning: Incompatible color definition on input line 513. Package xcolor Warning: Incompatible color definition on input line 514. Package xcolor Warning: Incompatible color definition on input line 515. Package xcolor Warning: Incompatible color definition on input line 516. Package xcolor Warning: Incompatible color definition on input line 517. Package xcolor Warning: Incompatible color definition on input line 518. Package xcolor Warning: Incompatible color definition on input line 519. Package xcolor Warning: Incompatible color definition on input line 520. Package xcolor Warning: Incompatible color definition on input line 521. Package xcolor Warning: Incompatible color definition on input line 522. Package xcolor Warning: Incompatible color definition on input line 523. Package xcolor Warning: Incompatible color definition on input line 524. Package xcolor Warning: Incompatible color definition on input line 525. Package xcolor Warning: Incompatible color definition on input line 526. Package xcolor Warning: Incompatible color definition on input line 527. Package xcolor Warning: Incompatible color definition on input line 528. Package xcolor Warning: Incompatible color definition on input line 529. Package xcolor Warning: Incompatible color definition on input line 530. Package xcolor Warning: Incompatible color definition on input line 531. Package xcolor Warning: Incompatible color definition on input line 532. Package xcolor Warning: Incompatible color definition on input line 533. Package xcolor Warning: Incompatible color definition on input line 534. Package xcolor Warning: Incompatible color definition on input line 535. Package xcolor Warning: Incompatible color definition on input line 536. Package xcolor Warning: Incompatible color definition on input line 537. Package xcolor Warning: Incompatible color definition on input line 538. Package xcolor Warning: Incompatible color definition on input line 539. Package xcolor Warning: Incompatible color definition on input line 540. Package xcolor Warning: Incompatible color definition on input line 541. Package xcolor Warning: Incompatible color definition on input line 542. Underfull \hbox (badness 1688) in paragraph at lines 245--543 []\OT1/cmtt/m/n/10.95 ddd[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 ddrescu e[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 dejagnu[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 denemo[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 dic o[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 diction[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 diffutils[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 dionysus[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 direvent[][]\OT1/ppl/m/n /10.95 , [] Underfull \hbox (badness 1838) in paragraph at lines 245--543 []\OT1/cmtt/m/n/10.95 gawk[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gcal[] []\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gcc[][]\OT1/ppl/m/n/10.95 , []\OT1 /cmtt/m/n/10.95 gcide[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gcl[][]\OT1 /ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gcompris[][]\OT1/ppl/m/n/10.95 , []\OT1/ cmtt/m/n/10.95 gdb[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gdbm[][]\OT1/p pl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gengen[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt /m/n/10.95 gengetopt[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gettext[][]\ OT1/ppl/m/n/10.95 , [] Underfull \hbox (badness 1210) in paragraph at lines 245--543 []\OT1/cmtt/m/n/10.95 gforth[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 ggra debook[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 ghostscript[][]\OT1/ppl/m/ n/10.95 , []\OT1/cmtt/m/n/10.95 gift[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10 .95 gleem[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 glibc[][]\OT1/ppl/m/n/1 0.95 , []\OT1/cmtt/m/n/10.95 global[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10. 95 glpk[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gmp[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gnash[][]\OT1/ppl/m/n/10.95 , [] Underfull \hbox (badness 1460) in paragraph at lines 245--543 []\OT1/cmtt/m/n/10.95 gnuprologjava[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10. 95 gnuradio[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gnurobots[][]\OT1/ppl /m/n/10.95 , []\OT1/cmtt/m/n/10.95 gnuschool[][]\OT1/ppl/m/n/10.95 , []\OT1/cmt t/m/n/10.95 gnushogi[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gnusound[][] \OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 gnuspeech[][]\OT1/ppl/m/n/10.95 , [] Underfull \hbox (badness 1210) in paragraph at lines 245--543 []\OT1/cmtt/m/n/10.95 idutils[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 ign uit[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 indent[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 inetutils[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 intlfonts[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 jacal[][]\OT1/ppl/m/n/ 10.95 , []\OT1/cmtt/m/n/10.95 jel[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 jwhois[][]\OT1/ppl/m/n/10.95 , []\OT1/cmtt/m/n/10.95 kawa[][]\OT1/ppl/m/n/10.9 5 , []\OT1/cmtt/m/n/10.95 less[][]\OT1/ppl/m/n/10.95 , [] Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [6] Package xcolor Warning: Incompatible color definition on input line 547. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [7] File: fig3.pdf Graphic file (type pdf) Package pdftex.def Info: fig3.pdf used on input line 558. (pdftex.def) Requested size: 216.80946pt x 72.2698pt. Package xcolor Warning: Incompatible color definition on input line 565. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [8 <./fig3.pdf>] Package xcolor Warning: Incompatible color definition on input line 586. Package xcolor Warning: Incompatible color definition on input line 586. Package xcolor Warning: Incompatible color definition on input line 588. Package xcolor Warning: Incompatible color definition on input line 588. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 592. (pdftex.def) Requested size: 108.40472pt x 36.1349pt. Package xcolor Warning: Incompatible color definition on input line 593. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 598. (pdftex.def) Requested size: 162.60709pt x 54.20235pt. Package xcolor Warning: Incompatible color definition on input line 599. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 604. (pdftex.def) Requested size: 216.80946pt x 72.2698pt. Package xcolor Warning: Incompatible color definition on input line 605. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 610. (pdftex.def) Requested size: 271.01183pt x 90.33725pt. Package xcolor Warning: Incompatible color definition on input line 611. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 616. (pdftex.def) Requested size: 379.41655pt x 126.47215pt. Package xcolor Warning: Incompatible color definition on input line 617. Package xcolor Warning: Incompatible color definition on input line 621. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [9] Overfull \vbox (7.643pt too high) has occurred while \output is active [] [10] Package xcolor Warning: Incompatible color definition on input line 655. Package xcolor Warning: Incompatible color definition on input line 655. Package xcolor Warning: Incompatible color definition on input line 657. Package xcolor Warning: Incompatible color definition on input line 659. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 674. (pdftex.def) Requested size: 108.40472pt x 36.1349pt. Package xcolor Warning: Incompatible color definition on input line 676. File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 681. (pdftex.def) Requested size: 162.60709pt x 54.20235pt. Package xcolor Warning: Incompatible color definition on input line 683. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.643pt too high) has occurred while \output is active [] [11] Package xcolor Warning: Incompatible color definition on input line 693. Package xcolor Warning: Incompatible color definition on input line 700. Underfull \vbox (badness 3179) has occurred while \output is active [] Overfull \vbox (7.643pt too high) has occurred while \output is active [] [12] File: fig1.pdf Graphic file (type pdf) Package pdftex.def Info: fig1.pdf used on input line 761. (pdftex.def) Requested size: 320.09349pt x 106.71088pt. Package xcolor Warning: Incompatible color definition on input line 786. Package xcolor Warning: Incompatible color definition on input line 791. Package xcolor Warning: Incompatible color definition on input line 791. Underfull \vbox (badness 2035) has occurred while \output is active [] Overfull \vbox (7.643pt too high) has occurred while \output is active [] [13]) Overfull \vbox (7.643pt too high) has occurred while \output is active [] [14] \openout2 = `chap2.aux'. (./chap2.tex DEBUG: @chapter: arg 1 = [The Second] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax T he Second}] CHAPTER 2. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. (./chap2.bbl Package xcolor Warning: Incompatible color definition on input line 2. Package xcolor Warning: Incompatible color definition on input line 2. LaTeX Warning: Citation `Einstein:1911:BZE' in file `chap2' on page 15 undefine d on input line 29. [15 ])) Overfull \vbox (7.643pt too high) has occurred while \output is active [] [16] \openout2 = `chap3.aux'. (./chap3.tex DEBUG: @chapter: arg 1 = [The Third] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax T he Third}] CHAPTER 3. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. (./chap3.bbl Package xcolor Warning: Incompatible color definition on input line 2. Package xcolor Warning: Incompatible color definition on input line 2. LaTeX Warning: Citation `Einstein:1911:BMAa' in file `chap3' on page 17 undefin ed on input line 28. LaTeX Warning: Citation `Einstein:1911:BMAb' in file `chap3' on page 17 undefin ed on input line 28. LaTeX Warning: Citation `Einstein:1911:BZE' in file `chap3' on page 17 undefine d on input line 37. [17 ])) Overfull \vbox (7.643pt too high) has occurred while \output is active [] [18] \openout2 = `chap4.aux'. (./chap4.tex DEBUG: @chapter: arg 1 = [The Fourth] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax T he Fourth}] CHAPTER 4. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 13. Package xcolor Warning: Incompatible color definition on input line 13. Package xcolor Warning: Incompatible color definition on input line 19. Package xcolor Warning: Incompatible color definition on input line 19. Underfull \vbox (badness 10000) has occurred while \output is active [] [19 ] Package xcolor Warning: Incompatible color definition on input line 25. Package xcolor Warning: Incompatible color definition on input line 25. ) Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [20] \openout2 = `chap5.aux'. (./chap5.tex DEBUG: @chapter: arg 1 = [Extending T\kern -.1667em\lower .5ex\hbox {E}\kern -. 125emX\spacefactor 1000 {} and METAFONT with floating point arithmetic] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax E xtending T\kern -.1667em\lower .5ex\hbox {E}\kern -.125emX\spacefactor 1000 {} and METAFONT with floating point arithmetic}] CHAPTER 5. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. Overfull \hbox (21.00772pt too wide) in paragraph at lines 5--8 []\OT1/ppl/m/n/10.95 In this chap-ter, we demon-strate how to in-cor-po-rate an -other doc-u-ment, such as a previously- [] Overfull \hbox (1.0571pt too wide) in paragraph at lines 16--22 \OT1/ppl/m/n/10.95 holder, which, for jour-nals is nor-mally the jour-nal pub-l isher. Such per-mis-sions would [] Package xcolor Warning: Incompatible color definition on input line 29. [21 ] Package xcolor Warning: Incompatible color definition on input line 67. Package xcolor Warning: Incompatible color definition on input line 89. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [22] Package xcolor Warning: Incompatible color definition on input line 129. Package xcolor Warning: Incompatible color definition on input line 141. Overfull \hbox (18.47824pt too wide) in paragraph at lines 140--142 []\OT1/ppl/m/n/10.95 At this point, we is-sue the block of com-mands above, be- gin-ning with [][]\OT1/cmtt/m/n/10.95 \setupuuchapterbib[]\OT1/ppl/m/n/10.95 : [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf used on input line 171. (pdftex.def) Requested size: 614.29349pt x 794.96806pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf used on input line 171. (pdftex.def) Requested size: 614.29349pt x 794.96806pt. Package pdfpages Warning: Erroneous page width of 0.0pt is corrected. Package pdfpages Warning: Erroneous page height of 0.0pt is corrected. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page1 used on input line 171. (pdftex.def) Requested size: 614.29349pt x 794.96806pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page1 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [23] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page1 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page1 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.643pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page1 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [24 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page2 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page2 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page2 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [25 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page3 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page3 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page3 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [26 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page4 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page4 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page4 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [27 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page5 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page5 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page5 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [28 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page6 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page6 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page6 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [29 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page7 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page7 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page7 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [30 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page8 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page8 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.643pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page8 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [31 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page9 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page9 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page9 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [32 <./tug2007.pdf>] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page10 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page10 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] File: tug2007.pdf Graphic file (type pdf) Package pdftex.def Info: tug2007.pdf, page10 used on input line 171. (pdftex.def) Requested size: 559.00932pt x 723.42384pt. [33 <./tug2007.pdf>]) \openout2 = `appa.aux'. (./appa.tex DEBUG: @chapter: arg 1 = [The First] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax T he First}] APPENDIX A. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 6. Package xcolor Warning: Incompatible color definition on input line 6. ) [34 ] \openout2 = `appb.aux'. (./appb.tex DEBUG: @chapter: arg 1 = [The Second] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax T he Second}] APPENDIX B. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. ) [35 ] \openout2 = `appc.aux'. (./appc.tex DEBUG: @chapter: arg 1 = [The Third] DEBUG: @chapter: arg 2 = [{\hyphenpenalty =10000\exhyphenpenalty =10000\relax T he Third}] APPENDIX C. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 3. Package xcolor Warning: Incompatible color definition on input line 79. Underfull \vbox (badness 10000) has occurred while \output is active [] [36 ] Package xcolor Warning: Incompatible color definition on input line 102. Package xcolor Warning: Incompatible color definition on input line 106. Package xcolor Warning: Incompatible color definition on input line 109. Package xcolor Warning: Incompatible color definition on input line 116. Package xcolor Warning: Incompatible color definition on input line 122. Package xcolor Warning: Incompatible color definition on input line 123. Package xcolor Warning: Incompatible color definition on input line 123. Package xcolor Warning: Incompatible color definition on input line 123. Package xcolor Warning: Incompatible color definition on input line 124. Package xcolor Warning: Incompatible color definition on input line 124. Package xcolor Warning: Incompatible color definition on input line 124. Package xcolor Warning: Incompatible color definition on input line 126. Package xcolor Warning: Incompatible color definition on input line 127. Package xcolor Warning: Incompatible color definition on input line 131. Underfull \vbox (badness 10000) has occurred while \output is active [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [37] (./appc.bbl Package xcolor Warning: Incompatible color definition on input line 2. Package xcolor Warning: Incompatible color definition on input line 2. Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [38] Underfull \hbox (badness 10000) in paragraph at lines 63--68 []\sc A. Ein-stein\OT1/ppl/m/n/10.95 , \OT1/ppl/m/it/10.95 Berich-ti-gung zu me iner Ar-beit: Eine neue Bes-tim-mung der [] Overfull \vbox (7.47873pt too high) has occurred while \output is active [] [39])) Overfull \vbox (7.643pt too high) has occurred while \output is active [] [40] (./sample-thesis-2-bioname.ind Package xcolor Warning: Incompatible color definition on input line 1. Package xcolor Warning: Incompatible color definition on input line 2. Package xcolor Warning: Incompatible color definition on input line 7. Package xcolor Warning: Incompatible color definition on input line 13. Package xcolor Warning: Incompatible color definition on input line 19. Package xcolor Warning: Incompatible color definition on input line 24. Package xcolor Warning: Incompatible color definition on input line 28. Package xcolor Warning: Incompatible color definition on input line 36. Package xcolor Warning: Incompatible color definition on input line 45. Package xcolor Warning: Incompatible color definition on input line 50. Package xcolor Warning: Incompatible color definition on input line 57. Package xcolor Warning: Incompatible color definition on input line 62. Package xcolor Warning: Incompatible color definition on input line 67. Package xcolor Warning: Incompatible color definition on input line 74. [41 ]) (./sample-thesis-2-fsfname.ind Package xcolor Warning: Incompatible color definition on input line 1. Package xcolor Warning: Incompatible color definition on input line 2. Package xcolor Warning: Incompatible color definition on input line 21. Package xcolor Warning: Incompatible color definition on input line 33. Package xcolor Warning: Incompatible color definition on input line 58. Package xcolor Warning: Incompatible color definition on input line 74. Package xcolor Warning: Incompatible color definition on input line 84. [42 ] Package xcolor Warning: Incompatible color definition on input line 96. Package xcolor Warning: Incompatible color definition on input line 178. Package xcolor Warning: Incompatible color definition on input line 189. Overfull \vbox (7.643pt too high) has occurred while \output is active [] [43] Package xcolor Warning: Incompatible color definition on input line 197. Package xcolor Warning: Incompatible color definition on input line 203. Package xcolor Warning: Incompatible color definition on input line 207. Package xcolor Warning: Incompatible color definition on input line 228. Package xcolor Warning: Incompatible color definition on input line 254. Package xcolor Warning: Incompatible color definition on input line 261. Package xcolor Warning: Incompatible color definition on input line 269. Package xcolor Warning: Incompatible color definition on input line 286. Overfull \vbox (7.643pt too high) has occurred while \output is active [] [44] Package xcolor Warning: Incompatible color definition on input line 298. Package xcolor Warning: Incompatible color definition on input line 323. Package xcolor Warning: Incompatible color definition on input line 336. Package xcolor Warning: Incompatible color definition on input line 344. Package xcolor Warning: Incompatible color definition on input line 350. Package xcolor Warning: Incompatible color definition on input line 359. Package xcolor Warning: Incompatible color definition on input line 368. Overfull \vbox (7.643pt too high) has occurred while \output is active [] [45]) (./sample-thesis-2.ind Package xcolor Warning: Incompatible color definition on input line 1. Package xcolor Warning: Incompatible color definition on input line 2. Package xcolor Warning: Incompatible color definition on input line 15. Package xcolor Warning: Incompatible color definition on input line 25. Package xcolor Warning: Incompatible color definition on input line 36. Package xcolor Warning: Incompatible color definition on input line 42. Package xcolor Warning: Incompatible color definition on input line 50. Package xcolor Warning: Incompatible color definition on input line 56. Package xcolor Warning: Incompatible color definition on input line 85. Package xcolor Warning: Incompatible color definition on input line 91. Package xcolor Warning: Incompatible color definition on input line 96. [46 ] Package xcolor Warning: Incompatible color definition on input line 104. Package xcolor Warning: Incompatible color definition on input line 110. Package xcolor Warning: Incompatible color definition on input line 125. Package xcolor Warning: Incompatible color definition on input line 140. Package xcolor Warning: Incompatible color definition on input line 147. Package xcolor Warning: Incompatible color definition on input line 155. Package xcolor Warning: Incompatible color definition on input line 171. Package xcolor Warning: Incompatible color definition on input line 177. Package xcolor Warning: Incompatible color definition on input line 193. Overfull \vbox (7.643pt too high) has occurred while \output is active [] [47] Package xcolor Warning: Incompatible color definition on input line 204. Package xcolor Warning: Incompatible color definition on input line 217. Package xcolor Warning: Incompatible color definition on input line 223. Package xcolor Warning: Incompatible color definition on input line 230. Package xcolor Warning: Incompatible color definition on input line 249. Package xcolor Warning: Incompatible color definition on input line 257. Package xcolor Warning: Incompatible color definition on input line 262. Overfull \vbox (7.643pt too high) has occurred while \output is active [] [48]) (./sample-thesis-2.aux (./chap1.aux) (./chap2.aux) (./chap3.aux) (./chap4.aux) (./chap5.aux) (./appa.aux) (./appb.aux) (./appc.aux)) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) Here is how much of TeX's memory you used: 16202 strings out of 493013 312825 string characters out of 6132885 434225 words of memory out of 5000000 19223 multiletter control sequences out of 15000+600000 47631 words of font info for 140 fonts, out of 8000000 for 9000 1141 hyphenation exceptions out of 8191 55i,19n,65p,434b,1631s stack positions out of 5000i,500n,10000p,200000b,80000s {/home/archive/share/lib/tex/texlive-2017-02/texmf-dist/fonts/enc/dvips/base/ 8r.enc}< /home/archive/share/lib/tex/texlive-2017-02/texmf-dist/fonts/type1/adobe/utopia /putb8a.pfb> Output written on sample-thesis-2.pdf (63 pages, 464969 bytes). PDF statistics: 373 PDF objects out of 1000 (max. 8388607) 262 compressed objects within 3 object streams 0 named destinations out of 1000 (max. 500000) 93 words of extra memory for PDF output out of 10000 (max. 10000000)