Table of contents for issues of Annals of Applied Statistics

Last update: Wed Nov 8 13:50:40 MST 2023                Valid HTML 3.2!

Volume 1, Number 1, June, 2007
Volume 1, Number 2, December, 2007
Volume 2, Number 1, March, 2008
Volume 2, Number 2, June, 2008
Volume 2, Number 3, September, 2008
Volume 2, Number 4, December, 2008
Volume 3, Number 1, March, 2009
Volume 3, Number 2, June, 2009
Volume 3, Number 3, September, 2009
Volume 3, Number 4, December, 2009
Volume 4, Number 1, March, 2010
Volume 4, Number 2, June, 2010
Volume 4, Number 3, September, 2010
Volume 4, Number 4, December, 2010
Volume 5, Number 1, March, 2011
Volume 5, Number 2A, June, 2011
Volume 5, Number 2B, June, 2011
Volume 5, Number 3, September, 2011
Volume 5, Number 4, December, 2011
Volume 6, Number 1, March, 2012
Volume 6, Number 2, June, 2012
Volume 6, Number 3, September, 2012
Volume 6, Number 4, December, 2012
Volume 7, Number 1, March, 2013
Volume 7, Number 2, June, 2013
Volume 7, Number 3, September, 2013
Volume 7, Number 4, December, 2013
Volume 8, Number 1, March, 2014
Volume 8, Number 2, June, 2014
Volume 8, Number 3, September, 2014
Volume 8, Number 4, December, 2014
Volume 9, Number 1, March, 2015
Volume 9, Number 2, June, 2015
Volume 9, Number 3, September, 2015
Volume 9, Number 4, December, 2015
Volume 10, Number 1, March, 2016
Volume 10, Number 2, June, 2016
Volume 10, Number 3, September, 2016
Volume 10, Number 4, December, 2016
Volume 11, Number 1, March, 2017
Volume 11, Number 2, June, 2017
Volume 11, Number 3, September, 2017
Volume 11, Number 4, December, 2017
Volume 12, Number 1, March, 2018
Volume 12, Number 2, June, 2018
Volume 12, Number 3, September, 2018
Volume 12, Number 4, December, 2018
Volume 13, Number 1, March, 2019
Volume 13, Number 2, June, 2019
Volume 13, Number 3, September, 2019
Volume 13, Number 4, December, 2019
Volume 14, Number 1, March, 2020
Volume 14, Number 2, June, 2020
Volume 14, Number 3, September, 2020
Volume 14, Number 4, December, 2020
Volume 4, Number 2101, December, 2020
Volume 15, Number 1, March, 2021
Volume 15, Number 2, June, 2021
Volume 15, Number 3, September, 2021
Volume 15, Number 4, December, 2021
Volume 16, Number 1, March, 2022
Volume 16, Number 2, June, 2022
Volume 16, Number 3, September, 2022
Volume 16, Number 4, December, 2022
Volume 17, Number 1, March, 2023
Volume 17, Number 2, June, 2023
Volume 17, Number 3, September, 2023
Volume 3, Number 2700, September, 2023


Annals of Applied Statistics
Volume 1, Number 1, June, 2007

                      D. R. Cox   Applied statistics: a review . . . . . . 1--16
              David M. Blei and   
               John D. Lafferty   A correlated topic model of
                                  \booktitleScience  . . . . . . . . . . . 17--35
                  Qing Zhou and   
                 Wing Hung Wong   Coupling hidden Markov models for the
                                  discovery of Cis-regulatory modules in
                                  multiple species . . . . . . . . . . . . 36--65
              Anita Araneda and   
        Stephen E. Fienberg and   
                    Alvaro Soto   A statistical approach to simultaneous
                                  mapping and localization for mobile
                                  robots . . . . . . . . . . . . . . . . . 66--84
          Michael A. Newton and   
       Fernando A. Quintana and   
          Johan A. den Boon and   
          Srikumar Sengupta and   
                  Paul Ahlquist   Random-set methods identify distinct
                                  aspects of the enrichment signal in
                                  gene-set analysis  . . . . . . . . . . . 85--106
              Bradley Efron and   
              Robert Tibshirani   On testing the significance of sets of
                                  genes  . . . . . . . . . . . . . . . . . 107--129
             R. Dennis Cook and   
                     Liqiang Ni   Elevated soil lead: Statistical modeling
                                  and apportionment of contributions from
                                  lead-based paint and leaded gasoline . . 130--151
               David M. Seo and   
Pascal J. Goldschmidt-Clermont and   
                      Mike West   Of mice and men: Sparse statistical
                                  modeling in cardiovascular genomics  . . 152--178
           Alexander Gordon and   
              Galina Glazko and   
                   Xing Qiu and   
                Andrei Yakovlev   Control of the mean number of false
                                  discoveries, Bonferroni and stability of
                                  multiple testing . . . . . . . . . . . . 179--190
               Michael L. Stein   Spatial variation of total column ozone
                                  on a global scale  . . . . . . . . . . . 191--210
                  Yang Yang and   
             Ira M. Longini and   
          M. Elizabeth Halloran   A resampling-based test to detect
                                  person-to-person transmission of
                                  infectious disease . . . . . . . . . . . 211--228
            Leontine Alkema and   
          Adrian E. Raftery and   
                Samuel J. Clark   Probabilistic projections of HIV
                                  prevalence using Bayesian melding  . . . 229--248
             Brian J. Reich and   
             Montserrat Fuentes   A multivariate semiparametric Bayesian
                                  spatial modeling framework for hurricane
                                  surface wind fields  . . . . . . . . . . 249--264
                  Peter D. Hoff   Extending the rank likelihood for
                                  semiparametric copula estimation . . . . 265--283

Annals of Applied Statistics
Volume 1, Number 2, December, 2007

            Stephen E. Fienberg   Editorial: Statistics and forensic
                                  science  . . . . . . . . . . . . . . . . 285--286
           Cliff Spiegelman and   
           William A. Tobin and   
           William D. James and   
          Simon J. Sheather and   
              Stuart Wexler and   
               D. Max Roundhill   Chemical and forensic analysis of JFK
                                  assassination bullet lots: Is a second
                                  shooter possible?  . . . . . . . . . . . 287--301
            Jerome Friedman and   
              Trevor Hastie and   
        Holger Höfling and   
              Robert Tibshirani   Pathwise coordinate optimization . . . . 302--332
                  Zhijin Wu and   
             Rafael A. Irizarry   A statistical framework for the analysis
                                  of microarray probe-level data . . . . . 333--357
                  Bruce S. Weir   The rarity of DNA profiles . . . . . . . 358--370
Amy Berrington de González and   
                      D. R. Cox   Interpretation of interaction: a review  371--385
                    Art B. Owen   The pigeonhole bootstrap . . . . . . . . 386--411
              Galit Shmueli and   
             Ralph P. Russo and   
                  Wolfgang Jank   The BARISTA: a model for bid arrivals in
                                  online auctions  . . . . . . . . . . . . 412--441
                  Haiyan Wu and   
                  Ming Yuan and   
             Susan M. Kaech and   
          M. Elizabeth Halloran   A statistical analysis of memory CD8 T
                                  cell differentiation: an application of
                                  a hierarchical state space model to a
                                  short time course microarray experiment  442--458
                 Marc Coram and   
                       Hua Tang   Improving population-specific allele
                                  frequency estimates by adapting
                                  supplemental data: an empirical Bayes
                                  approach . . . . . . . . . . . . . . . . 459--479
                Gareth M. James   Curve alignment by moments . . . . . . . 480--501
          Elena A. Erosheva and   
        Stephen E. Fienberg and   
                Cyrille Joutard   Describing disability through
                                  individual-level mixture models for
                                  multivariate binary data . . . . . . . . 502--537
               Lev Klebanov and   
                Andrei Yakovlev   Diverse correlation structures in gene
                                  expression data and their utility in
                                  improving statistical inference  . . . . 538--559
                Ji Meng Loh and   
                  Zhengyuan Zhu   Accounting for spatial correlation in
                                  the scan statistic . . . . . . . . . . . 560--584
           John A. D. Aston and   
            Donald E. K. Martin   Distributions associated with general
                                  runs and patterns in hidden Markov
                                  models . . . . . . . . . . . . . . . . . 585--611
            Shane T. Jensen and   
                 Guang Chen and   
    Christian J. Stoeckert, Jr.   Bayesian variable selection and data
                                  integration for biological regulatory
                                  networks . . . . . . . . . . . . . . . . 612--633
              David M. Blei and   
               John D. Lafferty   A correlated topic model of
                                  \booktitleScience  . . . . . . . . . . . 634


Annals of Applied Statistics
Volume 2, Number 1, March, 2008

            Stephen E. Fienberg   Editorial: Statistics and ``The lost
                                  tomb of Jesus''  . . . . . . . . . . . . 1--2
             Andrey Feuerverger   Statistical analysis of an archeological
                                  find . . . . . . . . . . . . . . . . . . 3--54
             Stephen M. Stigler   Discussion of: ``Statistical analysis of
                                  an archeological find''  . . . . . . . . 55--56
                    Camil Fuchs   Discussion of: ``Statistical analysis of
                                  an archeological find''  . . . . . . . . 57--65
              Donald L. Bentley   Discussion of: Statistical analysis of
                                  an archaeological find . . . . . . . . . 66--73
                 Sheila M. Bird   Discussion of: ``Statistical analysis of
                                  an archeological find'' --- skeptical
                                  counting challenges to an archaeological
                                  find . . . . . . . . . . . . . . . . . . 74--76
        Holger Höfling and   
                Larry Wasserman   Discussion of: ``Statistical analysis of
                                  an archeological find''  . . . . . . . . 77--83
            Randall Ingermanson   Discussion of: ``Statistical analysis of
                                  an archaeological find'' . . . . . . . . 84--90
                 J. Mortera and   
                      P. Vicard   Discussion of: ``Statistical analysis of
                                  an archeological find''  . . . . . . . . 91--96
               Joseph B. Kadane   Discussion of: Bayesian views of an
                                  archaeological find  . . . . . . . . . . 97--98
             Andrey Feuerverger   Rejoinder of: ``Statistical analysis of
                                  an archeological find''  . . . . . . . . 99--112
              Lawrence D. Brown   In-season prediction of batting
                                  averages: a field test of empirical
                                  Bayes and Bayes methodologies  . . . . . 113--152
          Armin Schwartzman and   
        Robert F. Dougherty and   
             Jonathan E. Taylor   False discovery rate analysis of brain
                                  diffusion direction maps . . . . . . . . 153--175
              David A. Freedman   On regression adjustments in experiments
                                  with several treatments  . . . . . . . . 176--196
                  Bradley Efron   Simultaneous inference: When should
                                  hypothesis testing problems be combined? 197--223
               Tong Tong Wu and   
                  Kenneth Lange   Coordinate descent algorithms for lasso
                                  penalized regression . . . . . . . . . . 224--244
           Elizaveta Levina and   
               Adam Rothman and   
                         Ji Zhu   Sparse estimation of large covariance
                                  matrices via a nested Lasso penalty  . . 245--263
          Charles F. Manski and   
             Francesca Molinari   Skip sequencing: a decision problem in
                                  questionnaire design . . . . . . . . . . 264--285
           William T. Barry and   
            Andrew B. Nobel and   
                 Fred A. Wright   A statistical framework for testing
                                  functional categories in microarray data 286--315
    Maarten J. L. F. Cruyff and   
        Ulf Böckenholt and   
          Ardo van den Hout and   
    Peter G. M. van der Heijden   Accounting for self-protective responses
                                  in randomized response data from a
                                  social security survey using the
                                  zero-inflated Poisson model  . . . . . . 316--331
             Nancy R. Zhang and   
         Mary C. Wildermuth and   
               Terence P. Speed   Transcription factor binding site
                                  prediction with multivariate gene
                                  expression data  . . . . . . . . . . . . 332--365
         Tathagata Banerjee and   
                 Rahul Mukerjee   Optimal factorial designs for cDNA
                                  microarray experiments . . . . . . . . . 366--385
                     Li Qin and   
           Peter B. Gilbert and   
              Dean Follmann and   
                    Dongfeng Li   Assessing surrogate endpoints in vaccine
                                  trials with case-cohort sampling and the
                                  Cox model  . . . . . . . . . . . . . . . 386--407
                    Zhi Wei and   
                     Hongzhe Li   A hidden spatial-temporal Markov random
                                  field model for network-based analysis
                                  of time course gene expression data  . . 408--429
             John E. Fiorentino   Letter to the Editor . . . . . . . . . . 430--431
        Clifford Spiegelman and   
             S. J. Sheather and   
                W. A. Tobin and   
                W. D. James and   
                  S. Wexler and   
                D. M. Roundhill   Response to the Letter to the Editor . . 432--433

Annals of Applied Statistics
Volume 2, Number 2, June, 2008

                 Ann B. Lee and   
                Boaz Nadler and   
                Larry Wasserman   Treelets --- An adaptive multi-scale
                                  basis for sparse unordered data  . . . . 435--471
                  Fionn Murtagh   Discussion of: ``Treelets --- An
                                  adaptive multi-scale basis for sparse
                                  unordered data'' . . . . . . . . . . . . 472--473
            Peter J. Bickel and   
                  Ya'acov Ritov   Discussion of: ``Treelets --- An
                                  adaptive multi-scale basis for sparse
                                  unordered data'' . . . . . . . . . . . . 474--477
        Nicolai Meinshausen and   
            Peter Bühlmann   Discussion of: ``Treelets --- An
                                  adaptive multi-scale basis for sparse
                                  unordered data'' . . . . . . . . . . . . 478--481
              Robert Tibshirani   Discussion of: ``Treelets --- An
                                  adaptive multi-scale basis for sparse
                                  unordered data'' . . . . . . . . . . . . 482--483
                       Xing Qiu   Discussion of: ``Treelets --- An
                                  adaptive multi-scale basis for sparse
                                  unordered data'' . . . . . . . . . . . . 484--488
           Catherine Tuglus and   
           Mark J. van der Laan   Discussion of: ``Treelets --- An
                                  adaptive multi-scale basis for sparse
                                  unordered data'' . . . . . . . . . . . . 489--493
                 Ann B. Lee and   
                Boaz Nadler and   
                Larry Wasserman   Rejoinder of: ``Treelets --- An adaptive
                                  multi-scale basis for spare unordered
                                  data'' . . . . . . . . . . . . . . . . . 494--500
                      S. C. Kou   Stochastic modeling in nanoscale
                                  biophysics: Subdiffusion within proteins 501--535
              Andrew Gelman and   
              Cexun Jeffrey Cai   Should the Democrats move to the left on
                                  economic policy? . . . . . . . . . . . . 536--549
                Philip B. Stark   Conservative statistical post-election
                                  audits . . . . . . . . . . . . . . . . . 550--581
                   Lu Zheng and   
                   Marvin Zelen   Multi-center clinical trials:
                                  Randomization and ancillary statistics   582--600
               Haipeng Shen and   
               Jianhua Z. Huang   Forecasting time series of inhomogeneous
                                  Poisson processes with application to
                                  call center workforce management . . . . 601--623
             T. A. Buishand and   
                 L. de Haan and   
                        C. Zhou   On spatial extremes: With application to
                                  a rainfall problem . . . . . . . . . . . 624--642
        Holger Höfling and   
              Robert Tibshirani   A study of pre-validation  . . . . . . . 643--664
                Qingzhao Yu and   
        Elizabeth A. Stasny and   
                         Bin Li   Bayesian models to adjust for response
                                  bias in survey data for estimating rape
                                  and domestic violence rates from the
                                  NCVS . . . . . . . . . . . . . . . . . . 665--686
          Robert B. Scharpf and   
        Giovanni Parmigiani and   
           Jonathan Pevsner and   
                 Ingo Ruczinski   Hidden Markov models for the assessment
                                  of chromosomal alterations using
                                  high-throughput SNP arrays . . . . . . . 687--713
           Egil Ferkingstad and   
           Arnoldo Frigessi and   
           Håvard Rue and   
        Gudmar Thorleifsson and   
                 Augustine Kong   Unsupervised empirical Bayesian multiple
                                  testing with external covariates . . . . 714--735
               Xiaoxi Zhang and   
         Timothy D. Johnson and   
      Roderick J. A. Little and   
                        Yue Cao   Quantitative magnetic resonance image
                                  analysis via the EM algorithm with
                                  stochastic variation . . . . . . . . . . 736--755
           Sergio Venturini and   
         Francesca Dominici and   
            Giovanni Parmigiani   Gamma shape mixtures for heavy-tailed
                                  distributions  . . . . . . . . . . . . . 756--776

Annals of Applied Statistics
Volume 2, Number 3, September, 2008

             Persi Diaconis and   
                Sharad Goel and   
                   Susan Holmes   Horseshoes in multidimensional scaling
                                  and local kernel methods . . . . . . . . 777--807
                Donald B. Rubin   For objective causal inference, design
                                  trumps analysis  . . . . . . . . . . . . 808--840
            Hemant Ishwaran and   
           Udaya B. Kogalur and   
       Eugene H. Blackstone and   
               Michael S. Lauer   Random survival forests  . . . . . . . . 841--860
               P. L. Davies and   
                  U. Gather and   
                   M. Meise and   
                  D. Mergel and   
                T. Mildenberger   Residual-based localization and
                                  quantification of peaks in X-ray
                                  diffractograms . . . . . . . . . . . . . 861--886
                    Louis Lyons   Open statistical issues in Particle
                                  Physics  . . . . . . . . . . . . . . . . 887--915
         Jerome H. Friedman and   
              Bogdan E. Popescu   Predictive learning via rule ensembles   916--954
          L. Fraser Jackson and   
           Alistair G. Gray and   
            Stephen E. Fienberg   Sequential category aggregation and
                                  partitioning approaches for multi-way
                                  contingency tables based on survey and
                                  census data  . . . . . . . . . . . . . . 955--981
                Philip B. Stark   A sharper discrepancy measure for
                                  post-election audits . . . . . . . . . . 982--985
          Daniela M. Witten and   
              Robert Tibshirani   Testing significance of features by
                                  lassoed principal components . . . . . . 986--1012
                  Mary C. Meyer   Inference using shape-restricted
                                  regression splines . . . . . . . . . . . 1013--1033
           Beth Ann Griffin and   
        Daniel F. McCaffrey and   
               Andrew R. Morral   An application of principal
                                  stratification to control for
                                  institutionalization at follow-up in
                                  studies of substance abuse treatment
                                  programs . . . . . . . . . . . . . . . . 1034--1055
                   Jie Peng and   
         Hans-Georg Müller   Distance-based clustering of sparsely
                                  observed stochastic processes, with
                                  applications to online auctions  . . . . 1056--1077
       Cécile Ané   Analysis of comparative data with
                                  hierarchical autocorrelation . . . . . . 1078--1102
                 Steven D. Mark   A general formulation for
                                  standardization of rates as a method to
                                  control confounding by measured and
                                  unmeasured disease risk factors  . . . . 1103--1122
               D. Commenges and   
                A. Sayyareh and   
               L. Letenneur and   
                   J. Guedj and   
                     A. Bar-Hen   Estimating a difference of
                                  Kullback--Leibler risks using a
                                  normalized difference of AIC . . . . . . 1123--1142

Annals of Applied Statistics
Volume 2, Number 4, December, 2008

         Montserrat Fuentes and   
              Peter Guttorp and   
               Michael L. Stein   Special section on statistics in the
                                  atmospheric sciences . . . . . . . . . . 1143--1147
         Montserrat Fuentes and   
                Brian Reich and   
                     Gyuwon Lee   Spatial--temporal mesoscale modeling of
                                  rainfall intensity using gage and radar
                                  data . . . . . . . . . . . . . . . . . . 1148--1169
       Veronica J. Berrocal and   
          Adrian E. Raftery and   
               Tilmann Gneiting   Probabilistic quantitative precipitation
                                  field forecasting using a two-stage
                                  spatial model  . . . . . . . . . . . . . 1170--1193
                Huiyan Sang and   
            Alan E. Gelfand and   
              Chris Lennard and   
            Gabriele Hegerl and   
                 Bruce Hewitson   Interpreting self-organizing maps
                                  through space--time data models  . . . . 1194--1216
              Dorin Drignei and   
            Chris E. Forest and   
                    Doug Nychka   Parameter estimation for computationally
                                  intensive nonlinear regression with an
                                  application to climate modeling  . . . . 1217--1230
            Anders Malmberg and   
           Avelino Arellano and   
           David P. Edwards and   
              Natasha Flyer and   
                Doug Nychka and   
              Christopher Wikle   Interpolating fields of carbon monoxide
                                  data using a hybrid statistical-physical
                                  model  . . . . . . . . . . . . . . . . . 1231--1248
             Gavin Shaddick and   
                 Duncan Lee and   
             James V. Zidek and   
                    Ruth Salway   Estimating exposure response functions
                                  using ambient pollution concentrations   1249--1270
               Mikyoung Jun and   
               Michael L. Stein   Nonstationary covariance models for
                                  global data  . . . . . . . . . . . . . . 1271--1289
                    Hui Zou and   
                     Ji Zhu and   
                  Trevor Hastie   New multicategory boosting algorithms
                                  based on multicategory Fisher-consistent
                                  losses . . . . . . . . . . . . . . . . . 1290--1306
                  Qing Zhou and   
                 Wing Hung Wong   Reconstructing the energy landscape of a
                                  distribution from Monte Carlo samples    1307--1331
              Armin Schwartzman   Empirical null and false discovery rate
                                  inference for exponential families . . . 1332--1359
              Andrew Gelman and   
              Aleks Jakulin and   
        Maria Grazia Pittau and   
                     Yu-Sung Su   A weakly informative default prior
                                  distribution for logistic and other
                                  regression models  . . . . . . . . . . . 1360--1383
              Yangxin Huang and   
                         Tao Lu   Modeling long-term longitudinal HIV
                                  dynamics with application to an AIDS
                                  clinical study . . . . . . . . . . . . . 1384--1408
                  Yang Yang and   
              Peter Gilbert and   
        Ira M. Longini, Jr. and   
          M. Elizabeth Halloran   A Bayesian framework for estimating
                                  vaccine efficacy per infectious contact  1409--1431
                     Li Qin and   
                   Yuedong Wang   Nonparametric spectral analysis with
                                  applications to seizure characterization
                                  using EEG time series  . . . . . . . . . 1432--1451
      Isobel Claire Gormley and   
          Thomas Brendan Murphy   A mixture of experts model for rank data
                                  with applications in election studies    1452--1477
             Paul Gustafson and   
           Genevi\`eve Lefebvre   Bayesian multinomial regression with
                                  class-specific predictor selection . . . 1478--1502
              Hsieh Fushing and   
                     Li Zhu and   
      David I. Shapiro-Ilan and   
          James F. Campbell and   
                 Edwin E. Lewis   State-space based mass event-history
                                  model I: Many decision-making agents
                                  with one target  . . . . . . . . . . . . 1503--1522
           Tommaso Proietti and   
               Alessandra Luati   Real time estimation in local polynomial
                                  regression, with application to
                                  trend-cycle analysis . . . . . . . . . . 1523--1553
           Claire Cannamela and   
           Josselin Garnier and   
                 Bertrand Iooss   Controlled stratification for quantile
                                  estimation . . . . . . . . . . . . . . . 1554--1580


Annals of Applied Statistics
Volume 3, Number 1, March, 2009

           Thomas J. Loredo and   
                  John Rice and   
               Michael L. Stein   Introduction to papers on
                                  astrostatistics  . . . . . . . . . . . . 1--5
               Sarah Bridle and   
               Mandeep Gill and   
               Alan Heavens and   
          Catherine Heymans and   
            F. William High and   
              Henk Hoekstra and   
                Mike Jarvis and   
              Donnacha Kirk and   
            Thomas Kitching and   
            Jean-Paul Kneib and   
             Konrad Kuijken and   
          John Shawe-Taylor and   
            David Lagatutta and   
          Rachel Mandelbaum and   
             Richard Massey and   
            Yannick Mellier and   
           Baback Moghaddam and   
             Yassir Moudden and   
             Reiko Nakajima and   
 Stephane Paulin-Henriksson and   
             Sandrine Pires and   
               Anais Rassat and   
                 Adam Amara and   
        Alexandre Refregier and   
               Jason Rhodes and   
             Tim Schrabback and   
       Elisabetta Semboloni and   
            Marina Shmakova and   
       Ludovic van Waerbeke and   
            Dugan Witherick and   
                 Lisa Voigt and   
              David Wittman and   
          Douglas Applegate and   
         Sreekumar T. Balan and   
                 Joel Berge and   
             Gary Bernstein and   
                Hakon Dahle and   
                   Thomas Erben   Handbook for the GREAT08 Challenge: an
                                  image analysis competition for
                                  cosmological lensing . . . . . . . . . . 6--37
        Nicolai Meinshausen and   
               Peter Bickel and   
                      John Rice   Efficient blind search: Optimal power of
                                  detection under computational cost
                                  constraints  . . . . . . . . . . . . . . 38--60
              Paolo Cabella and   
             Domenico Marinucci   Statistical challenges in the analysis
                                  of Cosmic Microwave Background radiation 61--95
            Bodhisattva Sen and   
         Moulinath Banerjee and   
          Michael Woodroofe and   
                Mario Mateo and   
                 Matthew Walker   Streaming motion in Leo I  . . . . . . . 96--116
           David A. van Dyk and   
           Steven DeGennaro and   
               Nathan Stein and   
        William H. Jefferys and   
                 Ted von Hippel   Statistical analysis of stellar
                                  evolution  . . . . . . . . . . . . . . . 117--143
       Christopher Genovese and   
              Peter Freeman and   
            Larry Wasserman and   
              Robert Nichol and   
             Christopher Miller   Inference for the dark energy equation
                                  of state using Type IA supernova data    144--178
             Yoav Benjamini and   
                 Yulia Gavrilov   A simple forward selection procedure
                                  based on false discovery rate control    179--198
              Murray Aitkin and   
             Charles C. Liu and   
                   Tom Chadwick   Bayesian model comparison and model
                                  averaging for small-area estimation  . . 199--221
                 Ruiyan Luo and   
                    Bret Larget   Modeling substitution and indel
                                  processes for AFLP marker evolution and
                                  phylogenetic inference . . . . . . . . . 222--248
             Philippe Huber and   
           Olivier Scaillet and   
       Maria-Pia Victoria-Feser   Assessing multivariate predictors of
                                  financial market movements: a latent
                                  factor framework for ordinal data  . . . 249--271
               Michael L. Stein   Spatial interpolation of high-frequency
                                  monitoring data  . . . . . . . . . . . . 272--291
                  Mark Culp and   
         George Michailidis and   
                  Kjell Johnson   On multi-view learning with additive
                                  models . . . . . . . . . . . . . . . . . 292--318
        Carles Bretó and   
                  Daihai He and   
          Edward L. Ionides and   
                  Aaron A. King   Time series analysis via mechanistic
                                  models . . . . . . . . . . . . . . . . . 319--348
      Snigdhansu Chatterjee and   
                     Peihua Qiu   Distribution-free cumulative sum control
                                  charts using bootstrap-based control
                                  limits . . . . . . . . . . . . . . . . . 349--369
    Christopher J. Paciorek and   
            Jeff D. Yanosky and   
             Robin C. Puett and   
             Francine Laden and   
                   Helen H. Suh   Practical large-scale spatio-temporal
                                  modeling of particulate matter
                                  concentrations . . . . . . . . . . . . . 370--397
            Abhyuday Mandal and   
              Pritam Ranjan and   
                  C. F. Jeff Wu   $ \mathcal {G}$-SELC: Optimization by
                                  sequential elimination of level
                                  combinations using genetic algorithms
                                  and Gaussian processes . . . . . . . . . 398--421
      Yacine A\"\it-Sahalia and   
                      Jialin Yu   High frequency market microstructure
                                  noise estimates and liquidity measures   422--457
               Chong-Zhi Di and   
     Ciprian M. Crainiceanu and   
             Brian S. Caffo and   
              Naresh M. Punjabi   Multilevel functional principal
                                  component analysis . . . . . . . . . . . 458--488
          Donald B. Macnaughton   Letter to the Editor . . . . . . . . . . 489

Annals of Applied Statistics
Volume 3, Number 2, June, 2009

            Shane T. Jensen and   
         Kenneth E. Shirley and   
               Abraham J. Wyner   Bayesball: a Bayesian hierarchical model
                                  for evaluating fielding in major league
                                  baseball . . . . . . . . . . . . . . . . 491--520
               Jianqing Fan and   
                  Yang Feng and   
                      Yichao Wu   Network exploration via the adaptive
                                  LASSO and SCAD penalties . . . . . . . . 521--541
             Jorge R. Busch and   
           Pablo A. Ferrari and   
        Ana Georgina Flesia and   
            Ricardo Fraiman and   
      Sebastian P. Grynberg and   
             Florencia Leonardi   Testing statistical hypothesis on random
                                  trees and applications to the protein
                                  classification problem . . . . . . . . . 542--563
                Art B. Owen and   
               Patrick O. Perry   Bi-cross-validation of the SVD and the
                                  nonnegative matrix factorization . . . . 564--594
       Dankmar Böhning and   
    Peter G. M. van der Heijden   A covariate adjustment for
                                  zero-truncated approaches to estimating
                                  the size of hidden and elusive
                                  populations  . . . . . . . . . . . . . . 595--610
       Francesco Bartolucci and   
           Monia Lupparelli and   
           Giorgio E. Montanari   Latent Markov model for longitudinal
                                  binary data: An application to the
                                  performance evaluation of nursing homes  611--636
Céline Lévy-Leduc and   
         François Roueff   Detection and localization of
                                  change-points in high-dimensional
                                  network traffic data . . . . . . . . . . 637--662
               D. Fouskakis and   
               I. Ntzoufras and   
                      D. Draper   Bayesian variable selection using
                                  cost-adjusted BIC, with application to
                                  cost-effective measurement of quality of
                                  health care  . . . . . . . . . . . . . . 663--690
              Brenda Jenney and   
                    Sharon Lohr   Experimental designs for multiple-level
                                  responses, with application to a
                                  large-scale educational intervention . . 691--709
              Xi Kathy Zhou and   
           Merlise A. Clyde and   
              James Garrett and   
          Viridiana Lourdes and   
          Michael O'Connell and   
        Giovanni Parmigiani and   
            David J. Turner and   
                      Tim Wiles   Statistical methods for automated drug
                                  susceptibility testing: Bayesian minimum
                                  inhibitory concentration prediction from
                                  growth curves  . . . . . . . . . . . . . 710--730
             Peter J. Green and   
                  Julia Mortera   Sensitivity of inferences in forensic
                                  genetics to assumptions about founding
                                  genes  . . . . . . . . . . . . . . . . . 731--763
           Paul T. Edlefsen and   
               Chuanhai Liu and   
             Arthur P. Dempster   Estimating limits from Poisson counting
                                  data using Dempster--Shafer analysis . . 764--790
              Kyung-Ah Sohn and   
                   Eric P. Xing   A hierarchical Dirichlet process mixture
                                  model for haplotype reconstruction from
                                  multi-population data  . . . . . . . . . 791--821
         Ryan J. Tibshirani and   
              Robert Tibshirani   A bias correction for the minimum error
                                  rate in cross-validation . . . . . . . . 822--829
    Brisa N. Sánchez and   
Esben Budtz-Jòrgensen and   
                 Louise M. Ryan   An estimating equations approach to
                                  fitting latent exposure models with
                                  longitudinal health outcomes . . . . . . 830--856
                  Yili Hong and   
          William Q. Meeker and   
              James D. McCalley   Prediction of remaining life of power
                                  transformers based on left truncated and
                                  right censored lifetime data . . . . . . 857--879

Annals of Applied Statistics
Volume 3, Number 3, September, 2009

             Dylan S. Small and   
              Paul R. Rosenbaum   Error-free milestones in error prone
                                  measurements . . . . . . . . . . . . . . 881--901
                 E. Anderes and   
                      B. Yu and   
               V. Jovanovic and   
                 C. Moroney and   
                   M. Garay and   
               A. Braverman and   
                   E. Clothiaux   Maximum likelihood estimation of cloud
                                  height from multi-angle satellite
                                  imagery  . . . . . . . . . . . . . . . . 902--921
                  Bradley Efron   Are a set of microarrays independent of
                                  each other?  . . . . . . . . . . . . . . 922--942
              Shengde Liang and   
          Bradley P. Carlin and   
                Alan E. Gelfand   Analysis of Minnesota colon and rectum
                                  cancer point patterns with spatial and
                                  nonspatial covariate information . . . . 943--962
                      Ming Yuan   State price density estimation via
                                  nonparametric mixtures . . . . . . . . . 963--984
         Andrey A. Shabalin and   
          Victor J. Weigman and   
           Charles M. Perou and   
                Andrew B. Nobel   Finding large average submatrices in
                                  high dimensional data  . . . . . . . . . 985--1012
                 Peihua Qiu and   
                  Rong Yang and   
                Michael Potegal   Statistical modeling of the time course
                                  of tantrum anger . . . . . . . . . . . . 1013--1034
                  David Rossell   GaGa: a parsimonious and flexible model
                                  for differential expression analysis . . 1035--1051
           Andrew O. Finley and   
           Sudipto Banerjee and   
            Ronald E. McRoberts   Hierarchical spatial models for
                                  predicting tree species assemblages
                                  across large domains . . . . . . . . . . 1052--1079
            Shane T. Jensen and   
              Ibrahim Erkan and   
        Erna S. Arnardottir and   
                 Dylan S. Small   Bayesian testing of many hypotheses $
                                  \times $ many genes: a study of sleep
                                  apnea  . . . . . . . . . . . . . . . . . 1080--1101
              Ian L. Dryden and   
          Alexey Koloydenko and   
                     Diwei Zhou   Non-Euclidean statistics for covariance
                                  matrices, with applications to diffusion
                                  tensor imaging . . . . . . . . . . . . . 1102--1123
                Sungduk Kim and   
                 Yingmei Xi and   
                  Ming-Hui Chen   A new latent cure rate marker model for
                                  survival data  . . . . . . . . . . . . . 1124--1146
          Erkan Ozge Buzbas and   
                     Paul Joyce   Maximum likelihood estimates under
                                  $k$-allele models with selection can be
                                  numerically unstable . . . . . . . . . . 1147--1162
             Elizabeth R. Brown   Assessing the association between trends
                                  in a biomarker and risk of event with an
                                  application in pediatric HIV/AIDS  . . . 1163--1182
            W. Evan Johnson and   
             X. Shirley Liu and   
                     Jun S. Liu   Doubly stochastic continuous-time hidden
                                  Markov approach for analyzing genome
                                  tiling arrays  . . . . . . . . . . . . . 1183--1203
              Asger Hobolth and   
                  Eric A. Stone   Simulation from endpoint-conditioned,
                                  continuous-time Markov chains on a
                                  finite state space, with applications to
                                  molecular evolution  . . . . . . . . . . 1204--1231

Annals of Applied Statistics
Volume 3, Number 4, December, 2009

              Michael A. Newton   Introducing the discussion paper by
                                  Székely and Rizzo . . . . . . . . . . . . 1233--1235
Gábor J. Székely and   
                 Maria L. Rizzo   Brownian distance covariance . . . . . . 1236--1265
            Peter J. Bickel and   
                        Ying Xu   Discussion of: Brownian distance
                                  covariance . . . . . . . . . . . . . . . 1266--1269
             Michael R. Kosorok   Discussion of: Brownian distance
                                  covariance . . . . . . . . . . . . . . . 1270--1278
                    Leslie Cope   Discussion of: Brownian distance
                                  covariance . . . . . . . . . . . . . . . 1279--1281
             Andrey Feuerverger   Discussion of: Brownian distance
                                  covariance . . . . . . . . . . . . . . . 1282--1284
             Arthur Gretton and   
             Kenji Fukumizu and   
       Bharath K. Sriperumbudur   Discussion of: Brownian distance
                                  covariance . . . . . . . . . . . . . . . 1285--1294
         Bruno Rémillard   Discussion of: Brownian distance
                                  covariance . . . . . . . . . . . . . . . 1295--1298
        Christopher R. Genovese   Discussion of: Brownian distance
                                  covariance . . . . . . . . . . . . . . . 1299--1302
Gábor J. Székely and   
                 Maria L. Rizzo   Rejoinder: Brownian distance covariance  1303--1308
          Keith A. Baggerly and   
               Kevin R. Coombes   Deriving chemosensitivity from cell
                                  lines: Forensic bioinformatics and
                                  reproducible research in high-throughput
                                  biology  . . . . . . . . . . . . . . . . 1309--1334
            Herman Chernoff and   
                Shaw-Hwa Lo and   
                     Tian Zheng   Discovering influential variables: a
                                  method of partitions . . . . . . . . . . 1335--1369
              Edward Mulrow and   
             Hee-Choon Shin and   
                 Fritz Scheuren   Assessing uncertainty in the American
                                  Indian Trust Fund  . . . . . . . . . . . 1370--1381
              Yingchun Zhou and   
                  Nell Sedransk   Functional data analytic approach of
                                  modeling ECG T-wave shape to measure
                                  cardiovascular behavior  . . . . . . . . 1382--1402
         Sivan Aldor-Noiman and   
             Paul D. Feigin and   
             Avishai Mandelbaum   Workload forecasting for a call center:
                                  Methodology and a case study . . . . . . 1403--1447
              Sarat C. Dass and   
                     Mingfei Li   Hierarchical mixture models for
                                  assessing fingerprint individuality  . . 1448--1466
          Josue G. Martinez and   
           Jianhua Z. Huang and   
        Robert C. Burghardt and   
              Rola Barhoumi and   
             Raymond J. Carroll   Use of multiple singular value
                                  decompositions to analyze complex
                                  intracellular calcium ion signals  . . . 1467--1492
                 Tucker McElroy   Incompatibility of trends in multi-year
                                  estimates from the American Community
                                  Survey . . . . . . . . . . . . . . . . . 1493--1504
          Jan van den Broek and   
               Hiroshi Nishiura   Using epidemic prevalence data to
                                  jointly estimate reproduction and
                                  removal  . . . . . . . . . . . . . . . . 1505--1520
           David A. Orlando and   
      Edwin S. Iversen, Jr. and   
     Alexander J. Hartemink and   
                Steven B. Haase   A branching process model for flow
                                  cytometry and budding index measurements
                                  in cell synchrony experiments  . . . . . 1521--1541
               Li-Chu Chien and   
               I-Shou Chang and   
           Shih Sheng Jiang and   
            Pramod K. Gupta and   
              Chi-Chung Wen and   
                Yuh-Jenn Wu and   
                 Chao A. Hsiung   Profiling time course expression of
                                  virus genes --- an illustration of
                                  Bayesian inference under shape
                                  restrictions . . . . . . . . . . . . . . 1542--1565
               Michiel Debruyne   An outlier map for Support Vector
                                  Machine classification . . . . . . . . . 1566--1580
          Nozer D. Singpurwalla   The utility of reliability and survival  1581--1596
         Burcu Aydìn and   
        Gábor Pataki and   
                Haonan Wang and   
          Elizabeth Bullitt and   
                   J. S. Marron   A principal component analysis for trees 1597--1615
              Iain M. Johnstone   Approximate null distribution of the
                                  largest root in multivariate analysis    1616--1633
              Xingdong Feng and   
                      Xuming He   Inference on low-rank data matrices with
                                  applications to microarray data  . . . . 1634--1654
                 James G. Scott   Nonparametric Bayesian multiple testing
                                  for longitudinal performance
                                  stratification . . . . . . . . . . . . . 1655--1674
                Daniel Merl and   
         Julia Ling-Yu Chen and   
               Jen-Tsan Chi and   
                      Mike West   An integrative analysis of cancer gene
                                  expression studies using Bayesian latent
                                  factor modeling  . . . . . . . . . . . . 1675--1694
                 Youyi Fong and   
              Peter Guttorp and   
                 Janis Abkowitz   Bayesian inference and model choice in a
                                  hidden stochastic two-compartment model
                                  of hematopoietic stem cell fate
                                  decisions  . . . . . . . . . . . . . . . 1695--1709
                    Wei-Yin Loh   Improving the precision of
                                  classification trees . . . . . . . . . . 1710--1737
                  Ming Yuan and   
           V. Roshan Joseph and   
                        Hui Zou   Structured variable selection and
                                  estimation . . . . . . . . . . . . . . . 1738--1757
                 Daniel Gervini   Detecting and handling outlying
                                  trajectories in irregularly sampled
                                  functional datasets  . . . . . . . . . . 1758--1775
                Fabio Rigat and   
                   Jim Q. Smith   Semi-parametric dynamic time series
                                  modelling with applications to detecting
                                  neural dynamics  . . . . . . . . . . . . 1776--1804
                Yufen Zhang and   
            James S. Hodges and   
               Sudipto Banerjee   Smoothed ANOVA with spatial effects as a
                                  competitor to MCAR in multivariate
                                  spatial smoothing  . . . . . . . . . . . 1805--1830


Annals of Applied Statistics
Volume 4, Number 1, March, 2010

            Stephen E. Fienberg   Introduction to papers on the modeling
                                  and analysis of network data . . . . . . 1--4
           Mark S. Handcock and   
                 Krista J. Gile   Modeling social networks from sampled
                                  data . . . . . . . . . . . . . . . . . . 5--25
              Cheolwoo Park and   
Felix Hernández-Campos and   
               J. S. Marron and   
               Kevin Jeffay and   
              F. Donelson Smith   Analysis of dependence among size, rate
                                  and duration in Internet flows . . . . . 26--52
                   Jie Peng and   
                     Ji Zhu and   
           Anna Bergamaschi and   
                Wonshik Han and   
             Dong-Young Noh and   
        Jonathan R. Pollack and   
                       Pei Wang   Regularized multivariate regression for
                                  identifying master predictors with
                                  application to integrative genomics
                                  study of breast cancer . . . . . . . . . 53--77
              Harsh Singhal and   
             George Michailidis   Optimal experiment design in a filtering
                                  context with application to sampled
                                  network data . . . . . . . . . . . . . . 78--93
               Mladen Kolar and   
                    Le Song and   
                  Amr Ahmed and   
                   Eric P. Xing   Estimating time-varying networks . . . . 94--123
             Jonathan Chang and   
                  David M. Blei   Hierarchical relational models for
                                  document networks  . . . . . . . . . . . 124--150
              Wolfgang Jank and   
                    Inbal Yahav   E-loyalty networks in online auctions    151--178
                 Ann B. Lee and   
                 Diana Luca and   
                 Kathryn Roeder   A spectral graph approach to discovering
                                  genetic ancestry . . . . . . . . . . . . 179--202
  Mária Süveges and   
             Anthony C. Davison   Model misspecification in peaks over
                                  threshold analysis . . . . . . . . . . . 203--221
    Bhojnarine R. Rambharat and   
           Anthony E. Brockwell   Sequential Monte Carlo pricing of
                                  American-style options under stochastic
                                  volatility models  . . . . . . . . . . . 222--265
            Hugh A. Chipman and   
           Edward I. George and   
            Robert E. McCulloch   BART: Bayesian additive regression trees 266--298
                    QiQi Lu and   
                Robert Lund and   
               Thomas C. M. Lee   An MDL approach to the climate
                                  segmentation problem . . . . . . . . . . 299--319
         Elias Chaibub Neto and   
             Mark P. Keller and   
              Alan D. Attie and   
               Brian S. Yandell   Causal graphical models in systems
                                  genetics: a unified framework for joint
                                  inference of causal network and genetic
                                  architecture for correlated phenotypes   320--339
             Tian Siva Tian and   
            Gareth M. James and   
                 Rand R. Wilcox   A multivariate adaptive stochastic
                                  search method for dimensionality
                                  reduction in classification  . . . . . . 340--365
         Kenneth E. Shirley and   
             Dylan S. Small and   
             Kevin G. Lynch and   
          Stephen A. Maisto and   
                 David W. Oslin   Hidden Markov models for alcoholism
                                  treatment trial data . . . . . . . . . . 366--395
      Thomas Brendan Murphy and   
                  Nema Dean and   
              Adrian E. Raftery   Variable selection and updating in
                                  model-based discriminant analysis for
                                  high dimensional data with food
                                  authenticity applications  . . . . . . . 396--421
             Omkar Muralidharan   An empirical Bayes mixture method for
                                  effect size and false discovery rate
                                  estimation . . . . . . . . . . . . . . . 422--438
             Brian J. Reich and   
         Dipankar Bandyopadhyay   A latent factor model for spatial data
                                  with informative missingness . . . . . . 439--459
                  Hua Liang and   
                Hongyu Miao and   
                       Hulin Wu   Estimation of constant and time-varying
                                  dynamic parameters of HIV infection in a
                                  nonlinear differential equation model    460--483
Elizabeth C. Mannshardt-Shamseldin and   
           Richard L. Smith and   
            Stephan R. Sain and   
            Linda O. Mearns and   
                  Daniel Cooley   Downscaling extremes: a comparison of
                                  extreme value distributions in
                                  point-source and gridded precipitation
                                  data . . . . . . . . . . . . . . . . . . 484--502
       Miika Ahdesmäki and   
             Korbinian Strimmer   Feature selection in omics prediction
                                  problems using cat scores and false
                                  nondiscovery rate control  . . . . . . . 503--519
                   Rui Wang and   
                    Lu Tian and   
                 Tianxi Cai and   
                      L. J. Wei   Nonparametric inference procedure for
                                  percentiles of the random effects
                                  distribution in meta-analysis  . . . . . 520--532

Annals of Applied Statistics
Volume 4, Number 2, June, 2010

            Stephen E. Fienberg   Introduction to papers on the modeling
                                  and analysis of network data --- II  . . 533--534
               Eric P. Xing and   
                  Wenjie Fu and   
                        Le Song   A state-space mixed membership
                                  blockmodel for dynamic network
                                  tomography . . . . . . . . . . . . . . . 535--566
         Tom A. B. Snijders and   
             Johan Koskinen and   
          Michael Schweinberger   Maximum likelihood estimation for social
                                  network dynamics . . . . . . . . . . . . 567--588
                      Ya Xu and   
             Justin S. Dyer and   
                    Art B. Owen   Empirical stationary correlations for
                                  semi-supervised learning on graphs . . . 589--614
              Ricardo Silva and   
           Katherine Heller and   
          Zoubin Ghahramani and   
             Edoardo M. Airoldi   Ranking relations using analogies in
                                  biological and information networks  . . 615--644
          Nicholas A. Heard and   
            David J. Weston and   
         Kiriaki Platanioti and   
                  David J. Hand   Bayesian anomaly detection methods for
                                  social networks  . . . . . . . . . . . . 645--662
            Gareth M. James and   
             Chiara Sabatti and   
              Nengfeng Zhou and   
                         Ji Zhu   Sparse regulatory networks . . . . . . . 663--686
                Hugo Zanghi and   
              Franck Picard and   
              Vincent Miele and   
            Christophe Ambroise   Strategies for online inference of
                                  model-based clustering in large and
                                  growing networks . . . . . . . . . . . . 687--714
       Mahendra Mariadassou and   
      Stéphane Robin and   
                 Corinne Vacher   Uncovering latent structure in valued
                                  graphs: A variational approach . . . . . 715--742
                 Anat Sakov and   
                Ilan Golani and   
               Dina Lipkind and   
                 Yoav Benjamini   High-throughput data analysis in
                                  behavior genetics  . . . . . . . . . . . 743--763
          Genevera I. Allen and   
              Robert Tibshirani   Transposable regularized covariance
                                  models with an application to missing
                                  data imputation  . . . . . . . . . . . . 764--790
           Michael R. Huber and   
           Rodney X. Sturdivant   Building a model for scoring 20 or more
                                  runs in a baseball game  . . . . . . . . 791--804
     Dipankar Bandyopadhyay and   
            Debajyoti Sinha and   
             Stuart Lipsitz and   
           Elizabeth Letourneau   Changing approaches of prosecutors
                                  towards juvenile repeated sex-offenders:
                                  a Bayesian evaluation  . . . . . . . . . 805--829
                John Hughes and   
                John Fricks and   
                William Hancock   Likelihood inference for particle
                                  location in fluorescence microscopy  . . 830--848
           Carrie A. Hosman and   
              Ben B. Hansen and   
                Paul W. Holland   The sensitivity of linear regression
                                  coefficients' confidence limits to the
                                  omission of a confounder . . . . . . . . 849--870
           Audrey Qiuyan Fu and   
          Diane P. Genereux and   
       Reinhard Stöger and   
           Charles D. Laird and   
               Matthew Stephens   Statistical inference of transmission
                                  fidelity of DNA methylation patterns
                                  over somatic cell divisions in mammals   871--892
              Woncheol Jang and   
                    Ji Meng Loh   Density estimation for grouped data with
                                  application to line transect sampling    893--915
          Kristin P. Lennox and   
              David B. Dahl and   
            Marina Vannucci and   
                   Ryan Day and   
                  Jerry W. Tsai   A Dirichlet process mixture of hidden
                                  Markov models for protein structure
                                  prediction . . . . . . . . . . . . . . . 916--942
        Kimberly F. Sellers and   
                  Galit Shmueli   A flexible regression model for count
                                  data . . . . . . . . . . . . . . . . . . 943--961
                  Qunhua Li and   
         Michael J. MacCoss and   
               Matthew Stephens   A nested mixture model for protein
                                  identification using mass spectrometry   962--987
                Xiaodan Fan and   
           Saumyadipta Pyne and   
                     Jun S. Liu   Bayesian meta-analysis for identifying
                                  periodically expressed genes in fission
                                  yeast cell cycle . . . . . . . . . . . . 988--1013
                    Wei Sun and   
                 Fred A. Wright   A geometric interpretation of the
                                  permutation $p$-value and its
                                  application in eQTL studies  . . . . . . 1014--1033
             Maria L. Rizzo and   
 Gábor J. Székely   DISCO analysis: a nonparametric
                                  extension of analysis of variance  . . . 1034--1055
             Martin Slawski and   
        Wolfgang zu Castell and   
                   Gerhard Tutz   Feature selection guided by structural
                                  information  . . . . . . . . . . . . . . 1056--1080
     Stergios B. Fotopoulos and   
       Venkata K. Jandhyala and   
                Elena Khapalova   Exact asymptotic distribution of
                                  change-point mle for change in the mean
                                  of Gaussian sequences  . . . . . . . . . 1081--1104
         Jan van den Brakel and   
                    Joeri Roels   Intervention analysis with state-space
                                  models to estimate discontinuities due
                                  to a survey redesign . . . . . . . . . . 1105--1138

Annals of Applied Statistics
Volume 4, Number 3, September, 2010

           George Woodworth and   
                  Joseph Kadane   Age- and time-varying proportional
                                  hazards models for employment
                                  discrimination . . . . . . . . . . . . . 1139--1157
               Xiaoquan Wen and   
               Matthew Stephens   Using linear predictors to impute allele
                                  frequencies from summary or pooled
                                  genotype data  . . . . . . . . . . . . . 1158--1182
                 Yiping Dou and   
                  Nhu D. Le and   
                 James V. Zidek   Modeling hourly ozone concentration
                                  fields . . . . . . . . . . . . . . . . . 1183--1213
                 Gengxin Li and   
                     Yuehua Cui   A general statistical framework for
                                  dissecting parent-of-origin effects
                                  underlying endosperm traits in flowering
                                  plants . . . . . . . . . . . . . . . . . 1214--1233
             Brian Kriegler and   
                   Richard Berk   Small area estimation of the homeless in
                                  Los Angeles: an application of
                                  cost-sensitive stochastic gradient
                                  boosting . . . . . . . . . . . . . . . . 1234--1255
        Siddhartha R. Dalal and   
                       Bing Han   Detection of radioactive material
                                  entering national ports: a Bayesian
                                  approach to radiation portal data  . . . 1256--1271
            James M. Kilner and   
                Karl J. Friston   Topological inference for EEG and MEG    1272--1290
             Natalie Shlomo and   
                  Chris Skinner   Assessing the protection provided by
                                  misclassification-based disclosure
                                  limitation methods for survey microdata  1291--1310
                    Ada Lau and   
               Patrick McSharry   Approaches for multi-step density
                                  forecasts with application to aggregated
                                  wind power . . . . . . . . . . . . . . . 1311--1341
          Melanie A. Wilson and   
           Edwin S. Iversen and   
           Merlise A. Clyde and   
         Scott C. Schmidler and   
         Joellen M. Schildkraut   Bayesian model search and multilevel
                                  inference for SNP association studies    1342--1364
     Kingshuk Roy Choudhury and   
               Limian Zheng and   
               John J. Mackrill   Analysis of spatial distribution of
                                  marker expression in cells using
                                  boundary distance plots  . . . . . . . . 1365--1382
            David I. Warton and   
               Leah C. Shepherd   Poisson point process models solve the
                                  ``pseudo-absence problem'' for
                                  presence-only data in ecology  . . . . . 1383--1402
        Avishek Chakraborty and   
            Alan E. Gelfand and   
             Adam M. Wilson and   
          Andrew M. Latimer and   
          John A. Silander, Jr.   Modeling large scale species abundance
                                  with latent spatial processes  . . . . . 1403--1429
               Holger Dette and   
          Andrey Pepelyshev and   
               Tim Holland-Letz   Optimal designs for random effect models
                                  with correlated errors with applications
                                  in population pharmacokinetics . . . . . 1430--1450
                 Yijie Zhou and   
         Francesca Dominici and   
                Thomas A. Louis   A smoothing approach for masking spatial
                                  data . . . . . . . . . . . . . . . . . . 1451--1475
          Andrea S. Foulkes and   
               Livio Azzoni and   
                Xiaohong Li and   
        Margaret A. Johnson and   
              Colette Smith and   
              Karam Mounzer and   
               Luis J. Montaner   Prediction-based classification for
                                  longitudinal biomarkers  . . . . . . . . 1476--1497
                  Caiyan Li and   
                     Hongzhe Li   Variable selection and regression
                                  analysis for graph-structured covariates
                                  with an application to genomics  . . . . 1498--1516
             Paul S. Albert and   
                 Joanna H. Shih   An approach for jointly modeling
                                  multivariate longitudinal measurements
                                  and discrete time-to-event data  . . . . 1517--1532
          Pepa Ramirez-Cobo and   
              Rosa E. Lillo and   
               Simon Wilson and   
               Michael P. Wiper   Bayesian inference for double Pareto
                                  lognormal queues . . . . . . . . . . . . 1533--1557
            J. L. Wadsworth and   
                 J. A. Tawn and   
                    P. Jonathan   Accounting for choice of measurement
                                  scale in extreme value modeling  . . . . 1558--1578
                 Seokho Lee and   
           Jianhua Z. Huang and   
                     Jianhua Hu   Sparse logistic principal components
                                  analysis for binary data . . . . . . . . 1579--1601
       Kwun Chuen Gary Chan and   
                 Mei-Cheng Wang   Backward estimation of stochastic
                                  processes with failure events as time
                                  origins  . . . . . . . . . . . . . . . . 1602--1620

Annals of Applied Statistics
Volume 4, Number 4, December, 2010

                   Adele Cutler   Remembering Leo Breiman  . . . . . . . . 1621--1633
                Peter J. Bickel   Leo Breiman: an important intellectual
                                  and personal force in statistics, my
                                  life and that of many others . . . . . . 1634--1637
            Peter Bühlmann   Remembrance of Leo Breiman . . . . . . . 1638--1641
              Michael I. Jordan   Leo Breiman  . . . . . . . . . . . . . . 1642--1643
              Richard A. Olshen   Remembering Leo Breiman  . . . . . . . . 1644--1648
             Jerome H. Friedman   Remembering Leo  . . . . . . . . . . . . 1649--1651
               Charles J. Stone   Selected recollections of my
                                  relationship with Leo Breiman  . . . . . 1652--1655
                  Jacob Feldman   Leo and me . . . . . . . . . . . . . . . 1656
                         Bin Yu   Remembering Leo  . . . . . . . . . . . . 1657--1659
            Peter J. Bickel and   
               Nathan Boley and   
             James B. Brown and   
               Haiyan Huang and   
                 Nancy R. Zhang   Subsampling methods for genomic
                                  inference  . . . . . . . . . . . . . . . 1660--1697
               Tong Tong Wu and   
                  Kenneth Lange   Multicategory vertex discriminant
                                  analysis for high-dimensional data . . . 1698--1721
            Jennifer A. Tom and   
        Janet S. Sinsheimer and   
                Marc A. Suchard   Reuse, recycle, reweigh: Combating
                                  influenza through efficient sequential
                                  Bayesian computation for massive data    1722--1748
            Zhongyang Zhang and   
              Kenneth Lange and   
                Roel Ophoff and   
                 Chiara Sabatti   Reconstructing DNA copy number by
                                  penalized estimation and imputation  . . 1749--1773
           D. James Greiner and   
                 Kevin M. Quinn   Exit polling and racial bloc voting:
                                  Combining individual-level and R $
                                  \times $ C ecological data . . . . . . . 1774--1796
      Yuliya V. Karpievitch and   
        Ashoka D. Polpitiya and   
         Gordon A. Anderson and   
           Richard D. Smith and   
                 Alan R. Dabney   Liquid chromatography mass
                                  spectrometry-based proteomics:
                                  Biological and technological aspects . . 1797--1823
Dominique-Laurent Couturier and   
       Maria-Pia Victoria-Feser   Zero-inflated truncated generalized
                                  Pareto distribution for the analysis of
                                  radio audience data  . . . . . . . . . . 1824--1846
               J. Drylewicz and   
                   J. Guedj and   
               D. Commenges and   
             R. Thiébaut   Modeling the dynamics of biomarkers
                                  during primary HIV infection taking into
                                  account the uncertainty of infection
                                  date . . . . . . . . . . . . . . . . . . 1847--1870
           Nicolai Bissantz and   
              Hajo Holzmann and   
               Miros\law Pawlak   Improving PSF calibration in confocal
                                  microscopic imaging --- estimating and
                                  exploiting bilateral symmetry  . . . . . 1871--1891
            Mohammed Haddou and   
          Louis-Paul Rivest and   
           Michael Pierrynowski   A nonlinear mixed effects directional
                                  model for the estimation of the rotation
                                  axes of the human ankle  . . . . . . . . 1892--1912
             Tingting Zhang and   
                      S. C. Kou   Nonparametric inference of doubly
                                  stochastic Poisson process data via the
                                  kernel method  . . . . . . . . . . . . . 1913--1941
       Veronica J. Berrocal and   
            Alan E. Gelfand and   
               David M. Holland   A bivariate space--time downscaler under
                                  space and time misalignment  . . . . . . 1942--1975
                  Samiran Ghosh   An imputation-based approach for
                                  parameter estimation in the presence of
                                  ambiguous censoring with application in
                                  industrial supply chain  . . . . . . . . 1976--1999
                   Xia Wang and   
                   Dipak K. Dey   Generalized extreme value regression for
                                  binary response data: an application to
                                  B2B electronic payments system adoption  2000--2023
        Francesco C. Stingo and   
               Yian A. Chen and   
            Marina Vannucci and   
           Marianne Barrier and   
               Philip E. Mirkes   A Bayesian graphical modeling approach
                                  to microRNA regulatory network inference 2024--2048
            Nicolai Meinshausen   Node harvest . . . . . . . . . . . . . . 2049--2072
       Luciano I. de Castro and   
               Harry J. Paarsch   Testing affiliation in private-values
                                  models of first-price auctions using
                                  grid distributions . . . . . . . . . . . 2073--2098
             Adam A. Szpiro and   
            Kenneth M. Rice and   
                  Thomas Lumley   Model-robust regression and a Bayesian
                                  ``sandwich'' estimator . . . . . . . . . 2099--2113
                  Xuming He and   
                 Ya-Hui Hsu and   
                     Mingxiu Hu   Detection of treatment effects by
                                  covariate-adjusted expected shortfall    2114--2125
             Alejandro Jara and   
          Emmanuel Lesaffre and   
             Maria De Iorio and   
              Fernando Quintana   Bayesian semiparametric inference for
                                  multivariate doubly-interval-censored
                                  data . . . . . . . . . . . . . . . . . . 2126--2149
              Jan Gertheiss and   
                   Gerhard Tutz   Sparse modeling of categorial
                                  explanatory variables  . . . . . . . . . 2150--2180
              Brian Francis and   
            Regina Dittrich and   
             Reinhold Hatzinger   Modeling heterogeneity in ranked
                                  responses by nonparametric maximum
                                  likelihood: How do Europeans get their
                                  scientific knowledge?  . . . . . . . . . 2181--2202
            David I. Warton and   
               Leah C. Shepherd   Correction note: Poisson point process
                                  models solve the ``pseudo-absence
                                  problem'' for presence-only data in
                                  ecology  . . . . . . . . . . . . . . . . 2203--2204
                    Ada Lau and   
               Patrick McSharry   Correction note: ``Approaches for
                                  multi-step density forecasts with
                                  application to aggregated wind power''   2205
             Jerry Friedman and   
                         Bin Yu   Leo Breiman (1929--2005) . . . . . . . . ??


Annals of Applied Statistics
Volume 5, Number 1, March, 2011

               Michael L. Stein   Editorial  . . . . . . . . . . . . . . . 1--4
        Blakeley B. McShane and   
               Abraham J. Wyner   A statistical analysis of multiple
                                  temperature proxies: Are reconstructions
                                  of surface temperatures over the last
                                  1000 years reliable? . . . . . . . . . . 5--44
               L. Mark Berliner   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 45--46
                  Alexey Kaplan   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 47--51
           Richard A. Davis and   
                   Jingchen Liu   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 52--55
           Stephen McIntyre and   
                 Ross McKitrick   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 56--60
               Murali Haran and   
                Nathan M. Urban   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 61--64
           Gavin A. Schmidt and   
            Michael E. Mann and   
            Scott D. Rutherford   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 65--70
           Lasse Holmström   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 71--75
               Jason E. Smerdon   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 76--79
                Doug Nychka and   
                          Bo Li   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 80--82
              Martin P. Tingley   Spurious predictions with random time
                                  series: The Lasso in the context of
                                  paleoclimatic reconstructions.
                                  Discussion of: A statistical analysis of
                                  multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable? . . . 83--87
            Peter Craigmile and   
                Bala Rajaratnam   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 88--90
             Eugene R. Wahl and   
               Caspar M. Ammann   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 91--95
               Jonathan Rougier   Discussion of: ``A statistical analysis
                                  of multiple temperature proxies: Are
                                  reconstructions of surface temperatures
                                  over the last 1000 years reliable?'' . . 96--98
        Blakeley B. McShane and   
               Abraham J. Wyner   Rejoinder  . . . . . . . . . . . . . . . 99--123
        Chaitra H. Nagaraja and   
          Lawrence D. Brown and   
                  Linda H. Zhao   An autoregressive approach to house
                                  price modeling . . . . . . . . . . . . . 124--149
            Stephan R. Sain and   
            Reinhard Furrer and   
                   Noel Cressie   A spatial analysis of multivariate
                                  output from regional climate models  . . 150--175
                 Mengxin Li and   
                   Wei-Liem Loh   Estimating the number of neurons in
                                  multi-neuronal spike trains  . . . . . . 176--200
                  Lizhen Xu and   
              Radu V. Craiu and   
                        Lei Sun   Bayesian methods to overcome the
                                  winner's curse in genetic studies  . . . 201--231
            Patrick Breheny and   
                     Jian Huang   Coordinate descent algorithms for
                                  nonconvex penalized regression, with
                                  applications to biological feature
                                  selection  . . . . . . . . . . . . . . . 232--253
             Charles Sutton and   
              Michael I. Jordan   Bayesian inference for queueing networks
                                  and modeling of Internet services  . . . 254--282
       Jeffrey S. Rosenthal and   
                 Albert H. Yoon   Detecting multiple authorship of United
                                  States Supreme Court legal decisions
                                  using function words . . . . . . . . . . 283--308
            Pierre Latouche and   
     Etienne Birmelé and   
            Christophe Ambroise   Overlapping stochastic block models with
                                  application to the French political
                                  blogosphere  . . . . . . . . . . . . . . 309--336
             Jeff Goldsmith and   
                Brian Caffo and   
        Ciprian Crainiceanu and   
               Daniel Reich and   
                    Yong Du and   
                  Craig Hendrix   Nonlinear tube-fitting for the analysis
                                  of anatomical and functional structures  337--363
           Jonathan Gelfond and   
           Lee Ann Zarzabal and   
               Tarea Burton and   
              Suzanne Burns and   
               Mari Sogayar and   
             Luiz O. F. Penalva   Latent rank change detection for
                                  analysis of splice-junction microarrays
                                  with nonlinear effects . . . . . . . . . 364--380
    Christopher P. Saunders and   
             Linda J. Davis and   
            Andrea C. Lamas and   
             John J. Miller and   
                Donald T. Gantz   Construction and evaluation of
                                  classifiers for forensic document
                                  analysis . . . . . . . . . . . . . . . . 381--399
                      Li Su and   
                Joseph W. Hogan   HIV dynamics and natural history
                                  studies: Joint modeling with doubly
                                  interval-censored event time and
                                  infrequent longitudinal data . . . . . . 400--426
            Peter Radchenko and   
                Gareth M. James   Improved variable selection with
                                  Forward-Lasso adaptive shrinkage . . . . 427--448
             Michael Parzen and   
             Souparno Ghosh and   
             Stuart Lipsitz and   
            Debajyoti Sinha and   
     Garrett M. Fitzmaurice and   
            Bani K. Mallick and   
              Joseph G. Ibrahim   A generalized linear mixed model for
                                  longitudinal binary data with a marginal
                                  logit link function  . . . . . . . . . . 449--467
                Sijian Wang and   
                    Bin Nan and   
             Saharon Rosset and   
                         Ji Zhu   Random lasso . . . . . . . . . . . . . . 468--485
      Karim Anaya-Izquierdo and   
            Frank Critchley and   
                    Karen Vines   Orthogonal simple component analysis: a
                                  new, exploratory approach  . . . . . . . 486--522
                David Bolin and   
                  Finn Lindgren   Spatial models generated by nested
                                  stochastic partial differential
                                  equations, with an application to global
                                  ozone mapping  . . . . . . . . . . . . . 523--550
              Yangxin Huang and   
                   Hulin Wu and   
       Jeanne Holden-Wiltse and   
               Edward P. Acosta   A dynamic Bayesian nonlinear
                                  mixed-effects model of HIV response
                                  incorporating medication adherence, drug
                                  resistance and covariates  . . . . . . . 551--577
               Sungkyu Jung and   
                Mark Foskey and   
                   J. S. Marron   Principal arc analysis on direct product
                                  manifolds  . . . . . . . . . . . . . . . 578--603
    Bhojnarine R. Rambharat and   
           Anthony E. Brockwell   Sequential Monte Carlo pricing of
                                  American-style options under stochastic
                                  volatility models  . . . . . . . . . . . 604

Annals of Applied Statistics
Volume 5, Number 2A, June, 2011

           Susan M. Paddock and   
            Sarah B. Hunter and   
       Katherine E. Watkins and   
            Daniel F. McCaffrey   Analysis of rolling group therapy data
                                  using conditionally autoregressive
                                  priors . . . . . . . . . . . . . . . . . 605--627
            Daniel Percival and   
             Kathryn Roeder and   
             Roni Rosenfeld and   
                Larry Wasserman   Structured, sparse regression with
                                  application to HIV drug resistance . . . 628--644
             David Siegmund and   
             Benjamin Yakir and   
                 Nancy R. Zhang   Detecting simultaneous variant intervals
                                  in aligned sequences . . . . . . . . . . 645--668
                    Yazhen Wang   Quantum Monte Carlo simulation . . . . . 669--683
                 Haiyong Xu and   
       Frederic Paik Schoenberg   Point process modeling of wildfire
                                  hazard in Los Angeles County, California 684--704
            Valeria D'Amato and   
          Gabriella Piscopo and   
               Maria Russolillo   The mortality of the Italian population:
                                  Smoothing techniques on the Lee--Carter
                                  model  . . . . . . . . . . . . . . . . . 705--724
                 Ruiyan Luo and   
                    Hongyu Zhao   Bayesian hierarchical modeling for
                                  signaling pathway inference from single
                                  cell interventional data . . . . . . . . 725--745
                     Xu Han and   
             Dylan S. Small and   
             Dean P. Foster and   
                   Vishal Patel   The effect of winning an Oscar Award on
                                  survival: Correcting for healthy
                                  performer survivor bias with a rank
                                  preserving structural accelerated
                                  failure time model . . . . . . . . . . . 746--772
        Daniel F. McCaffrey and   
                 J. R. Lockwood   Missing data in value-added modeling of
                                  teacher effects  . . . . . . . . . . . . 773--797
              Tze Leung Lai and   
               Haipeng Xing and   
                     Zehao Chen   Mean--variance portfolio optimization
                                  when means and covariances are unknown   798--823
              Jae Kwang Kim and   
            Wayne A. Fuller and   
                William R. Bell   Variance estimation for nearest neighbor
                                  imputation for US Census long form data  824--842
          Anton H. Westveld and   
                  Peter D. Hoff   A mixed effects model for longitudinal
                                  relational and network data, with
                                  applications to international trade and
                                  conflict . . . . . . . . . . . . . . . . 843--872
                 Doug Speed and   
            Simon Tavaré   Sparse Partitioning: Nonlinear
                                  regression with binary or tertiary
                                  predictors, with application to
                                  association studies  . . . . . . . . . . 873--893
          Jeffrey S. Morris and   
Veerabhadran Baladandayuthapani and   
         Richard C. Herrick and   
               Pietro Sanna and   
                Howard Gutstein   Automated analysis of quantitative image
                                  data using isomorphic functional mixed
                                  models, with application to proteomics
                                  data . . . . . . . . . . . . . . . . . . 894--923
                  Ying Yuan and   
                   Guosheng Yin   Bayesian phase I/II adaptively
                                  randomized oncology trials with combined
                                  drugs  . . . . . . . . . . . . . . . . . 924--942
                Amit Zeisel and   
                     Or Zuk and   
                   Eytan Domany   FDR control with adaptive procedures and
                                  FDR monotonicity . . . . . . . . . . . . 943--968
               Adrian Dobra and   
                  Alex Lenkoski   Copula Gaussian graphical models and
                                  their application to modeling functional
                                  disability data  . . . . . . . . . . . . 969--993
                     Jia Li and   
                George C. Tseng   An adaptively weighted statistic for
                                  detecting differential gene expression
                                  when combining multiple transcriptomic
                                  studies  . . . . . . . . . . . . . . . . 994--1019
               Emily B. Fox and   
           Erik B. Sudderth and   
          Michael I. Jordan and   
                Alan S. Willsky   A sticky HDP-HMM with application to
                                  speaker diarization  . . . . . . . . . . 1020--1056
           Michael Finegold and   
                  Mathias Drton   Robust graphical modeling of gene
                                  networks using classical and alternative
                                  $t$-distributions  . . . . . . . . . . . 1057--1080
           Brent A. Johnson and   
                        Qi Long   Survival ensembles by the sum of
                                  pairwise differences with application to
                                  lung cancer microarray studies . . . . . 1081--1101
                Mark Fiecas and   
                 Hernando Ombao   The generalized shrinkage estimator for
                                  the analysis of functional connectivity
                                  of brain signals . . . . . . . . . . . . 1102--1125

Annals of Applied Statistics
Volume 5, Number 2B, June, 2011

                  Karen Kafadar   Special section on statistics in
                                  neuroscience . . . . . . . . . . . . . . 1127--1131
                Xiaoyan Shi and   
          Joseph G. Ibrahim and   
          Jeffrey Lieberman and   
              Martin Styner and   
                   Yimei Li and   
                     Hongtu Zhu   Two-stage empirical likelihood for
                                  longitudinal neuroimaging data . . . . . 1132--1158
              Vincent Q. Vu and   
          Pradeep Ravikumar and   
           Thomas Naselaris and   
            Kendrick N. Kay and   
            Jack L. Gallant and   
                         Bin Yu   Encoding and decoding V1 fMRI responses
                                  to natural images with sparse
                                  nonparametric models . . . . . . . . . . 1159--1182
       Sourabh Bhattacharya and   
                  Ranjan Maitra   A nonstationary nonparametric Bayesian
                                  approach to dynamically modeling
                                  effective connectivity in functional
                                  magnetic resonance imaging experiments   1183--1206
        Christopher J. Long and   
          Patrick L. Purdon and   
          Simona Temereanca and   
              Neil U. Desai and   
Matti S. Hämäläinen and   
                 Emery N. Brown   State-space solutions to the dynamic
                                  magnetoencephalography inverse problem
                                  using high performance computing . . . . 1207--1228
           Yuriy Mishchenko and   
       Joshua T. Vogelstein and   
                  Liam Paninski   A Bayesian approach for inferring
                                  neuronal connectivity from calcium
                                  fluorescent imaging data . . . . . . . . 1229--1261
             Robert E. Kass and   
              Ryan C. Kelly and   
                   Wei-Liem Loh   Assessment of synchrony in multiple
                                  neural spike trains using loglinear
                                  point process models . . . . . . . . . . 1262--1292
            Sofia C. Olhede and   
               Brandon Whitcher   Nonparametric tests of structure for
                                  high angular resolution diffusion
                                  imaging in $Q$-space . . . . . . . . . . 1293--1327
Jenný Brynjarsdóttir and   
               L. Mark Berliner   Bayesian hierarchical modeling for
                                  temperature reconstruction from
                                  geothermal data  . . . . . . . . . . . . 1328--1359
             Lorenzo Trippa and   
            Giovanni Parmigiani   False discovery rates in somatic
                                  mutation studies of cancer . . . . . . . 1360--1378
          David S. Matteson and   
           Mathew W. McLean and   
            Dawn B. Woodard and   
             Shane G. Henderson   Forecasting emergency medical service
                                  call arrival rates . . . . . . . . . . . 1379--1406
          Nozer D. Singpurwalla   Network routing in a dynamic environment 1407--1424
           Andrew C. Thomas and   
            Stephen E. Fienberg   Discussion of ``Network routing in a
                                  dynamic environment''  . . . . . . . . . 1425--1427
              Vishesh Karwa and   
  Aleksandra B. Slavkovi\'c and   
                Eric T. Donnell   Causal inference in transportation
                                  safety studies: Comparison of potential
                                  outcomes and causal diagrams . . . . . . 1428--1455
              Saijuan Zhang and   
         Raymond J. Carroll and   
           Douglas Midthune and   
       Patricia M. Guenther and   
       Susan M. Krebs-Smith and   
              Victor Kipnis and   
              Kevin W. Dodd and   
          Dennis W. Buckman and   
             Janet A. Tooze and   
              Laurence Freedman   A new multivariate measurement error
                                  model with zero-inflated dietary data,
                                  and its application to dietary
                                  assessment . . . . . . . . . . . . . . . 1456--1487
            Leanna L. House and   
           Merlise A. Clyde and   
              Robert L. Wolpert   Bayesian nonparametric models for peak
                                  identification in MALDI-TOF mass
                                  spectroscopy . . . . . . . . . . . . . . 1488--1511
            Irene Rocchetti and   
                 John Bunge and   
           Dankmar Böhning   Population size estimation based upon
                                  ratios of recapture probabilities  . . . 1512--1533
              David Knowles and   
              Zoubin Ghahramani   Nonparametric Bayesian sparse factor
                                  models with application to gene
                                  expression modeling  . . . . . . . . . . 1534--1552
            Andrea Tancredi and   
                  Brunero Liseo   A hierarchical Bayesian approach to
                                  record linkage and population size
                                  problems . . . . . . . . . . . . . . . . 1553--1585
           Rensheng R. Zhou and   
            Nicoleta Serban and   
                  Nagi Gebraeel   Degradation modeling applied to residual
                                  lifetime prediction using functional
                                  data analysis  . . . . . . . . . . . . . 1586--1610
        Björn Bornkamp and   
                Frank Bretz and   
               Holger Dette and   
           José Pinheiro   Response-adaptive dose-finding under
                                  model uncertainty  . . . . . . . . . . . 1611--1631
                   Eric Gautier   Hierarchical Bayesian estimation of
                                  inequality measures with nonrectangular
                                  censored survey data with an application
                                  to wealth distribution of French
                                  households . . . . . . . . . . . . . . . 1632--1656
                    Jo Bovy and   
              David W. Hogg and   
                  Sam T. Roweis   Extreme deconvolution: Inferring
                                  complete distribution functions from
                                  noisy, heterogeneous and incomplete
                                  observations . . . . . . . . . . . . . . 1657--1677
                Qingzhao Yu and   
       Steven N. MacEachern and   
                 Mario Peruggia   Bayesian Synthesis: Combining subjective
                                  analyses, with an application to ozone
                                  data . . . . . . . . . . . . . . . . . . 1678--1698

Annals of Applied Statistics
Volume 5, Number 3, September, 2011

          Juliette Blanchet and   
             Anthony C. Davison   Spatial modeling of extreme snow depth   1699--1725
          Danny Pfeffermann and   
              Victoria Landsman   Are private schools better than public
                                  schools? Appraisal for Ireland by
                                  methods for observational studies  . . . 1726--1751
                  Qunhua Li and   
             James B. Brown and   
               Haiyan Huang and   
                Peter J. Bickel   Measuring reproducibility of
                                  high-throughput experiments  . . . . . . 1752--1779
               Yongtao Guan and   
               Matthew Stephens   Bayesian variable selection regression
                                  for genome-wide association studies and
                                  other large-scale problems . . . . . . . 1780--1815
             Gail E. Potter and   
           Mark S. Handcock and   
        Ira M. Longini, Jr. and   
          M. Elizabeth Halloran   Estimating within-household contact
                                  networks from egocentric data  . . . . . 1816--1838
             Deepak Agarwal and   
                Liang Zhang and   
                 Rahul Mazumder   Modeling item--item similarities for
                                  personalized recommendations on Yahoo!
                                  front page . . . . . . . . . . . . . . . 1839--1875
           Corwin M. Zigler and   
                Thomas R. Belin   The potential for bias in principal
                                  causal effect estimation when treatment
                                  received depends on a key covariate  . . 1876--1892
           Yuriy Mishchenko and   
                  Liam Paninski   Efficient methods for sampling spike
                                  trains in networks of coupled neurons    1893--1919
                 O. Stenzel and   
                 V. Schmidt and   
                H. Hassfeld and   
               R. Thiedmann and   
            L. J. A. Koster and   
           S. D. Oosterhout and   
            S. S. van Bavel and   
                M. M. Wienk and   
                    J. Loos and   
               R. A. J. Janssen   Spatial modeling of the 3D morphology of
                                  hybrid polymer-ZnO solar cells, based on
                                  electron tomography data . . . . . . . . 1920--1947
    Sabyasachi Mukhopadhyay and   
       Sourabh Bhattacharya and   
                  Kajal Dihidar   On Bayesian ``central clustering'':
                                  Application to landscape classification
                                  of Western Ghats . . . . . . . . . . . . 1948--1977
        Francesco C. Stingo and   
               Yian A. Chen and   
          Mahlet G. Tadesse and   
                Marina Vannucci   Incorporating biological information
                                  into linear models: a Bayesian approach
                                  to the selection of pathways and genes   1978--2002
                    Qi Long and   
             Matthias Chung and   
           Carlos S. Moreno and   
               Brent A. Johnson   Risk prediction for prostate cancer
                                  recurrence through regularized
                                  estimation with simultaneous adjustment
                                  for nonlinear clinical effects . . . . . 2003--2023
                Nicoleta Serban   A space--time varying coefficient model:
                                  The equity of service accessibility  . . 2024--2051
                   Yu Zhang and   
                 Jing Zhang and   
                     Jun S. Liu   Block-based Bayesian epistasis
                                  association mapping with application to
                                  WTCCC type 1 diabetes data . . . . . . . 2052--2077
              Debashis Paul and   
                   Jie Peng and   
                  Prabir Burman   Semiparametric modeling of autonomous
                                  nonlinear dynamical systems with
                                  application to plant growth  . . . . . . 2078--2108
                  Zeny Feng and   
         William W. L. Wong and   
                    Xin Gao and   
                Flavio Schenkel   Generalized genetic association study
                                  with samples of related individuals  . . 2109--2130
          Charlotte Soneson and   
                  Magnus Fontes   A method for visual identification of
                                  small sample subgroups and potential
                                  biomarkers . . . . . . . . . . . . . . . 2131--2149
 Miguel A. Martinez-Beneito and   
Gonzalo García-Donato and   
          Diego Salmerón   A Bayesian Joinpoint regression model
                                  with an unknown number of break-points   2150--2168
             Daniel Samarov and   
               J. S. Marron and   
                 Yufeng Liu and   
         Christopher Grulke and   
              Alexander Tropsha   Local kernel canonical correlation
                                  analysis with application to virtual
                                  drug screening . . . . . . . . . . . . . 2169--2196
                 Georg M. Goerg   Lambert $W$ random variables --- a new
                                  family of generalized skewed
                                  distributions with applications to risk
                                  estimation . . . . . . . . . . . . . . . 2197--2230
            Thomas Kitching and   
            Sreekumar Balan and   
             Gary Bernstein and   
            Matthias Bethge and   
               Sarah Bridle and   
           Frederic Courbin and   
               Marc Gentile and   
               Alan Heavens and   
             Michael Hirsch and   
            Reshad Hosseini and   
            Alina Kiessling and   
                 Adam Amara and   
              Donnacha Kirk and   
             Konrad Kuijken and   
          Rachel Mandelbaum and   
           Baback Moghaddam and   
         Guldariya Nurbaeva and   
 Stephane Paulin-Henriksson and   
               Anais Rassat and   
               Jason Rhodes and   
    Bernhard Schölkopf and   
          John Shawe-Taylor and   
               Mandeep Gill and   
            Marina Shmakova and   
                Andy Taylor and   
             Malin Velander and   
       Ludovic van Waerbeke and   
            Dugan Witherick and   
              David Wittman and   
           Stefan Harmeling and   
          Catherine Heymans and   
             Richard Massey and   
               Barnaby Rowe and   
             Tim Schrabback and   
                     Lisa Voigt   Gravitational Lensing Accuracy Testing
                                  2010 (GREAT10) Challenge Handbook  . . . 2231--2263

Annals of Applied Statistics
Volume 5, Number 4, December, 2011

                  Karen Kafadar   Special section on modern multivariate
                                  analysis . . . . . . . . . . . . . . . . 2265
            Omar De la Cruz and   
                   Susan Holmes   The duality diagram in data analysis:
                                  Examples of modern applications  . . . . 2266--2277
       Stéphane Dray and   
                Thibaut Jombart   Revisiting Guerry's data: Introducing
                                  spatial constraints in multivariate
                                  analysis . . . . . . . . . . . . . . . . 2278--2299
                Jean Thioulouse   Simultaneous analysis of a sequence of
                                  paired ecological tables: a comparison
                                  of several methods . . . . . . . . . . . 2300--2325
               Elizabeth Purdom   Analysis of a data matrix and a graph:
                                  Metagenomic data and the phylogenetic
                                  tree . . . . . . . . . . . . . . . . . . 2326--2358
              Stefano Conti and   
           Anne M. Presanis and   
         Maaike G. van Veen and   
              Maria Xiridou and   
         Martin C. Donoghoe and   
 Annemarie Rinder Stengaard and   
             Daniela De Angelis   Modeling of the HIV infection epidemic
                                  in the Netherlands: a multi-parameter
                                  evidence synthesis approach  . . . . . . 2359--2384
      Luis Gutiérrez and   
           Fernando A. Quintana   Multivariate Bayesian semiparametric
                                  models for authentication of food and
                                  beverages  . . . . . . . . . . . . . . . 2385--2402
                 Jacob Bien and   
              Robert Tibshirani   Prototype selection for interpretable
                                  classification . . . . . . . . . . . . . 2403--2424
             Brian J. Reich and   
                 Jo Eidsvik and   
           Michele Guindani and   
                Amy J. Nail and   
           Alexandra M. Schmidt   A class of covariate-dependent
                                  spatiotemporal covariance functions for
                                  the analysis of daily ozone
                                  concentration  . . . . . . . . . . . . . 2425--2447
          Adam R. Brentnall and   
           Stephen W. Duffy and   
          Martin J. Crowder and   
       Maureen G. C. Gillan and   
            Susan M. Astley and   
          Matthew G. Wallis and   
             Jonathan James and   
      Caroline R. M. Boggis and   
               Fiona J. Gilbert   A method for exploratory
                                  repeated-measures analysis applied to a
                                  breast-cancer screening study  . . . . . 2448--2469
            Cari G. Kaufman and   
              Derek Bingham and   
               Salman Habib and   
            Katrin Heitmann and   
              Joshua A. Frieman   Efficient emulators of computer
                                  experiments using compactly supported
                                  correlation functions, with an
                                  application to cosmology . . . . . . . . 2470--2492
              Daniela M. Witten   Classification and clustering of
                                  sequencing data using a Poisson model    2493--2518
                Huiyan Sang and   
               Mikyoung Jun and   
               Jianhua Z. Huang   Covariance approximation for large
                                  multivariate spatial data sets with an
                                  application to multiple climate model
                                  errors . . . . . . . . . . . . . . . . . 2519--2548
       Robert Alan Clements and   
   Frederic Paik Schoenberg and   
            Danijel Schorlemmer   Residual analysis methods for
                                  space--time point processes with
                                  applications to earthquake forecast
                                  models in California . . . . . . . . . . 2549--2571
        Victor M. Panaretos and   
                    Kjell Konis   Sparse approximations of protein
                                  structure from noisy random projections  2572--2602
              Irina Czogiel and   
              Ian L. Dryden and   
        Christopher J. Brignell   Bayesian matching of unlabeled marked
                                  point sets using random fields, with an
                                  application to molecular alignment . . . 2603--2629
                Jianxin Yin and   
                     Hongzhe Li   A sparse conditional Gaussian graphical
                                  model for analysis of genetical genomics
                                  data . . . . . . . . . . . . . . . . . . 2630--2650
     Enrique F. Schisterman and   
              Albert Vexler and   
                   Aijun Ye and   
                Neil J. Perkins   A combined efficient design for
                                  biomarker data subject to a limit of
                                  detection due to measuring instrument
                                  sensitivity  . . . . . . . . . . . . . . 2651--2667
                   Hui Shen and   
           William J. Welch and   
    Jacqueline M. Hughes-Oliver   Efficient, adaptive cross-validation for
                                  tuning and comparing models, with
                                  application to drug discovery  . . . . . 2668--2687


Annals of Applied Statistics
Volume 6, Number 1, March, 2012

             Gail E. Potter and   
           Mark S. Handcock and   
             Ira M. Longini and   
          M. Elizabeth Halloran   Estimating within-school contact
                                  networks to understand influenza
                                  transmission . . . . . . . . . . . . . . 1--26
               Zhiwei Zhang and   
             Paul S. Albert and   
            Bruce Simons-Morton   Marginal analysis of longitudinal count
                                  data in long sequences: Methods and
                                  applications to a driving study  . . . . 27--54
           Edward I. George and   
                     Sam K. Hui   Optimal pricing using online auction
                                  experiments: A Pólya tree approach  . . . 55--82
              Paul R. Rosenbaum   An exact adaptive test with superior
                                  design sensitivity in an observational
                                  study of treatments for ovarian cancer   83--105
          Michael D. Porter and   
                   Gentry White   Self-exciting hurdle models for
                                  terrorist activity . . . . . . . . . . . 106--124
Stéphanie Allassonni\`ere and   
                 Laurent Younes   A stochastic algorithm for probabilistic
                                  independent component analysis . . . . . 125--160
         Nicholas G. Polson and   
                 James G. Scott   Good, great, or lucky? Screening for
                                  firms with sustained superior
                                  performance using heavy-tailed priors    161--185
             Antonio Galves and   
           Charlotte Galves and   
Jesús E. García and   
            Nancy L. Garcia and   
             Florencia Leonardi   Context tree selection and linguistic
                                  rhythm retrieval from written texts  . . 186--209
             Lucio Barabesi and   
            Sara Franceschi and   
             Marzia Marcheselli   Properties of design-based estimation
                                  under stratified spatial sampling with
                                  application to canopy coverage
                                  estimation . . . . . . . . . . . . . . . 210--228
                   Hao Wang and   
               Jerome P. Reiter   Multiple imputation for sharing precise
                                  geographies in public use data . . . . . 229--252
                 Ronny Luss and   
             Saharon Rosset and   
                    Moni Shahar   Efficient regularized isotonic
                                  regression with application to
                                  gene--gene interaction search  . . . . . 253--283
          Hedibert F. Lopes and   
       Alexandra M. Schmidt and   
             Esther Salazar and   
       Mariana Gómez and   
                  Marcel Achkar   Measuring the vulnerability of the
                                  Uruguayan population to vector-borne
                                  diseases via spatially hierarchical
                                  factor models  . . . . . . . . . . . . . 284--303
             Andrea Riebler and   
              Leonhard Held and   
               Håvard Rue   Estimation and extrapolation of time
                                  trends in registry data --- Borrowing
                                  strength from related populations  . . . 304--333
                   Peng Wei and   
                        Wei Pan   Bayesian joint modeling of multiple gene
                                  networks and diverse genomic data to
                                  identify target genes of a transcription
                                  factor . . . . . . . . . . . . . . . . . 334--355
           Chung-Hsing Chen and   
                 Wen-Chi Su and   
               Chih-Yu Chen and   
            Jing-Ying Huang and   
               Fang-Yu Tsai and   
             Wen-Chang Wang and   
             Chao A. Hsiung and   
             King-Song Jeng and   
                   I-Shou Chang   A Bayesian measurement error model for
                                  two-channel cell-based RNAi data with
                                  replicates . . . . . . . . . . . . . . . 356--382
         Joseph W. Richards and   
                 Ann B. Lee and   
            Chad M. Schafer and   
               Peter E. Freeman   Prototype selection for parameter
                                  estimation in complex models . . . . . . 383--408
                   Ying Wei and   
               Zhibiao Zhao and   
               Dennis K. J. Lin   Profile control charts based on
                                  nonparametric $ L - 1 $ regression
                                  methods  . . . . . . . . . . . . . . . . 409--427

Annals of Applied Statistics
Volume 6, Number 2, June, 2012

                  Karen Kafadar   Special section: Statistical methods for
                                  next-generation gene sequencing data . . 429--431
                    Zhen Li and   
          Vikneswaran Gopal and   
                  Xiaobo Li and   
              John M. Davis and   
                 George Casella   Simultaneous SNP identification in
                                  association studies with missing data    432--456
                 Baiyu Zhou and   
            Alice S. Whittemore   Improving sequence-based genotype calls
                                  with linkage disequilibrium and pedigree
                                  information  . . . . . . . . . . . . . . 457--475
             Jeremy J. Shen and   
                 Nancy R. Zhang   Change-point model on nonhomogeneous
                                  Poisson processes with application in
                                  copy number profiling by next-generation
                                  DNA sequencing . . . . . . . . . . . . . 476--496
              Xi Kathy Zhou and   
                    Fei Liu and   
           Andrew J. Dannenberg   A Bayesian model averaging approach for
                                  observational gene expression studies    497--520
             Loki Natarajan and   
                   Minya Pu and   
                   Karen Messer   Statistical tests for the intersection
                                  of independent lists of genes:
                                  Sensitivity, FDR, and type I error
                                  control  . . . . . . . . . . . . . . . . 521--541
          Donatello Telesca and   
          Peter Müller and   
        Giovanni Parmigiani and   
              Ralph S. Freedman   Modeling dependent gene expression . . . 542--560
              Laurent Jacob and   
             Pierre Neuvial and   
                Sandrine Dudoit   More power via graph-structured tests
                                  for differential expression of gene
                                  networks . . . . . . . . . . . . . . . . 561--600
                  Chong Liu and   
                Surajit Ray and   
               Giles Hooker and   
                    Mark Friedl   Functional factor analysis for periodic
                                  remote sensing data  . . . . . . . . . . 601--624
           Brian M. Hartman and   
            Bani K. Mallick and   
             Debabrata Talukdar   Investigating international new product
                                  diffusion speed: a semiparametric
                                  approach . . . . . . . . . . . . . . . . 625--651
         Tyler H. McCormick and   
              Cynthia Rudin and   
                  David Madigan   Bayesian hierarchical rule modeling for
                                  predicting medical conditions  . . . . . 652--668
         Oleksandr Gromenko and   
             Piotr Kokoszka and   
                    Lie Zhu and   
                      Jan Sojka   Estimation and testing for spatially
                                  indexed curves with application to
                                  ionospheric and magnetic field trends    669--696
                Yu Ryan Yue and   
        Martin A. Lindquist and   
                    Ji Meng Loh   Meta-analysis of functional neuroimaging
                                  data using Bayesian nonparametric binary
                                  regression . . . . . . . . . . . . . . . 697--718
                    Xi Chen and   
                 Qihang Lin and   
                Seyoung Kim and   
         Jaime G. Carbonell and   
                   Eric P. Xing   Smoothing proximal gradient method for
                                  general structured sparse regression . . 719--752
              Guangyu Zhang and   
                      Ying Yuan   Bayesian modeling longitudinal dyadic
                                  data with nonignorable dropout, with
                                  application to a breast cancer study . . 753--771
               Polly Phipps and   
                   Daniell Toth   Analyzing establishment nonresponse
                                  using an interpretable regression tree
                                  model with linked administrative data    772--794
             Julien Chiquet and   
            Yves Grandvalet and   
            Camille Charbonnier   Sparsity with sign-coherent groups of
                                  variables via the cooperative-Lasso  . . 795--830

Annals of Applied Statistics
Volume 6, Number 3, September, 2012

Peter G. M. van der Heijden and   
              Joe Whittaker and   
             Maarten Cruyff and   
                Bart Bakker and   
              Rik van der Vliet   People born in the Middle East but
                                  residing in the Netherlands: Invariant
                                  population size estimates and the role
                                  of active and passive covariates . . . . 831--852
            Kanti V. Mardia and   
              Emma M. Petty and   
              Charles C. Taylor   Matching markers and unlabeled
                                  configurations in protein gels . . . . . 853--869
               Spencer Hays and   
               Haipeng Shen and   
               Jianhua Z. Huang   Functional dynamic factor models with
                                  application to yield curve forecasting   870--894
                Art B. Owen and   
                    Dean Eckles   Bootstrapping data arrays of arbitrary
                                  order  . . . . . . . . . . . . . . . . . 895--927
              Juli Atherton and   
               Nathan Boley and   
                  Ben Brown and   
                Nobuo Ogawa and   
         Stuart M. Davidson and   
           Michael B. Eisen and   
             Mark D. Biggin and   
                   Peter Bickel   A model for sequential evolution of
                                  ligands by exponential enrichment
                                  (SELEX) data . . . . . . . . . . . . . . 928--949
                    Chao Du and   
                      S. C. Kou   Correlation analysis of enzymatic
                                  reaction of a single protein molecule    950--976
            Antoine Chambaz and   
               Christophe Denis   Classification in postural style . . . . 977--993
             Bryony J. Hill and   
         Wilfrid S. Kendall and   
              Elke Thönnes   Fibre-generated point processes and
                                  fields of orientations . . . . . . . . . 994--1020
             Tian Siva Tian and   
           Jianhua Z. Huang and   
               Haipeng Shen and   
                      Zhimin Li   A two-way regularization method for MEG
                                  source reconstruction  . . . . . . . . . 1021--1046
         Omkar Muralidharan and   
          Georges Natsoulis and   
                  John Bell and   
                  Hanlee Ji and   
                 Nancy R. Zhang   Detecting mutations in mixed sample
                                  sequencing data using empirical Bayes    1047--1067
           Natallia Katenka and   
               Eric D. Kolaczyk   Inference and characterization of
                                  multi-attribute networks with
                                  application to computational biology . . 1068--1094
                Seyoung Kim and   
                   Eric P. Xing   Tree-guided group lasso for
                                  multi-response regression with
                                  structured sparsity, with an application
                                  to eQTL mapping  . . . . . . . . . . . . 1095--1117
             Steven P. Lund and   
                  Dan Nettleton   The importance of distinct modeling
                                  strategies for gene and gene-specific
                                  treatment effects in hierarchical models
                                  for microarray data  . . . . . . . . . . 1118--1133
                  Shaoyu Li and   
                     Yuehua Cui   Gene-centric gene--gene interaction: a
                                  model-based kernel machine method  . . . 1134--1161
                  Yong Wang and   
               Ilze Ziedins and   
                Mark Holmes and   
                 Neil Challands   Tree models for difference and change
                                  detection in a complex environment . . . 1162--1184
       Anastasia Voulgaraki and   
             Benjamin Kedem and   
              Barry I. Graubard   Semiparametric regression in testicular
                                  germ cell data . . . . . . . . . . . . . 1185--1208
            Chris. J. Oates and   
                 Sach Mukherjee   Network inference and biological
                                  dynamics . . . . . . . . . . . . . . . . 1209--1235
                    Hai Liu and   
                Shuangge Ma and   
            Richard Kronmal and   
                  Kung-Sik Chan   Semiparametric zero-inflated modeling in
                                  multi-ethnic study of atherosclerosis
                                  (MESA) . . . . . . . . . . . . . . . . . 1236--1255
                      Ying Hung   Order selection in nonlinear time series
                                  models with application to the study of
                                  cell memory  . . . . . . . . . . . . . . 1256--1279
                Donghui Yan and   
                   Pei Wang and   
             Michael Linden and   
           Beatrice Knudsen and   
               Timothy Randolph   Statistical methods for tissue array
                                  images --- algorithmic scoring and
                                  co-training  . . . . . . . . . . . . . . 1280--1305
                 Yue S. Niu and   
                   Heping Zhang   The screening and ranking algorithm to
                                  detect DNA copy number variations  . . . 1306--1326
        Matthias Kormaksson and   
             James G. Booth and   
          Maria E. Figueroa and   
                    Ari Melnick   Integrative Model-based clustering of
                                  microarray methylation and expression
                                  data . . . . . . . . . . . . . . . . . . 1327--1347

Annals of Applied Statistics
Volume 6, Number 4, December, 2012

               Tilmann Gneiting   Section on the Special Year for
                                  Mathematics of Planet Earth (MPE 2013)   1349--1351
         Andrew W. Baggaley and   
            Richard J. Boys and   
           Andrew Golightly and   
           Graeme R. Sarson and   
                 Anvar Shukurov   Inference for population dynamics in the
                                  Neolithic period . . . . . . . . . . . . 1352--1376
      Panu Erästö and   
       Lasse Holmström and   
               Atte Korhola and   
             Jan Weckström   Finding a consensus on credible features
                                  among several paleoclimate
                                  reconstructions  . . . . . . . . . . . . 1377--1405
              Daniel Cooley and   
           Richard A. Davis and   
                Philippe Naveau   Approximating the conditional density
                                  given large observed values via a
                                  multivariate extremes framework, with
                                  application to environmental data  . . . 1406--1429
             Brian J. Reich and   
              Benjamin A. Shaby   A hierarchical max-stable spatial model
                                  for extreme precipitation  . . . . . . . 1430--1451
              Fabio Sigrist and   
        Hans R. Künsch and   
               Werner A. Stahel   A dynamic nonstationary spatio-temporal
                                  model for short term prediction of
                                  precipitation  . . . . . . . . . . . . . 1452--1477
      Giovanna Jona-Lasinio and   
               Alan Gelfand and   
            Mattia Jona-Lasinio   Spatial analysis of wave direction data
                                  using wrapped Gaussian processes . . . . 1478--1498
           Janine B. Illian and   
   Sigrunn H. Sòrbye and   
               Håvard Rue   A toolbox for fitting complex spatial
                                  point process models using integrated
                                  nested Laplace approximation (INLA)  . . 1499--1530
               Trond Reitan and   
              Tore Schweder and   
            Jorijntje Henderiks   Phenotypic evolution studied by layered
                                  stochastic differential equations  . . . 1531--1551
               S. N. Lahiri and   
              C. Spiegelman and   
                  J. Appiah and   
                      L. Rilett   Gap bootstrap methods for massive data
                                  sets with an application to
                                  transportation engineering . . . . . . . 1552--1587
                 Jeng-Min Chiou   Dynamical functional prediction and
                                  classification, with application to
                                  traffic flow prediction  . . . . . . . . 1588--1614
             Gelila Tilahun and   
         Andrey Feuerverger and   
                Michael Gervers   Dating medieval English charters . . . . 1615--1640
 Candemir Çi\ug\csar and   
              Jerald F. Lawless   Assessing transient carryover effects in
                                  recurrent event processes, with
                                  application to chronic health conditions 1641--1663
                Yunting Sun and   
             Nancy R. Zhang and   
                    Art B. Owen   Multiple hypothesis testing adjusted for
                                  latent variables, with an application to
                                  the AGEMAP gene expression data  . . . . 1664--1688
                   Hao Wang and   
              Saul Shiffman and   
         Sandra D. Griffith and   
              Daniel F. Heitjan   Truth and memory: Linking instantaneous
                                  and retrospective self-reported
                                  cigarette consumption  . . . . . . . . . 1689--1706
                Trina Patel and   
          Donatello Telesca and   
                Saji George and   
            André E. Nel   Toxicity profiling of engineered
                                  nanomaterials via multivariate
                                  dose-response surface modeling . . . . . 1707--1729
            Vural Aksakalli and   
                   Elvan Ceyhan   Optimal obstacle placement with
                                  disambiguations  . . . . . . . . . . . . 1730--1774
                  Qunhua Li and   
               Jimmy K. Eng and   
               Matthew Stephens   A likelihood-based scoring method for
                                  peptide identification using mass
                                  spectrometry . . . . . . . . . . . . . . 1775--1794
         Tyler H. McCormick and   
                     Tian Zheng   Latent demographic profile estimation in
                                  hard-to-reach groups . . . . . . . . . . 1795--1813
             Juned Siddique and   
                 Ofer Harel and   
            Catherine M. Crespi   Addressing missing data mechanism
                                  uncertainty using multiple-model
                                  multiple imputation: Application to a
                                  longitudinal clinical trial  . . . . . . 1814--1837
                    Shan Ba and   
               V. Roshan Joseph   Composite Gaussian process models for
                                  emulating expensive functions  . . . . . 1838--1860
                    Hai Liu and   
                      Wanzhu Tu   A semiparametric regression model for
                                  paired longitudinal outcomes with
                                  application in childhood blood pressure
                                  development  . . . . . . . . . . . . . . 1861--1882
               M. Filippone and   
             A. F. Marquand and   
             C. R. V. Blain and   
          S. C. R. Williams and   
   J. Mourão-Miranda and   
                    M. Girolami   Probabilistic prediction of neurological
                                  disorders with a statistical assessment
                                  of neuroimaging data modalities  . . . . 1883--1905
           John A. D. Aston and   
                  Claudia Kirch   Evaluating stationarity via change-point
                                  alternatives with applications to fMRI
                                  data . . . . . . . . . . . . . . . . . . 1906--1948
            Guido Masarotto and   
                Cristiano Varin   The ranking lasso and its application to
                                  sport tournaments  . . . . . . . . . . . 1949--1970
                  Bradley Efron   Bayesian inference and the parametric
                                  bootstrap  . . . . . . . . . . . . . . . 1971--1997


Annals of Applied Statistics
Volume 7, Number 1, March, 2013

               Micha Mandel and   
             Manor Askenazi and   
                   Yi Zhang and   
                Jarrod A. Marto   Variance function estimation in
                                  quantitative mass spectrometry with
                                  application to iTRAQ labeling  . . . . . 1--24
 José R. Zubizarreta and   
             Dylan S. Small and   
             Neera K. Goyal and   
                Scott Lorch and   
              Paul R. Rosenbaum   Stronger instruments via integer
                                  programming in an observational study of
                                  late preterm birth outcomes  . . . . . . 25--50
          Robert B. Gramacy and   
                 Matt Taddy and   
                 Stefan M. Wild   Variable selection and sensitivity
                                  analysis using dynamic trees, with an
                                  application to computer code performance
                                  tuning . . . . . . . . . . . . . . . . . 51--80
              Francesco Finazzi   Geostatistical modeling in the presence
                                  of interaction between the measuring
                                  instruments, with an application to the
                                  estimation of spatial market potentials  81--101
                  Ying Yuan and   
                 Hongtu Zhu and   
              Martin Styner and   
            John H. Gilmore and   
                   J. S. Marron   Varying coefficient model for modeling
                                  diffusion tensors along white matter
                                  tracts . . . . . . . . . . . . . . . . . 102--125
              Xiaojing Wang and   
            James O. Berger and   
              Donald S. Burdick   Bayesian analysis of dynamic item
                                  response models in educational testing   126--153
             Harrison Quick and   
           Sudipto Banerjee and   
              Bradley P. Carlin   Modeling temporal gradients in
                                  regionally aggregated California asthma
                                  hospitalization data . . . . . . . . . . 154--176
    Arno\vst Komárek and   
  Lenka Komárková   Clustering for multivariate continuous
                                  and discrete longitudinal data . . . . . 177--200
                     Tao Yu and   
             Chunming Zhang and   
        Andrew L. Alexander and   
            Richard J. Davidson   Local tests for identifying anisotropic
                                  diffusion areas in human brain with DTI  201--225
             Andreas Alfons and   
           Christophe Croux and   
                   Sarah Gelper   Sparse least trimmed squares regression
                                  for analyzing high-dimensional large
                                  data sets  . . . . . . . . . . . . . . . 226--248
              Jingyuan Yang and   
                      Shili Lin   Robust partial likelihood approach for
                                  detecting imprinting and maternal
                                  effects using case-control families  . . 249--268
               Ronglai Shen and   
                Sijian Wang and   
                    Qianxing Mo   Sparse integrative clustering of
                                  multiple omics data sets . . . . . . . . 269--294
                    Winston Lin   Agnostic notes on regression adjustments
                                  to experimental data: Reexamining
                                  Freedman's critique  . . . . . . . . . . 295--318
           Debbie J. Dupuis and   
       Maria-Pia Victoria-Feser   Robust VIF regression with application
                                  to variable selection in large data sets 319--341
                  Minge Xie and   
              Regina Y. Liu and   
             C. V. Damaraju and   
               William H. Olson   Incorporating external information in
                                  analyses of clinical trials with binary
                                  outcomes . . . . . . . . . . . . . . . . 342--368
              Matti Pirinen and   
             Peter Donnelly and   
            Chris C. A. Spencer   Efficient computation with a linear
                                  mixed model on large-scale data sets
                                  with applications to genetic studies . . 369--390
                  Shuang Li and   
                     Li Hsu and   
                   Jie Peng and   
                       Pei Wang   Bootstrap inference for network
                                  construction with an application to a
                                  breast cancer microarray study . . . . . 391--417
                   Jun Chen and   
                     Hongzhe Li   Variable selection for sparse
                                  Dirichlet-multinomial regression with an
                                  application to microbiome data analysis  418--442
                Kosuke Imai and   
                  Marc Ratkovic   Estimating treatment effect
                                  heterogeneity in randomized program
                                  evaluation . . . . . . . . . . . . . . . 443--470
          Armin Schwartzman and   
               Andrew Jaffe and   
             Yulia Gavrilov and   
              Clifford A. Meyer   Multiple testing of local maxima for
                                  detection of peaks in ChIP-Seq data  . . 471--494
                Wei-Yin Loh and   
                      Wei Zheng   Regression trees for longitudinal and
                                  multiresponse data . . . . . . . . . . . 495--522
               Eric F. Lock and   
       Katherine A. Hoadley and   
               J. S. Marron and   
                Andrew B. Nobel   Joint and individual variation explained
                                  (JIVE) for integrated analysis of
                                  multiple data types  . . . . . . . . . . 523--542
                  Jaeil Ahn and   
          Bhramar Mukherjee and   
          Stephen B. Gruber and   
                    Malay Ghosh   Bayesian semiparametric analysis for
                                  two-phase studies of gene-environment
                                  interaction  . . . . . . . . . . . . . . 543--569
           Robert T. Krafty and   
                   Martica Hall   Canonical correlation analysis between
                                  time series and static outcomes, with
                                  application to the spectral analysis of
                                  heart rate variability . . . . . . . . . 570--587
            William Kleiber and   
            Richard W. Katz and   
             Balaji Rajagopalan   Daily minimum and maximum temperature
                                  simulation over complex terrain  . . . . 588--612

Annals of Applied Statistics
Volume 7, Number 2, June, 2013

               Thomas Rusch and   
            Paul Hofmarcher and   
         Reinhold Hatzinger and   
                    Kurt Hornik   Model trees with topic model
                                  preprocessing: An approach for data
                                  journalism illustrated with the
                                  WikiLeaks Afghanistan war logs . . . . . 613--639
           Bledar A. Konomi and   
            Soma S. Dhavala and   
           Jianhua Z. Huang and   
              Subrata Kundu and   
              David Huitink and   
                 Hong Liang and   
                    Yu Ding and   
                Bani K. Mallick   Bayesian object classification of gold
                                  nanoparticles  . . . . . . . . . . . . . 640--668
            Andrew Crossett and   
                 Ann B. Lee and   
             Lambertus Klei and   
              Bernie Devlin and   
                 Kathryn Roeder   Refining genetically inferred
                                  relationships using treelet covariance
                                  smoothing  . . . . . . . . . . . . . . . 669--690
              Ricardo Henao and   
           J. Will Thompson and   
          M. Arthur Moseley and   
       Geoffrey S. Ginsburg and   
             Lawrence Carin and   
                Joseph E. Lucas   Latent protein trees . . . . . . . . . . 691--713
              Julia Mortera and   
               Paola Vicard and   
                Cecilia Vergari   Object-oriented Bayesian networks for a
                                  decision support system for antitrust
                                  enforcement  . . . . . . . . . . . . . . 714--738
                Brian Reich and   
              Daniel Cooley and   
              Kristen Foley and   
           Sergey Napelenok and   
                 Benjamin Shaby   Extreme value analysis for evaluating
                                  ozone control strategies . . . . . . . . 739--762
         Pasquale Valentini and   
             Luigi Ippoliti and   
                Lara Fontanella   Modeling US housing prices by spatial
                                  dynamic structural equation models . . . 763--798
     Vinicius Diniz Mayrink and   
            Joseph Edward Lucas   Sparse latent factor models with
                                  interactions: Analysis of gene
                                  expression data  . . . . . . . . . . . . 799--822
   Gwenaël G. R. Leday and   
       Aad W. van der Vaart and   
    Wessel N. van Wieringen and   
            Mark A. van de Wiel   Modeling association between DNA copy
                                  number and gene expression with
                                  constrained piecewise linear regression
                                  splines  . . . . . . . . . . . . . . . . 823--845
           Joseph B. Kadane and   
    Ferdinand L. Næshagen   The number of killings in southern rural
                                  Norway, 1300--1569 . . . . . . . . . . . 846--859
           Travis L. Gaydos and   
           Nancy E. Heckman and   
           Mark Kirkpatrick and   
          J. R. Stinchcombe and   
            Johanna Schmitt and   
            Joel Kingsolver and   
                   J. S. Marron   Visualizing genetic constraints  . . . . 860--882
                   Jie Ding and   
             Lorenzo Trippa and   
             Xiaogang Zhong and   
            Giovanni Parmigiani   Hierarchical Bayesian analysis of
                                  somatic mutation data in cancer  . . . . 883--903
               Jiaping Wang and   
                 Hongtu Zhu and   
               Jianqing Fan and   
           Kelly Giovanello and   
                      Weili Lin   Multiscale adaptive smoothing models for
                                  the hemodynamic response function in
                                  fMRI . . . . . . . . . . . . . . . . . . 904--935
        Richard B. Chandler and   
                J. Andrew Royle   Spatially explicit models for inference
                                  about density in unmarked or partially
                                  marked populations . . . . . . . . . . . 936--954
         Alberto Sorrentino and   
           Adam M. Johansen and   
           John A. D. Aston and   
          Thomas E. Nichols and   
             Wilfrid S. Kendall   Dynamic filtering of static dipoles in
                                  magnetoencephalography . . . . . . . . . 955--988
            Kanti V. Mardia and   
    Christopher J. Fallaize and   
              Stuart Barber and   
         Richard M. Jackson and   
            Douglas L. Theobald   Bayesian alignment of similarity shapes  989--1009
                  Duy Q. Vu and   
            David R. Hunter and   
          Michael Schweinberger   Model-based clustering of large networks 1010--1039
            Gilles Faÿ and   
       Jacques Delabrouille and   
Gérard Kerkyacharian and   
               Dominique Picard   Testing the isotropy of high energy
                                  cosmic rays using spherical needlets . . 1040--1073
       Terrance D. Savitsky and   
               Susan M. Paddock   Bayesian nonparametric hierarchical
                                  modeling for multiple membership data in
                                  grouped attendance interventions . . . . 1074--1094
                  I-Ping Tu and   
            Shao-Hsuan Wang and   
                  Yuan-Fu Huang   Estimating the occurrence rate of DNA
                                  palindromes  . . . . . . . . . . . . . . 1095--1110
                  Ran Zhang and   
              Claudia Czado and   
                  Karin Sigloch   A Bayesian linear model for the
                                  high-dimensional inverse problem of
                                  seismic tomography . . . . . . . . . . . 1111--1138
       Bradford S. Westgate and   
            Dawn B. Woodard and   
          David S. Matteson and   
             Shane G. Henderson   Travel time estimation for ambulances
                                  using Bayesian data augmentation . . . . 1139--1161
           Michael L. Stein and   
                   Jie Chen and   
                 Mihai Anitescu   Stochastic approximation of score
                                  functions for Gaussian processes . . . . 1162--1191
            Florence Forbes and   
     Myriam Charras-Garrido and   
               Lamiae Azizi and   
                Senan Doyle and   
                   David Abrial   Spatial risk mapping for rare disease
                                  with hidden Markov fields and
                                  variational EM . . . . . . . . . . . . . 1192--1216
                   Makram Talih   A reference-invariant health disparity
                                  index based on Rényi divergence . . . . . 1217--1243
                    Yuao Hu and   
                    Ye Tian and   
                      Heng Lian   Letter to the Editor . . . . . . . . . . 1244--1246
             Michael R. Kosorok   Correction: Discussion of Brownian
                                  distance covariance  . . . . . . . . . . 1247
                  Andrew Gelman   Correction: Should the Democrats move to
                                  the left on economic policy? . . . . . . 1248

Annals of Applied Statistics
Volume 7, Number 3, September, 2013

           Kunlaya Soiaporn and   
             David Chernoff and   
              Thomas Loredo and   
              David Ruppert and   
                  Ira Wasserman   Multilevel Bayesian framework for
                                  modeling the production, propagation and
                                  detection of ultra-high energy cosmic
                                  rays . . . . . . . . . . . . . . . . . . 1249--1285
            William Kleiber and   
            Stephan R. Sain and   
          Matthew J. Heaton and   
         Michael Wiltberger and   
             C. Shane Reese and   
                  Derek Bingham   Parameter tuning for a multi-fidelity
                                  dynamical model of the magnetosphere . . 1286--1310
              Arwen Meister and   
                Ye Henry Li and   
               Bokyung Choi and   
                 Wing Hung Wong   Learning a nonlinear dynamical system
                                  model of gene regulation: a perturbed
                                  steady-state approach  . . . . . . . . . 1311--1333
           Audrey Qiuyan Fu and   
             Steven Russell and   
              Sarah J. Bray and   
            Simon Tavaré   Bayesian clustering of replicated
                                  time-course gene expression data with
                                  weak signals . . . . . . . . . . . . . . 1334--1361
          Edward L. Ionides and   
                  Zhen Wang and   
  José A. Tapia Granados   Macroeconomic effects on mortality
                                  revealed by panel analysis with
                                  nonlinear trends . . . . . . . . . . . . 1362--1385
              Jennifer Hill and   
                     Yu-Sung Su   Assessing lack of common support in
                                  causal inference using Bayesian
                                  nonparametrics: Implications for
                                  evaluating the effect of breastfeeding
                                  on children's cognitive outcomes . . . . 1386--1420
           Joshua P. French and   
                Stephan R. Sain   Spatio-temporal exceedance locations and
                                  confidence regions . . . . . . . . . . . 1421--1449
             Tevfik Aktekin and   
                Refik Soyer and   
                        Feng Xu   Assessment of mortgage default risk via
                                  Bayesian state space models  . . . . . . 1450--1473
                   Qing Pan and   
            Joseph L. Gastwirth   Estimating restricted mean job tenures
                                  in semi-competing risk data compensating
                                  victims of discrimination  . . . . . . . 1474--1496
               A. C. Thomas and   
          Samuel L. Ventura and   
            Shane T. Jensen and   
                     Stephen Ma   Competing process hazard function models
                                  for player ratings in ice hockey . . . . 1497--1524
                  George Mohler   Modeling and estimation of multi-source
                                  clustering in crime and security data    1525--1539
             Lingsong Zhang and   
               Haipeng Shen and   
               Jianhua Z. Huang   Robust regularized singular value
                                  decomposition with application to
                                  mortality data . . . . . . . . . . . . . 1540--1561
                  Dominik Liebl   Modeling and forecasting electricity
                                  spot prices: A functional data
                                  perspective  . . . . . . . . . . . . . . 1562--1592
         Stefano Castruccio and   
               Michael L. Stein   Global space--time models for climate
                                  ensembles  . . . . . . . . . . . . . . . 1593--1611
               Thomas Rusch and   
                   Ilro Lee and   
                Kurt Hornik and   
              Wolfgang Jank and   
                  Achim Zeileis   Influencing elections with statistics:
                                  Targeting voters with logistic
                                  regression trees . . . . . . . . . . . . 1612--1639
                 Ying Huang and   
           Margaret S. Pepe and   
                    Ziding Feng   Logistic regression analysis with
                                  standardized markers . . . . . . . . . . 1640--1662
                 Wanlu Deng and   
                   Zhi Geng and   
                     Hongzhe Li   Learning local directed acyclic graphs
                                  based on multivariate time series data   1663--1683
            Joseph Guinness and   
               Michael L. Stein   Interpolation of nonstationary high
                                  frequency spatial--temporal temperature
                                  data . . . . . . . . . . . . . . . . . . 1684--1708
            Roland Langrock and   
                      Ruth King   Maximum likelihood estimation of
                                  mark--recapture--recovery models in the
                                  presence of continuous covariates  . . . 1709--1732
             Johanna Hardin and   
       Stephan Ramon Garcia and   
                    David Golan   A method for generating realistic
                                  correlation matrices . . . . . . . . . . 1733--1762
                Lixun Zhang and   
               Yongtao Guan and   
          Brian P. Leaderer and   
            Theodore R. Holford   Estimating daily nitrogen dioxide level:
                                  Exploring traffic effects  . . . . . . . 1763--1777
           Charles J. Geyer and   
         Caroline E. Ridley and   
            Robert G. Latta and   
          Julie R. Etterson and   
                   Ruth G. Shaw   Local adaptation and genetic effects on
                                  fitness: Calculations for exponential
                                  family models with random effects  . . . 1778--1795
                    Lei Nie and   
               Zhiwei Zhang and   
               Daniel Rubin and   
                  Jianxiong Chu   Likelihood reweighting methods to reduce
                                  potential bias in noninferiority trials
                                  which rely on historical data to make
                                  inference  . . . . . . . . . . . . . . . 1796--1813
            Christopher Yau and   
          Christopher C. Holmes   A decision-theoretic approach for
                                  segmental classification . . . . . . . . 1814--1835

Annals of Applied Statistics
Volume 7, Number 4, December, 2013

               Susan M. Paddock   Editorial  . . . . . . . . . . . . . . . 1837
              Aaron Clauset and   
                   Ryan Woodard   Estimating the historical and future
                                  probabilities of large terrorist events  1838--1865
                  George Mohler   Discussion of ``Estimating the
                                  historical and future probabilities of
                                  large terrorist events'' by Aaron
                                  Clauset and Ryan Woodard . . . . . . . . 1866--1870
             Brian J. Reich and   
              Michael D. Porter   Discussion of ``Estimating the
                                  historical and future probabilities of
                                  large terrorist events'' by Aaron
                                  Clauset and Ryan Woodard . . . . . . . . 1871--1875
                   Gentry White   Discussion of ``Estimating the
                                  historical and future probabilities of
                                  large terrorist events'' by Aaron
                                  Clauset and Ryan Woodard . . . . . . . . 1876--1880
                      Jeff Gill   Discussion of ``Estimating the
                                  historical and future probabilities of
                                  large terrorist events'' by Aaron
                                  Clauset and Ryan Woodard . . . . . . . . 1881--1887
       Frederic Paik Schoenberg   Discussion of ``Estimating the
                                  historical and future probabilities of
                                  large terrorist events'' by Aaron
                                  Clauset and Ryan Woodard . . . . . . . . 1888--1890
                Qiurong Cui and   
                  Karl Rohe and   
                 Zhengjun Zhang   Discussion of ``Estimating the
                                  historical and future probabilities of
                                  large terrorist events'' by Aaron
                                  Clauset and Ryan Woodard . . . . . . . . 1891--1894
              Aaron Clauset and   
                   Ryan Woodard   Rejoinder of ``Estimating the historical
                                  and future probabilities of large
                                  terrorist events'' by Aaron Clauset and
                                  Ryan Woodard . . . . . . . . . . . . . . 1895--1897
             Mark A. Newell and   
                Dianne Cook and   
              Heike Hofmann and   
               Jean-Luc Jannink   An algorithm for deciding the number of
                                  clusters and validation using simulated
                                  data with application to exploring crop
                                  population structure . . . . . . . . . . 1898--1916
            William Fithian and   
                  Trevor Hastie   Finite-sample equivalence in statistical
                                  models for presence-only data  . . . . . 1917--1939
              Ming-Hung Kao and   
            Dibyen Majumdar and   
            Abhyuday Mandal and   
                   John Stufken   Maximin and maximin-efficient
                                  event-related fMRI designs under a
                                  nonlinear model  . . . . . . . . . . . . 1940--1959
Bärbel Finkenstädt and   
            Dan J. Woodcock and   
          Michal Komorowski and   
           Claire V. Harper and   
         Julian R. E. Davis and   
           Mike R. H. White and   
                  David A. Rand   Quantifying intrinsic and extrinsic
                                  noise in gene transcription using the
                                  linear noise approximation: An
                                  application to single cell data  . . . . 1960--1982
           Jeroen Pannekoek and   
             Natalie Shlomo and   
                    Ton De Waal   Calibrated imputation of numerical data
                                  under linear edit restrictions . . . . . 1983--2006
            Yuval Benjamini and   
                         Bin Yu   The shuffle estimator for explainable
                                  variance in fMRI experiments . . . . . . 2007--2033
                Giwhyun Lee and   
               Eunshin Byon and   
               Lewis Ntaimo and   
                        Yu Ding   Bayesian spline method for assessing
                                  extreme loads on wind turbines . . . . . 2034--2061
       Elizabeth A. Handorf and   
         Justin E. Bekelman and   
          Daniel F. Heitjan and   
                  Nandita Mitra   Evaluating costs with unmeasured
                                  confounding: A sensitivity analysis for
                                  the treatment effect . . . . . . . . . . 2062--2080
             Andrey Feuerverger   The tomb next door: an update to
                                  ``Statistical analysis of an
                                  archeological find'' . . . . . . . . . . 2081--2105
          Alisa J. Stephens and   
  Eric J. Tchetgen Tchetgen and   
             Victor De Gruttola   Flexible covariate-adjusted exact tests
                                  of randomized treatment effects with
                                  application to a trial of HIV education  2106--2137
                   Suyu Liu and   
               Guosheng Yin and   
                      Ying Yuan   Bayesian data augmentation dose finding
                                  with continual reassessment method and
                                  delayed toxicity . . . . . . . . . . . . 2138--2156
       Nicolas Städler and   
                 Sach Mukherjee   Penalized estimation in high-dimensional
                                  hidden Markov models with state-specific
                                  graphical models . . . . . . . . . . . . 2157--2179
                  Xun Jiang and   
               Dipak K. Dey and   
             Rachel Prunier and   
             Adam M. Wilson and   
              Kent E. Holsinger   A new class of flexible link functions
                                  with application to species
                                  co-occurrence in Cape Floristic Region   2180--2204
               Yuping Zhang and   
                   Ronald Davis   Principal trend analysis for time-course
                                  data with applications in genomic
                                  medicine . . . . . . . . . . . . . . . . 2205--2228
                Zhigen Zhao and   
                   Wei Wang and   
                        Zhi Wei   An empirical Bayes testing procedure for
                                  detecting variants in analysis of next
                                  generation sequencing data . . . . . . . 2229--2248
               Zhi-Sheng Ye and   
                  Yili Hong and   
                     Yimeng Xie   How do heterogeneities in operating
                                  environments affect field failure
                                  predictions and test planning? . . . . . 2249--2271
         Philip S. Boonstra and   
          Bhramar Mukherjee and   
            Jeremy M. G. Taylor   Bayesian shrinkage methods for partially
                                  observed data with many predictors . . . 2272--2292
          Alessio Farcomeni and   
             Daria Scacciatelli   Heterogeneity and behavioral response in
                                  continuous time capture--recapture, with
                                  application to street cannabis use in
                                  Italy  . . . . . . . . . . . . . . . . . 2293--2314
            Charles R. Doss and   
            Marc A. Suchard and   
                 Ian Holmes and   
          Midori Kato-Maeda and   
              Vladimir N. Minin   Fitting birth--death processes to panel
                                  data with applications to bacterial DNA
                                  fingerprinting . . . . . . . . . . . . . 2315--2335
          Alessandra Mattei and   
                     Fan Li and   
                Fabrizia Mealli   Exploiting multiple outcomes in Bayesian
                                  principal stratification analysis with
                                  application to the evaluation of a job
                                  training program . . . . . . . . . . . . 2336--2360
             Jonathan Gruhl and   
          Elena A. Erosheva and   
                  Paul K. Crane   A semiparametric approach to mixed
                                  outcome latent variable models:
                                  Estimating the association between
                                  cognition and regional brain volumes . . 2361--2383
    Jérémie Bigot   Fréchet means of curves for signal
                                  averaging and application to ECG data
                                  analysis . . . . . . . . . . . . . . . . 2384--2401
         Vasanthan Raghavan and   
              Aram Galstyan and   
       Alexander G. Tartakovsky   Hidden Markov models for the activity
                                  profile of terrorist groups  . . . . . . 2402--2430
         Edoardo M. Airoldi and   
               Xiaopei Wang and   
                   Xiaodong Lin   Multi-way blockmodels for analyzing
                                  coordinated high-dimensional responses   2431--2457


Annals of Applied Statistics
Volume 8, Number 1, March, 2014

             Curtis Storlie and   
             Blake Anderson and   
          Scott Vander Wiel and   
               Daniel Quist and   
                Curtis Hash and   
                   Nathan Brown   Stochastic identification of malware
                                  with dynamic traces  . . . . . . . . . . 1--18
        Alexander Volfovsky and   
                  Peter D. Hoff   Hierarchical array priors for ANOVA
                                  decompositions of cross-classified data  19--47
                   Fan Yang and   
             Scott A. Lorch and   
                 Dylan S. Small   Estimation of causal effects using
                                  instrumental variables with nonignorable
                                  missing covariates: Application to
                                  effect of type of delivery NICU on
                                  premature infants  . . . . . . . . . . . 48--73
            Annamaria Guolo and   
                Cristiano Varin   Beta regression for time series analysis
                                  of bounded data, with application to
                                  Canada Google$^\reg $ Flu Trends . . . . 74--88
              Yogesh Virkar and   
                  Aaron Clauset   Power-law distributions in binned
                                  empirical data . . . . . . . . . . . . . 89--119
          Bailey K. Fosdick and   
                  Peter D. Hoff   Separable factor analysis with
                                  applications to mortality data . . . . . 120--147
            Alberto Cassese and   
           Michele Guindani and   
          Mahlet G. Tadesse and   
         Francesco Falciani and   
                Marina Vannucci   A hierarchical Bayesian model for
                                  inference of copy number variants and
                                  their association to gene expression . . 148--175
               Xiaoquan Wen and   
               Matthew Stephens   Bayesian methods for genetic association
                                  analysis with heterogeneous subgroups:
                                  From meta-analyses to gene--environment
                                  interactions . . . . . . . . . . . . . . 176--203
 José R. Zubizarreta and   
         Ricardo D. Paredes and   
              Paul R. Rosenbaum   Matching for balance, pairing for
                                  heterogeneity in an observational study
                                  of the effectiveness of for-profit and
                                  not-for-profit high schools in Chile . . 204--231
              Darren Wraith and   
           Kerrie Mengersen and   
               Clair Alston and   
            Judith Rousseau and   
                  Tareq Hussein   Using informative priors in the
                                  estimation of mixtures over time with
                                  application to aerosol particle size
                                  distributions  . . . . . . . . . . . . . 232--258
               Ting-Li Chen and   
               Dai-Ni Hsieh and   
                  Hung Hung and   
                  I-Ping Tu and   
               Pei-Shien Wu and   
                 Yi-Ming Wu and   
              Wei-Hau Chang and   
                   Su-Yun Huang   $ \gamma $-SUP: a clustering algorithm
                                  for cryo-electron microscopy images of
                                  asymmetric particles . . . . . . . . . . 259--285
           Nicolle Clements and   
            Sanat K. Sarkar and   
                Zhigen Zhao and   
                   Dong-Yun Kim   Applying multiple testing procedures to
                                  detect change in East African vegetation 286--308
              David Rossell and   
Camille Stephan-Otto Attolini and   
              Manuel Kroiss and   
            Almond Stöcker   Quantifying alternative splicing from
                                  paired-end RNA-sequencing data . . . . . 309--330
                 E. G. Hill and   
                    E. H. Slate   A semi-parametric Bayesian model of
                                  inter- and intra-examiner agreement for
                                  periodontal probing depth  . . . . . . . 331--351
            Yen-Tsung Huang and   
       Tyler J. VanderWeele and   
                     Xihong Lin   Joint analysis of SNP and gene
                                  expression data in genetic association
                                  studies of complex diseases  . . . . . . 352--376
             Yacine Jernite and   
            Pierre Latouche and   
          Charles Bouveyron and   
             Patrick Rivera and   
              Laurent Jegou and   
 Stéphane Lamassé   The random subgraph model for the
                                  analysis of an ecclesiastical network in
                                  Merovingian Gaul . . . . . . . . . . . . 377--405
           Matthew Reimherr and   
                    Dan Nicolae   A functional data analysis approach for
                                  genetic association studies  . . . . . . 406--429
               Doyo G. Enki and   
            Angela Noufaily and   
            C. Paddy Farrington   A time-varying shared frailty model with
                                  application to infectious diseases . . . 430--447
                   Xin Wang and   
                    Ke Yuan and   
         Christoph Hellmayr and   
                    Wei Liu and   
              Florian Markowetz   Reconstructing evolving signalling
                                  networks by hidden Markov nested effects
                                  models . . . . . . . . . . . . . . . . . 448--480
                Ruth Heller and   
               Daniel Yekutieli   Replicability analysis for genome-wide
                                  association studies  . . . . . . . . . . 481--498
                 Jinzhu Jia and   
              Luke Miratrix and   
                     Bin Yu and   
               Brian Gawalt and   
          Laurent El Ghaoui and   
           Luke Barnesmoore and   
                 Sophie Clavier   Concise comparative summaries (CCS) of
                                  large text corpora with a human
                                  experiment . . . . . . . . . . . . . . . 499--529
                Jingyong Su and   
           Sebastian Kurtek and   
               Eric Klassen and   
                Anuj Srivastava   Statistical analysis of trajectories on
                                  Riemannian manifolds: Bird migration,
                                  hurricane tracking and video
                                  surveillance . . . . . . . . . . . . . . 530--552
              Kung-Sik Chan and   
                Jinzheng Li and   
          William Eichinger and   
                      Erwei Bai   Testing for shielding of special nuclear
                                  weapon materials . . . . . . . . . . . . 553--576
                 Fukang Zhu and   
                 Zongwu Cai and   
                     Liang Peng   Predictive regressions for macroeconomic
                                  data . . . . . . . . . . . . . . . . . . 577--594
              Hajo Holzmann and   
                Matthias Eulert   The role of the information set for
                                  forecasting --- with applications to
                                  risk management  . . . . . . . . . . . . 595--621
           Nicolas Raillard and   
             Pierre Ailliot and   
                   Jianfeng Yao   Modeling extreme values of processes
                                  observed at irregular time steps:
                                  Application to significant wave height   622--647

Annals of Applied Statistics
Volume 8, Number 2, June, 2014

                  Won Chang and   
               Murali Haran and   
                Roman Olson and   
                   Klaus Keller   Fast dimension-reduced climate model
                                  calibration and the effect of data
                                  aggregation  . . . . . . . . . . . . . . 649--673
          Susanne Ditlevsen and   
                 Adeline Samson   Estimation in the partially observed
                                  stochastic Morris--Lecar neuronal model
                                  with particle filter and stochastic
                                  approximation methods  . . . . . . . . . 674--702
      Mireille E. Schnitzer and   
       Mark J. van der Laan and   
         Erica E. M. Moodie and   
                Robert W. Platt   Effect of breastfeeding on
                                  gastrointestinal infection in infants: a
                                  targeted maximum likelihood approach for
                                  clustered longitudinal data  . . . . . . 703--725
            Brian D. M. Tom and   
         Vernon T. Farewell and   
                 Sheila M. Bird   Maximum likelihood and pseudo score
                                  approaches for parametric time-to-event
                                  analysis with informative entry times    726--746
           Damien McParland and   
      Isobel Claire Gormley and   
         Tyler H. McCormick and   
            Samuel J. Clark and   
Chodziwadziwa Whiteson Kabudula and   
              Mark A. Collinson   Clustering South African households
                                  based on their asset status using latent
                                  variable models  . . . . . . . . . . . . 747--776
                   Chi Song and   
                George C. Tseng   Hypothesis setting and order statistic
                                  for robust genomic meta-analysis . . . . 777--800
             Daisy Phillips and   
                 Debashis Ghosh   Testing the disjunction hypothesis using
                                  Voronoi diagrams with applications to
                                  genetics . . . . . . . . . . . . . . . . 801--823
                 Zheyang Wu and   
                 Yiming Sun and   
                 Shiquan He and   
                   Judy Cho and   
                Hongyu Zhao and   
                    Jiashun Jin   Detection boundary and Higher Criticism
                                  approach for rare and weak genetic
                                  effects  . . . . . . . . . . . . . . . . 824--851
              Isabel Molina and   
           Balgobin Nandram and   
                   J. N. K. Rao   Small area estimation of general
                                  parameters with application to poverty
                                  indicators: a hierarchical Bayes
                                  approach . . . . . . . . . . . . . . . . 852--885
            Inna Chervoneva and   
              Boris Freydin and   
              Brian Hipszer and   
    Tatiyana V. Apanasovich and   
              Jeffrey I. Joseph   Estimation of nonlinear differential
                                  equation model for glucose-insulin
                                  dynamics in type I diabetic patients
                                  using generalized smoothing  . . . . . . 886--904
        Olga Vsevolozhskaya and   
             Mark Greenwood and   
                 Dmitri Holodov   Pairwise comparison of treatment levels
                                  in functional analysis of variance with
                                  application to erythrocyte hemolysis . . 905--925
                Gagan Sidhu and   
                    Brian Caffo   MONEYBaRL: Exploiting pitcher
                                  decision-making using Reinforcement
                                  Learning . . . . . . . . . . . . . . . . 926--955
         Nicholas J. Horton and   
               Daniell Toth and   
                   Polly Phipps   Adjusting models of ordered multinomial
                                  outcomes for nonignorable nonresponse in
                                  the occupational employment statistics
                                  survey . . . . . . . . . . . . . . . . . 956--973
          Joshua N. Sampson and   
               Bill Wheeler and   
                    Peng Li and   
                    Jianxin Shi   Leveraging local identity-by-descent
                                  increases the power of case/control GWAS
                                  with related individuals . . . . . . . . 974--998
                  Yize Zhao and   
                  Jian Kang and   
                     Tianwei Yu   A Bayesian nonparametric mixture model
                                  for selecting genes and gene subnetworks 999--1021
                Zhaonan Sun and   
              Thomas Kuczek and   
                         Yu Zhu   Statistical calibration of qRT-PCR,
                                  microarray and RNA-Seq gene expression
                                  data with measurement error models . . . 1022--1044
               Xuejing Wang and   
                    Bin Nan and   
                     Ji Zhu and   
                  Robert Koeppe   Regularized $3$D functional regression
                                  for brain image data via Haar wavelets   1045--1064
         Finbarr O'Sullivan and   
                  Mark Muzi and   
           David A. Mankoff and   
              Janet F. Eary and   
        Alexander M. Spence and   
               Kenneth A. Krohn   Voxel-level mapping of tracer kinetics
                                  in PET studies: a statistical approach
                                  emphasizing tissue life tables . . . . . 1065--1094
                    Tian Ge and   
   Nicole Müller-Lenke and   
          Kerstin Bendfeldt and   
          Thomas E. Nichols and   
             Timothy D. Johnson   Analysis of multiple sclerosis lesions
                                  via spatially varying coefficients . . . 1095--1118
                Zhigang Yao and   
                William F. Eddy   A statistical approach to the inverse
                                  problem in magnetoencephalography  . . . 1119--1144
      François Caron and   
               Yee Whye Teh and   
          Thomas Brendan Murphy   Bayesian nonparametric Plackett--Luce
                                  models for the analysis of preferences
                                  for college degree programmes  . . . . . 1145--1181
                   Jing Qin and   
            Tanya P. Garcia and   
                 Yanyuan Ma and   
              Ming-Xin Tang and   
               Karen Marder and   
                   Yuanjia Wang   Combining isotonic regression and EM
                                  algorithm to predict genetic risk under
                                  monotonicity constraint  . . . . . . . . 1182--1208
                Seongho Kim and   
                Ming Ouyang and   
               Jaesik Jeong and   
               Changyu Shen and   
                    Xiang Zhang   A new method of peak detection for
                                  analysis of comprehensive
                                  two-dimensional gas chromatography mass
                                  spectrometry data  . . . . . . . . . . . 1209--1231
            Jung-Ying Tzeng and   
                  Wenbin Lu and   
                   Fang-Chi Hsu   Gene-level pharmacogenetic analysis on
                                  survival outcomes using gene-trait
                                  similarity regression  . . . . . . . . . 1232--1255
 Ville A. Satopää and   
            Shane T. Jensen and   
         Barbara A. Mellers and   
          Philip E. Tetlock and   
                  Lyle H. Ungar   Probability aggregation in time-series:
                                  Dynamic hierarchical modeling of sparse
                                  expert beliefs . . . . . . . . . . . . . 1256--1280

Annals of Applied Statistics
Volume 8, Number 3, September, 2014

               Emily B. Fox and   
          Michael C. Hughes and   
           Erik B. Sudderth and   
              Michael I. Jordan   Joint modeling of multiple time series
                                  via the beta process with application to
                                  motion capture segmentation  . . . . . . 1281--1313
              Sarat C. Dass and   
             Chae Young Lim and   
                Tapabrata Maiti   A generalized mixed model framework for
                                  assessing fingerprint individuality in
                                  presence of varying image quality  . . . 1314--1340
             Daniel Cervone and   
           Natesh S. Pillai and   
               Debdeep Pati and   
               Ross Berbeco and   
               John Henry Lewis   A location-mixture autoregressive model
                                  for online forecasting of lung tumor
                                  motion . . . . . . . . . . . . . . . . . 1341--1371
               Morgan Kelly and   
   Cormac Ó Gráda   Change points and temporal dependence in
                                  reconstructions of annual temperature:
                                  Did Europe experience a Little Ice Age?  1372--1394
             Arman Sabbaghi and   
        Tirthankar Dasgupta and   
                Qiang Huang and   
                    Jizhe Zhang   Inference for deformation and
                                  interference in $3$D printing  . . . . . 1395--1415
             Abel Rodriguez and   
                David B. Dunson   Functional clustering in nested designs:
                                  Modeling variability in reproductive
                                  epidemiology studies . . . . . . . . . . 1416--1442
Veerabhadran Baladandayuthapani and   
             Rajesh Talluri and   
                    Yuan Ji and   
           Kevin R. Coombes and   
                  Yiling Lu and   
          Bryan T. Hennessy and   
          Michael A. Davies and   
                Bani K. Mallick   Bayesian sparse graphical models for
                                  classification with application to
                                  protein expression data  . . . . . . . . 1443--1468
              Bahman Afsari and   
      Ulisses M. Braga-Neto and   
                   Donald Geman   Rank discriminants for predicting
                                  phenotypes from RNA expression . . . . . 1469--1491
                 Sixia Chen and   
                  Jae-Kwang Kim   Two-phase sampling experiment for
                                  propensity score estimation in
                                  self-selected samples  . . . . . . . . . 1492--1515
          A. Paula Palacios and   
     J. Miguel Marín and   
         Emiliano J. Quinto and   
               Michael P. Wiper   Bayesian modeling of bacterial growth
                                  for multiple populations . . . . . . . . 1516--1537
           Nikolay Bliznyuk and   
    Christopher J. Paciorek and   
              Joel Schwartz and   
                    Brent Coull   Nonlinear predictive latent process
                                  models for integrating spatio-temporal
                                  exposure data from multiple sources  . . 1538--1560
                   Jie Peng and   
              Debashis Paul and   
         Hans-Georg Müller   Time-warped growth processes, with
                                  applications to the modeling of
                                  boom--bust cycles in house prices  . . . 1561--1582
               Tauhid Zaman and   
               Emily B. Fox and   
                Eric T. Bradlow   A Bayesian approach for predicting the
                                  popularity of tweets . . . . . . . . . . 1583--1611
            Sebastian Meyer and   
                  Leonhard Held   Power-law models for infectious disease
                                  spread . . . . . . . . . . . . . . . . . 1612--1639
             James V. Zidek and   
             Gavin Shaddick and   
              Carolyn G. Taylor   Reducing estimation bias in adaptively
                                  changing monitoring networks with
                                  preferential site selection  . . . . . . 1640--1670
              Rensheng Zhou and   
            Nicoleta Serban and   
                  Nagi Gebraeel   Degradation-based residual life
                                  prediction under different environments  1671--1689
         Raymond K. W. Wong and   
                Paul Baines and   
              Alexander Aue and   
           Thomas C. M. Lee and   
               Vinay L. Kashyap   Automatic estimation of flux
                                  distributions of astrophysical source
                                  populations  . . . . . . . . . . . . . . 1690--1712
                Zhisheng Ye and   
              Hon Keung Tony Ng   On analysis of incomplete field failure
                                  data . . . . . . . . . . . . . . . . . . 1713--1727
               Ander Wilson and   
             Ana G. Rappold and   
              Lucas M. Neas and   
                 Brian J. Reich   Modeling the effect of temperature on
                                  ozone-related mortality  . . . . . . . . 1728--1749
              Justin Bleich and   
              Adam Kapelner and   
           Edward I. George and   
                Shane T. Jensen   Variable selection for BART: an
                                  application to gene regulation . . . . . 1750--1781
                 Xinxin Zhu and   
          Kenneth P. Bowman and   
                 Marc G. Genton   Incorporating geostrophic wind
                                  information for improved space--time
                                  short-term wind speed forecasting  . . . 1782--1799
                  Jian Kang and   
          Thomas E. Nichols and   
               Tor D. Wager and   
             Timothy D. Johnson   A Bayesian hierarchical spatial point
                                  process model for multi-type
                                  neuroimaging meta-analysis . . . . . . . 1800--1824
             Takao Kumazawa and   
                 Yosihiko Ogata   Nonstationary ETAS models for
                                  nonstandard earthquakes  . . . . . . . . 1825--1852
            James D. Wilson and   
                  Simi Wang and   
             Peter J. Mucha and   
            Shankar Bhamidi and   
                Andrew B. Nobel   A testing based extraction algorithm for
                                  identifying significant communities in
                                  networks . . . . . . . . . . . . . . . . 1853--1891
             Chris J. Oates and   
                Jim Korkola and   
                Joe W. Gray and   
                 Sach Mukherjee   Joint estimation of multiple related
                                  biological networks  . . . . . . . . . . 1892--1919

Annals of Applied Statistics
Volume 8, Number 4, December, 2014

               Susan M. Paddock   Editorial: Spatial accessibility of
                                  pediatric primary healthcare:
                                  Measurement and inference  . . . . . . . 1921--1921
             Mallory Nobles and   
            Nicoleta Serban and   
                    Julie Swann   Spatial accessibility of pediatric
                                  primary healthcare: Measurement and
                                  inference  . . . . . . . . . . . . . . . 1922--1946
              Laura A. Hatfield   Discussion of ``Spatial accessibility of
                                  pediatric primary healthcare:
                                  Measurement and inference''  . . . . . . 1947--1951
             Amelia M. Haviland   Discussion of ``Spatial accessibility of
                                  pediatric primary healthcare:
                                  Measurement and inference''  . . . . . . 1952--1955
                Lance A. Waller   Discussion of ``Spatial accessibility of
                                  pediatric primary healthcare:
                                  Measurement and inference''  . . . . . . 1956--1960
             Mallory Nobles and   
            Nicoleta Serban and   
                    Julie Swann   Rejoinder: ``Spatial accessibility of
                                  pediatric primary healthcare:
                                  Measurement and inference''  . . . . . . 1961--1965
               Luis Barboza and   
                      Bo Li and   
          Martin P. Tingley and   
               Frederi G. Viens   Reconstructing past temperatures from
                                  natural proxies and estimated climate
                                  forcings using short- and long-memory
                                  models . . . . . . . . . . . . . . . . . 1966--2001
           Colin B. Fogarty and   
                 Dylan S. Small   Equivalence testing for functional data
                                  with an application to comparing
                                  pulmonary function devices . . . . . . . 2002--2026
             Michael Messer and   
          Marietta Kirchner and   
            Julia Schiemann and   
              Jochen Roeper and   
            Ralph Neininger and   
                 Gaby Schneider   A multiple filter test for the detection
                                  of rate changes in renewal processes
                                  with varying variance  . . . . . . . . . 2027--2067
             Abel Rodriguez and   
             Scott C. Schmidler   Bayesian protein structure alignment . . 2068--2095
 José R. Zubizarreta and   
             Dylan S. Small and   
              Paul R. Rosenbaum   Isolation in the construction of natural
                                  experiments  . . . . . . . . . . . . . . 2096--2121
            Leontine Alkema and   
                    Jin Rou New   Global estimation of child mortality
                                  using a Bayesian B-spline bias-reduction
                                  model  . . . . . . . . . . . . . . . . . 2122--2149
                Shaowu Tang and   
                  Ying Ding and   
            Etienne Sibille and   
           Jeffrey S. Mogil and   
       William R. Lariviere and   
                George C. Tseng   Imputation of truncated $p$-values for
                                  meta-analysis methods and its genomic
                                  application  . . . . . . . . . . . . . . 2150--2174
           Vadim Zipunnikov and   
               Sonja Greven and   
              Haochang Shou and   
             Brian S. Caffo and   
            Daniel S. Reich and   
         Ciprian M. Crainiceanu   Longitudinal high-dimensional principal
                                  components analysis with application to
                                  diffusion tensor imaging of multiple
                                  sclerosis  . . . . . . . . . . . . . . . 2175--2202
  Matthias Steinrücken and   
              Anand Bhaskar and   
                    Yun S. Song   A novel spectral method for inferring
                                  general diploid selection from time
                                  series genetic data  . . . . . . . . . . 2203--2222
         Theodoros Economou and   
        David B. Stephenson and   
        Christopher A. T. Ferro   Spatio-temporal modelling of extreme
                                  storms . . . . . . . . . . . . . . . . . 2223--2246
                Andrew Bray and   
                    Ka Wong and   
        Christopher D. Barr and   
       Frederic Paik Schoenberg   Voronoi residual analysis of spatial
                                  point process models with applications
                                  to California earthquake forecasts . . . 2247--2267
        Daniel Manrique-Vallier   Longitudinal Mixed Membership trajectory
                                  models for disability survey data  . . . 2268--2291
                  Jiahan Li and   
                  Wei Zhong and   
                   Runze Li and   
                    Rongling Wu   A fast algorithm for detecting
                                  gene--gene interactions in genome-wide
                                  association studies  . . . . . . . . . . 2292--2318
             Elasma Milanzi and   
               Ariel Alonso and   
           Christophe Buyck and   
          Geert Molenberghs and   
                    Luc Bijnens   A permutational-splitting sample
                                  procedure to quantify expert opinion on
                                  clusters of chemical compounds using
                                  high-dimensional data  . . . . . . . . . 2319--2335
               Zhiwei Zhang and   
                    Lei Nie and   
               Guoxing Soon and   
                       Aiyi Liu   The use of covariates and random effects
                                  in evaluating predictive biomarkers
                                  under a potential outcome framework  . . 2336--2355
          Cecilia A. Cotton and   
            Patrick J. Heagerty   Evaluating epoetin dosing strategies
                                  using observational longitudinal data    2356--2377
           Anne M. Presanis and   
          Richard G. Pebody and   
            Paul J. Birrell and   
            Brian D. M. Tom and   
             Helen K. Green and   
             Hayley Durnall and   
            Douglas Fleming and   
             Daniela De Angelis   Synthesising evidence to estimate
                                  pandemic (2009) A/H1N1 influenza
                                  severity in 2009--2011 . . . . . . . . . 2378--2403
               Mauricio Sadinle   Detecting duplicates in a homicide
                                  registry using a Bayesian partitioning
                                  approach . . . . . . . . . . . . . . . . 2404--2434
               Yingying Fan and   
              Natasha Foutz and   
            Gareth M. James and   
                  Wolfgang Jank   Functional response additive model
                                  estimation with online virtual stock
                                  markets  . . . . . . . . . . . . . . . . 2435--2460
        Brett T. McClintock and   
          Larissa L. Bailey and   
            Brian P. Dreher and   
                William A. Link   Probit models for capture--recapture
                                  data subject to imperfect detection,
                                  individual heterogeneity and
                                  misidentification  . . . . . . . . . . . 2461--2484
          Andrea Mercatanti and   
                         Fan Li   Do debit cards increase household
                                  spending? Evidence from a semiparametric
                                  causal analysis of a survey  . . . . . . 2485--2508
               Casey Olives and   
            Lianne Sheppard and   
       Johan Lindström and   
            Paul D. Sampson and   
            Joel D. Kaufman and   
                 Adam A. Szpiro   Reduced-rank spatio-temporal modeling of
                                  air pollution concentrations in the
                                  Multi-Ethnic Study of Atherosclerosis
                                  and Air Pollution  . . . . . . . . . . . 2509--2537
            K. S. McGarrity and   
                 J. Sietsma and   
                   G. Jongbloed   Nonparametric inference in a
                                  stereological model with oriented
                                  cylinders applied to dual phase steel    2538--2566
                 Georg M. Goerg   Usage of the Lambert $W$ function in
                                  statistics . . . . . . . . . . . . . . . 2567--2567


Annals of Applied Statistics
Volume 9, Number 1, March, 2015

                  Guohui Wu and   
             Scott H. Holan and   
           Charles H. Nilon and   
           Christopher K. Wikle   Bayesian binomial mixture models for
                                  estimating abundance in ecological
                                  monitoring studies . . . . . . . . . . . 1--26
                 Jacob Bien and   
                 Noah Simon and   
              Robert Tibshirani   Convex hierarchical testing of
                                  interactions . . . . . . . . . . . . . . 27--42
               Haiming Zhou and   
             Timothy Hanson and   
             Alejandro Jara and   
                   Jiajia Zhang   Modeling county level breast cancer
                                  survival data using a covariate-adjusted
                                  frailty proportional hazards model . . . 43--68
             Jabed H. Tomal and   
           William J. Welch and   
                 Ruben H. Zamar   Ensembling classification models based
                                  on phalanxes of variables with
                                  applications in drug discovery . . . . . 69--93
           Alexander Franks and   
              Andrew Miller and   
                 Luke Bornn and   
                Kirk Goldsberry   Characterizing the spatial structure of
                                  defensive skill in professional
                                  basketball . . . . . . . . . . . . . . . 94--121
            \cSeyda Ertekin and   
              Cynthia Rudin and   
             Tyler H. McCormick   Reactive point processes: a new approach
                                  to predicting power failures in
                                  underground electrical systems . . . . . 122--144
           Ephraim M. Hanks and   
            Mevin B. Hooten and   
               Mat W. Alldredge   Continuous-time discrete-space models
                                  for animal movement  . . . . . . . . . . 145--165
               Yaonan Zhang and   
           Eric D. Kolaczyk and   
               Bruce D. Spencer   Estimating network degree distributions
                                  under sampling: an inverse problem, with
                                  applications to monitoring social media
                                  networks . . . . . . . . . . . . . . . . 166--199
             Paul Fearnhead and   
                 Shoukai Yu and   
              Patrick Biggs and   
            Barbara Holland and   
                   Nigel French   Estimating the relative rate of
                                  recombination to mutation in bacteria
                                  from single-locus variants using
                                  composite likelihood methods . . . . . . 200--224
                Zhishi Wang and   
                 Qiuling He and   
                Bret Larget and   
              Michael A. Newton   A multi-functional analyzer uses
                                  parameter constraints to improve the
                                  efficiency of model-based gene-set
                                  analysis . . . . . . . . . . . . . . . . 225--246
           Kay H. Brodersen and   
           Fabian Gallusser and   
                Jim Koehler and   
               Nicolas Remy and   
                Steven L. Scott   Inferring causal impact using Bayesian
                                  structural time-series models  . . . . . 247--274
             Kara A. Fulton and   
                Danping Liu and   
           Denise L. Haynie and   
                 Paul S. Albert   Mixed model and estimating equation
                                  approaches for zero inflation in
                                  clustered binary response data with
                                  application to a dating violence study   275--299
          Y. X. Rachel Wang and   
                 Keni Jiang and   
           Lewis J. Feldman and   
            Peter J. Bickel and   
                   Haiyan Huang   Inferring gene--gene interactions and
                                  functional modules using sparse
                                  canonical correlation analysis . . . . . 300--323
          Dominique Guillot and   
            Bala Rajaratnam and   
              Julien Emile-Geay   Statistical paleoclimate reconstructions
                                  via Markov random fields . . . . . . . . 324--352
                   Sai Xiao and   
          Athanasios Kottas and   
             Bruno Sansó   Modeling for seasonal marked point
                                  processes: An analysis of evolving
                                  hurricane occurrences  . . . . . . . . . 353--382
             Cecile Low-Kam and   
          Donatello Telesca and   
                 Zhaoxia Ji and   
              Haiyuan Zhang and   
                   Tian Xia and   
            Jeffrey I. Zink and   
                   Andre E. Nel   A Bayesian regression tree approach to
                                  identify the effect of nanoparticles'
                                  properties on toxicity profiles  . . . . 383--401
             Lorenzo Trippa and   
               Levi Waldron and   
         Curtis Huttenhower and   
            Giovanni Parmigiani   Bayesian nonparametric cross-study
                                  validation of prediction methods . . . . 402--428
               Zhixiang Lin and   
         Stephan J. Sanders and   
                Mingfeng Li and   
               Nenad Sestan and   
           Matthew W. State and   
                    Hongyu Zhao   A Markov random field-based approach to
                                  characterizing human brain development
                                  using spatial--temporal transcriptome
                                  data . . . . . . . . . . . . . . . . . . 429--451
              Hongwei Shang and   
                    Jun Yan and   
                   Xuebin Zhang   A two-step approach to model
                                  precipitation extremes in California
                                  based on max-stable and marginal point
                                  processes  . . . . . . . . . . . . . . . 452--473
             Martin L. Hazelton   Network tomography for integer-valued
                                  traffic  . . . . . . . . . . . . . . . . 474--506
        Simon E. F. Spencer and   
             Steven M. Hill and   
                 Sach Mukherjee   Inferring network structure from
                                  interventional time-course experiments   507--524
              Cinzia Carota and   
         Maurizio Filippone and   
          Roberto Leombruni and   
               Silvia Polettini   Bayesian nonparametric disclosure risk
                                  estimation via mixed effects log-linear
                                  models . . . . . . . . . . . . . . . . . 525--546

Annals of Applied Statistics
Volume 9, Number 2, June, 2015

               Niamh Cahill and   
             Andrew C. Kemp and   
         Benjamin P. Horton and   
              Andrew C. Parnell   Modeling sea-level change using
                                  errors-in-variables integrated Gaussian
                                  processes  . . . . . . . . . . . . . . . 547--571
        Forrest W. Crawford and   
            Robert E. Weiss and   
                Marc A. Suchard   Sex, lies and self-reported counts:
                                  Bayesian mixture models for heaping in
                                  longitudinal count data via birth-death
                                  processes  . . . . . . . . . . . . . . . 572--596
               Wenfei Zhang and   
                       Ying Wei   Regression based principal component
                                  analysis for sparse functional data with
                                  applications to screening growth paths   597--620
                  Juhee Lee and   
          Peter Müller and   
         Kamalakar Gulukota and   
                        Yuan Ji   A Bayesian feature allocation model for
                                  tumor heterogeneity  . . . . . . . . . . 621--639
                  Jiahan Li and   
                 Zhong Wang and   
                   Runze Li and   
                    Rongling Wu   Bayesian group Lasso for nonparametric
                                  varying-coefficient models with
                                  application to functional genome-wide
                                  association studies  . . . . . . . . . . 640--664
               Heejung Shim and   
               Matthew Stephens   Wavelet-based genetic association
                                  analysis of functional phenotypes
                                  arising from high-throughput sequencing
                                  assays . . . . . . . . . . . . . . . . . 665--686
                     Fan Li and   
             Tingting Zhang and   
                Quanli Wang and   
         Marlen Z. Gonzalez and   
             Erin L. Maresh and   
                  James A. Coan   Spatial Bayesian variable selection and
                                  grouping for high-dimensional
                                  scalar-on-image regression . . . . . . . 687--713
               Xiangdong Gu and   
                Yunsheng Ma and   
           Raji Balasubramanian   Semiparametric time to event models in
                                  the presence of error-prone,
                                  self-reported outcomes --- With
                                  application to the Women's Health
                                  Initiative . . . . . . . . . . . . . . . 714--730
    Jonathan S. Schildcrout and   
            Paul J. Rathouz and   
           Leila R. Zelnick and   
           Shawn P. Garbett and   
            Patrick J. Heagerty   Biased sampling designs to improve
                                  research efficiency: Factors influencing
                                  pulmonary function over time in children
                                  with asthma  . . . . . . . . . . . . . . 731--753
               Giles Hooker and   
              Stephen P. Ellner   Goodness of fit in nonlinear dynamics:
                                  Misspecified rates or misspecified
                                  states?  . . . . . . . . . . . . . . . . 754--776
           Laura Anderlucci and   
                  Cinzia Viroli   Covariance pattern mixture models for
                                  the analysis of multivariate
                                  heterogeneous longitudinal data  . . . . 777--800
               Stefan Wager and   
          Alexander Blocker and   
                   Niall Cardin   Weakly supervised clustering: Learning
                                  fine-grained signals from coarse labels  801--820
                   Jian Guo and   
                  Jie Cheng and   
           Elizaveta Levina and   
         George Michailidis and   
                         Ji Zhu   Estimating heterogeneous graphical
                                  models for discrete data with an
                                  application to roll call voting  . . . . 821--848
            John C. Jackson and   
             Paul S. Albert and   
                   Zhiwei Zhang   A two-state mixed hidden Markov model
                                  for risky teenage driving behavior . . . 849--865
          Francis K. C. Hui and   
            David I. Warton and   
                Scott D. Foster   Multi-species distribution modeling
                                  using penalized mixture of regressions   866--882
               Yicheng Kang and   
              Xiaodong Gong and   
                   Jiti Gao and   
                     Peihua Qiu   Jump detection in generalized
                                  error-in-variables regression with an
                                  application to Australian health tax
                                  policies . . . . . . . . . . . . . . . . 883--900
                  Shiqi Cui and   
              Subharup Guha and   
       Marco A. R. Ferreira and   
               Allison N. Tegge   hmmSeq: a hidden Markov model for
                                  detecting differentially expressed genes
                                  from RNA-seq data  . . . . . . . . . . . 901--925
         Vasileios Maroulas and   
         Andreas Nebenführ   Tracking rapid intracellular movements:
                                  a Bayesian random set approach . . . . . 926--949
                     Jie Hu and   
             Zhongying Zhao and   
  Hari Krishna Yalamanchili and   
                Junwen Wang and   
                   Kenny Ye and   
                    Xiaodan Fan   Bayesian detection of embryonic gene
                                  expression onset in \em C. elegans . . . 950--968
          Gabriela B. Cybis and   
        Janet S. Sinsheimer and   
             Trevor Bedford and   
           Alison E. Mather and   
             Philippe Lemey and   
                Marc A. Suchard   Assessing phenotypic correlation through
                                  the multivariate phylogenetic latent
                                  liability model  . . . . . . . . . . . . 969--991
                   Makram Talih   Examining socioeconomic health
                                  disparities using a rank-dependent Rényi
                                  index  . . . . . . . . . . . . . . . . . 992--1023
                Nadja Klein and   
               Thomas Kneib and   
                Stefan Lang and   
                 Alexander Sohn   Bayesian structured additive
                                  distributional regression with an
                                  application to regional income
                                  inequality in Germany  . . . . . . . . . 1024--1052
                Sandra Safo and   
                  Xiao Song and   
                Kevin K. Dobbin   Sample size determination for training
                                  cancer classifiers from microarray and
                                  RNA-seq data . . . . . . . . . . . . . . 1053--1075
            Philip T. Reiss and   
                    Lan Huo and   
                Yihong Zhao and   
                Clare Kelly and   
                  R. Todd Ogden   Wavelet-domain regression and predictive
                                  inference in psychiatric neuroimaging    1076--1101

Annals of Applied Statistics
Volume 9, Number 3, September, 2015

         Ma\lgorzata Bogdan and   
         Ewout van den Berg and   
             Chiara Sabatti and   
                  Weijie Su and   
           Emmanuel J. Cand\`es   SLOPE-Adaptive variable selection via
                                  convex optimization  . . . . . . . . . . 1103--1140
          Robert B. Gramacy and   
              Derek Bingham and   
        James Paul Holloway and   
       Michael J. Grosskopf and   
          Carolyn C. Kuranz and   
               Erica Rutter and   
              Matt Trantham and   
                  R. Paul Drake   Calibrating a large computer experiment
                                  simulating radiative shock hydrodynamics 1141--1168
                  Peter D. Hoff   Multilinear tensor regression for
                                  longitudinal relational data . . . . . . 1169--1193
       Lasse Holmström and   
              Liisa Ilvonen and   
          Heikki Seppä and   
                     Siim Veski   A Bayesian spatiotemporal model for
                                  reconstructing climate from multiple
                                  pollen records . . . . . . . . . . . . . 1194--1225
              Luke B. Smith and   
         Montserrat Fuentes and   
        Penny Gordon-Larsen and   
                 Brian J. Reich   Quantile regression for mixed models
                                  with an application to examine blood
                                  pressure trends in China . . . . . . . . 1226--1246
            Rachael Maltiel and   
          Adrian E. Raftery and   
         Tyler H. McCormick and   
                Aaron J. Baraff   Estimating population size using the
                                  network scale up method  . . . . . . . . 1247--1277
        Sergiusz Wesolowski and   
        Robert J. Contreras and   
                         Wei Wu   A new framework for Euclidean summary
                                  statistics in the neural spike train
                                  space  . . . . . . . . . . . . . . . . . 1278--1297
            Fabian E. Bachl and   
              Alex Lenkoski and   
 Thordis L. Thorarinsdottir and   
             Christoph S. Garbe   Bayesian motion estimation for dust
                                  aerosols . . . . . . . . . . . . . . . . 1298--1327
          Michael Scheuerer and   
              David Möller   Probabilistic wind speed forecasting on
                                  a grid based on ensemble model output
                                  statistics . . . . . . . . . . . . . . . 1328--1349
            Benjamin Letham and   
              Cynthia Rudin and   
         Tyler H. McCormick and   
                  David Madigan   Interpretable classifiers using rules
                                  and Bayesian analysis: Building a better
                                  stroke prediction model  . . . . . . . . 1350--1371
       Alexandra M. Schmidt and   
  Marco A. Rodríguez and   
         Estelina S. Capistrano   Population counts along elliptical
                                  habitat contours: Hierarchical modeling
                                  using Poisson-lognormal mixtures with
                                  nonstationary spatial structure  . . . . 1372--1393
                     Matt Taddy   Distributed multinomial regression . . . 1394--1414
                Jukka Ranta and   
           Roland Lindqvist and   
             Ingrid Hansson and   
            Pirkko Tuominen and   
                  Maarten Nauta   A Bayesian approach to the evaluation of
                                  risk-based microbiological criteria for
                                  Campylobacter in broiler meat  . . . . . 1415--1432
           Estela Bee Dagum and   
             Silvia Bianconcini   A new set of asymmetric filters for
                                  tracking the short-term trend in
                                  real-time  . . . . . . . . . . . . . . . 1433--1458
            P. Richard Hahn and   
           Indranil Goswami and   
                   Carl F. Mela   A Bayesian hierarchical model for
                                  inferring player strategy types in a
                                  number guessing game . . . . . . . . . . 1459--1483
             J. R. Lockwood and   
       Terrance D. Savitsky and   
            Daniel F. McCaffrey   Inferring constructs of effective
                                  teaching from classroom observations: an
                                  application of Bayesian exploratory
                                  factor analysis without restrictions . . 1484--1509
             D. E. Fishkind and   
                V. Lyzinski and   
                     H. Pao and   
                    L. Chen and   
                   C. E. Priebe   Vertex nomination schemes for membership
                                  prediction . . . . . . . . . . . . . . . 1510--1532
           Irina Ostrovnaya and   
      Venkatraman E. Seshan and   
                  Colin B. Begg   Using somatic mutation data to test
                                  tumors for clonal relatedness  . . . . . 1533--1548
           Thomas A. Murray and   
             Brian P. Hobbs and   
              Bradley P. Carlin   Combining nonexchangeable functional or
                                  survival data sources in oncology using
                                  generalized mixture commensurate priors  1549--1570
                     Li Liu and   
                   Jing Lei and   
                 Kathryn Roeder   Network assisted analysis to reveal the
                                  genetic basis of autism  . . . . . . . . 1571--1600
                Zhao-Hua Lu and   
               Sy-Miin Chow and   
            Andrew Sherwood and   
                     Hongtu Zhu   Bayesian analysis of ambulatory blood
                                  pressure dynamics with application to
                                  irregularly spaced sparse data . . . . . 1601--1620
                     Jun Ye and   
                   Yehua Li and   
                   Yongtao Guan   Joint modeling of longitudinal drug
                                  using pattern and time to first relapse
                                  in cocaine dependence treatment data . . 1621--1642
            Thierry Chekouo and   
            Alejandro Murua and   
         Wolfgang Raffelsberger   The Gibbs-plaid biclustering model . . . 1643--1670
             Mikael Kuusela and   
            Victor M. Panaretos   Statistical unfolding of elementary
                                  particle spectra: Empirical Bayes
                                  estimation and bias-corrected
                                  uncertainty quantification . . . . . . . 1671--1705
              David Rossell and   
Camille Stephan-Otto Attolini and   
              Manuel Kroiss and   
            Almond Stöcker   Corrigendum: Quantifying alternative
                                  splicing from paired-end RNA-seq data    1706--1707

Annals of Applied Statistics
Volume 9, Number 4, December, 2015

               Scott Powers and   
              Trevor Hastie and   
              Robert Tibshirani   Customized training with an application
                                  to mass spectrometric imaging of cancer
                                  tissue . . . . . . . . . . . . . . . . . 1709--1725
          Charles Bouveyron and   
         Etienne Côme and   
                 Julien Jacques   The discriminative functional mixture
                                  model for a comparative analysis of bike
                                  sharing systems  . . . . . . . . . . . . 1726--1760
        Jonathan R. Bradley and   
             Scott H. Holan and   
           Christopher K. Wikle   Multivariate spatio-temporal models for
                                  high-dimensional areal data with
                                  application to Longitudinal
                                  Employer--Household Dynamics . . . . . . 1761--1791
                Giacomo Zanella   Random partition models and
                                  complementary clustering of Anglo-Saxon
                                  place-names  . . . . . . . . . . . . . . 1792--1822
           Ramin Moghaddass and   
                  Cynthia Rudin   The latent state hazard model, with
                                  application to wind turbine reliability  1823--1863
            Nicholas Polson and   
                  Vadim Sokolov   Bayesian analysis of traffic flow on
                                  interstate I-55: The LWR model . . . . . 1864--1888
            Laina D. Mercer and   
              Jon Wakefield and   
            Athena Pantazis and   
        Angelina M. Lutambi and   
           Honorati Masanja and   
                   Samuel Clark   Space-time smoothing of complex survey
                                  data: Small area estimation for child
                                  mortality  . . . . . . . . . . . . . . . 1889--1905
                     Fan Li and   
          Alessandra Mattei and   
                Fabrizia Mealli   Evaluating the causal effect of
                                  university grants on student dropout:
                                  Evidence from a regression discontinuity
                                  design using principal stratification    1906--1931
             T. R. Fanshawe and   
              C. M. Chapman and   
                       T. Crick   Lymphangiogenesis and carcinoma in the
                                  uterine cervix: Joint and hierarchical
                                  models for random cluster sizes and
                                  continuous outcomes  . . . . . . . . . . 1932--1949
               Shawn Mankad and   
             George Michailidis   Analysis of multiview legislative
                                  networks with structured matrix
                                  factorization: Does Twitter influence
                                  translate to the real world? . . . . . . 1950--1972
        Lyron J. Winderbaum and   
                  Inge Koch and   
       Ove J. R. Gustafsson and   
             Stephan Meding and   
                 Peter Hoffmann   Feature extraction for proteomics
                                  imaging mass spectrometry data . . . . . 1973--1996
                Leila Wehbe and   
             Aaditya Ramdas and   
         Rebecca C. Steorts and   
          Cosma Rohilla Shalizi   Regularized brain reading with shrinkage
                                  and smoothing  . . . . . . . . . . . . . 1997--2022
               Peiman Asadi and   
         Anthony C. Davison and   
              Sebastian Engelke   Extremes on river networks . . . . . . . 2023--2050
       Milan Stehlík and   
                Philipp Hermann   Letter to the Editor . . . . . . . . . . 2051
              Shengtong Han and   
              Hongmei Zhang and   
       Gabrielle A. Lockett and   
          Nandini Mukherjee and   
           John W. Holloway and   
               Wilfried Karmaus   Identifying heterogeneous
                                  transgenerational DNA methylation sites
                                  via clustering in beta regression  . . . 2052--2072
               Renato Guseo and   
               Cinzia Mortarino   Modeling competition between two
                                  pharmaceutical drugs using innovation
                                  diffusion models . . . . . . . . . . . . 2073--2089
                  Jie Xiong and   
              D. P. Dittmer and   
                   J. S. Marron   ``Virus hunting'' using radial distance
                                  weighted discrimination  . . . . . . . . 2090--2109
                   Ying Sun and   
               Michael L. Stein   A stochastic space-time model for
                                  intermittent precipitation occurrences   2110--2132
       Lynne Steuerle Schofield   Correcting for measurement error in
                                  latent variables used as predictors  . . 2133--2152
                 Eunjee Lee and   
                 Hongtu Zhu and   
                 Dehan Kong and   
                 Yalin Wang and   
  Kelly Sullivan Giovanello and   
          Joseph G. Ibrahim and   
for the Alzheimer's Disease Neuroimaging Initiative   BFLCRM: a Bayesian functional linear Cox
                                  regression model for predicting time to
                                  conversion to Alzheimer's disease  . . . 2153--2178
          Eugen Pircalabelu and   
            Gerda Claeskens and   
               Sara Jahfari and   
             Lourens J. Waldorp   A focused information criterion for
                                  graphical models in fMRI connectivity
                                  with high-dimensional data . . . . . . . 2179--2214
         Daniel Scharfstein and   
           Andrea Rotnitzky and   
              Maria Abraham and   
            Aidan McDermott and   
           Richard Chaisson and   
                Lawrence Geiter   On the analysis of tuberculosis studies
                                  with intermittent missing sputum data    2215--2236
           Rebecca Andridge and   
       Katherine Jenny Thompson   Assessing nonresponse bias in a business
                                  survey: Proxy pattern--mixture analysis
                                  for skewed data  . . . . . . . . . . . . 2237--2265
                 Ronny Luss and   
             Saharon Rosset and   
                    Moni Shahar   Correction: Efficient regularized
                                  isotonic regression with application to
                                  gene-gene interaction search . . . . . . 2266--2267


Annals of Applied Statistics
Volume 10, Number 1, March, 2016

            Linda S. L. Tan and   
               Aik Hui Chan and   
                     Tian Zheng   Topic-adjusted visibility metric for
                                  scientific articles  . . . . . . . . . . 1--31
                  Ailin Fan and   
                  Wenbin Lu and   
                       Rui Song   Sequential advantage selection for
                                  optimal treatment regime . . . . . . . . 32--53
               Dmitry Kobak and   
            Sergey Shpilkin and   
         Maxim S. Pshenichnikov   Integer percentages as electoral
                                  falsification fingerprints . . . . . . . 54--73
          Benjamin A. Shaby and   
             Brian J. Reich and   
              Daniel Cooley and   
                Cari G. Kaufman   A Markov-switching model for heat waves  74--93
        Yannick Vandendijck and   
              Christel Faes and   
                      Niel Hens   Prevalence and trend estimation from
                                  observational data with highly variable
                                  post-stratification weights  . . . . . . 94--117
                  Yajuan Si and   
           Jerome P. Reiter and   
           D. Sunshine Hillygus   Bayesian latent pattern mixture models
                                  for handling attrition in panel studies
                                  with refreshment samples . . . . . . . . 118--143
                    Ke Deng and   
                    Yang Li and   
                Weiping Zhu and   
                     Jun S. Liu   Fast parameter estimation in loss
                                  tomography for networks of general
                                  topology . . . . . . . . . . . . . . . . 144--164
              James P. Long and   
                Eric C. Chi and   
            Richard G. Baraniuk   Estimating a common period for a set of
                                  irregularly sampled functions with
                                  applications to periodic variable star
                                  data . . . . . . . . . . . . . . . . . . 165--197
               Paul Bendich and   
               J. S. Marron and   
                Ezra Miller and   
               Alex Pieloch and   
                   Sean Skwerer   Persistent homology analysis of brain
                                  artery trees . . . . . . . . . . . . . . 198--218
             Ching-Fan Sheu and   
    Émeline Perthame and   
              Yuh-shiow Lee and   
                  David Causeur   Accounting for time dependence in
                                  large-scale multiple testing of
                                  event-related potential data . . . . . . 219--245
            Simon J. Bonner and   
       Matthew R. Schofield and   
               Patrik Noren and   
                Steven J. Price   Extending the latent multinomial model
                                  with complex error processes and dynamic
                                  Markov bases . . . . . . . . . . . . . . 246--263
                  Ruth King and   
        Brett T. McClintock and   
              Darren Kidney and   
                 David Borchers   Capture-recapture abundance estimation
                                  using a semi-complete data likelihood
                                  approach . . . . . . . . . . . . . . . . 264--285
                    Le Wang and   
             Pamela A. Shaw and   
        Hansie M. Mathelier and   
          Stephen E. Kimmel and   
                Benjamin French   Evaluating risk-prediction models using
                                  data from electronic health records  . . 286--304
            Daniel McCarthy and   
                Shane T. Jensen   Power-weighted densities for time series
                                  data . . . . . . . . . . . . . . . . . . 305--334
             Hyunseung Kang and   
              Benno Kreuels and   
            Jürgen May and   
                 Dylan S. Small   Full matching approach to instrumental
                                  variables estimation with application to
                                  the effect of malaria on stunting  . . . 335--364
                Sharad Goel and   
              Justin M. Rao and   
                    Ravi Shroff   Precinct or prejudice? Understanding
                                  racial disparities in New York City's
                                  stop-and-frisk policy  . . . . . . . . . 365--394
             Colin J. Worby and   
          Philip D. O'Neill and   
          Theodore Kypraios and   
          Julie V. Robotham and   
         Daniela De Angelis and   
    Edward J. P. Cartwright and   
          Sharon J. Peacock and   
                  Ben S. Cooper   Reconstructing transmission trees for
                                  communicable diseases using densely
                                  sampled genetic data . . . . . . . . . . 395--417
                   Ying Liu and   
               Yuanjia Wang and   
                  Yang Feng and   
                Melanie M. Wall   Variable selection and prediction with
                                  incomplete high-dimensional data . . . . 418--450
             Marissa Isidro and   
            Stephen Haslett and   
                    Geoff Jones   Extended Structure Preserving Estimation
                                  (ESPREE) for updating small area
                                  estimates of poverty . . . . . . . . . . 451--476
             Andrew Poppick and   
         David J. McInerney and   
         Elisabeth J. Moyer and   
               Michael L. Stein   Temperatures in transient climates:
                                  Improved methods for simulations with
                                  evolving temporal covariances  . . . . . 477--505
               Mengjie Chen and   
                 Haifan Lin and   
                    Hongyu Zhao   Change point analysis of histone
                                  modifications reveals epigenetic blocks
                                  linking to physical domains  . . . . . . 506--526
        Brandon George, Jr. and   
              Thomas Denney and   
             Himanshu Gupta and   
          Louis Dell'Italia and   
                Inmaculada Aban   Applying a spatiotemporal model for
                                  longitudinal cardiac imaging data  . . . 527--548

Annals of Applied Statistics
Volume 10, Number 2, June, 2016

         Anna-Kaisa Ylitalo and   
      Aila Särkkä and   
                  Peter Guttorp   What we look at in paintings: a
                                  comparison between experienced and
                                  inexperienced art viewers  . . . . . . . 549--574
           Amanda A. Koepke and   
        Ira M. Longini, Jr. and   
      M. Elizabeth Halloran and   
              Jon Wakefield and   
              Vladimir N. Minin   Predictive modeling of cholera outbreaks
                                  in Bangladesh  . . . . . . . . . . . . . 575--595
               Wanghuan Chu and   
                   Runze Li and   
               Matthew Reimherr   Feature screening for time-varying
                                  coefficient models with
                                  ultrahigh-dimensional longitudinal data  596--617
              Kwang Woo Ahn and   
                 Brent R. Logan   Pseudo-value approach for conditional
                                  quantile residual lifetime analysis for
                                  clustered survival and competing risks
                                  data with applications to bone marrow
                                  transplant data  . . . . . . . . . . . . 618--637
               Linlin Zhang and   
           Michele Guindani and   
          Francesco Versace and   
       Jeffrey M. Engelmann and   
                Marina Vannucci   A spatiotemporal nonparametric Bayesian
                                  model of multi-subject fMRI data . . . . 638--666
          Drausin F. Wulsin and   
            Shane T. Jensen and   
                     Brian Litt   Nonparametric multi-level clustering of
                                  human epilepsy seizures  . . . . . . . . 667--689
                 Sean Ruddy and   
              Marla Johnson and   
               Elizabeth Purdom   Shrinkage of dispersion parameters in
                                  the binomial family, with application to
                                  differential exon skipping . . . . . . . 690--725
             Nancy R. Zhang and   
             Benjamin Yakir and   
                  Li C. Xia and   
                 David Siegmund   Scan statistics on Poisson random fields
                                  with applications in genomics  . . . . . 726--755
                   Xiao Liu and   
               Kyongmin Yeo and   
            Youngdeok Hwang and   
             Jitendra Singh and   
              Jayant Kalagnanam   A statistical modeling approach for air
                                  quality data based on physical
                                  dispersion processes and its application
                                  to ozone modeling  . . . . . . . . . . . 756--785
          Laurent Briollais and   
               Adrian Dobra and   
                 Jinnan Liu and   
           Matt Friedlander and   
              Hilmi Ozcelik and   
         Hél\`ene Massam   A Bayesian graphical model for
                                  genome-wide association studies (GWAS)   786--811
               Paolo Zanini and   
               Haipeng Shen and   
                   Young Truong   Understanding resident mobility in Milan
                                  through independent component analysis
                                  of Telecom Italia mobile usage data  . . 812--833
                   Peng Shi and   
              Xiaoping Feng and   
          Jean-Philippe Boucher   Multilevel modeling of insurance claims
                                  using copulas  . . . . . . . . . . . . . 834--863
            Philip J. Brown and   
               Martin S. Ridout   Level-screening designs for factors with
                                  many levels  . . . . . . . . . . . . . . 864--883
               Ick Hoon Jin and   
                  Ying Yuan and   
         Dipankar Bandyopadhyay   A Bayesian hierarchical spatial model
                                  for dental caries assessment using
                                  non-Gaussian Markov random fields  . . . 884--905
              Stijn Jaspers and   
           Philippe Lambert and   
                     Marc Aerts   A Bayesian approach to the
                                  semiparametric estimation of a minimum
                                  inhibitory concentration distribution    906--924
            Maria Bolsinova and   
               Gunter Maris and   
               Herbert Hoijtink   Unmixing Rasch scales: How to score an
                                  educational test . . . . . . . . . . . . 925--945
            Belinda Phipson and   
                Stanley Lee and   
            Ian J. Majewski and   
        Warren S. Alexander and   
                Gordon K. Smyth   Robust hyperparameter estimation
                                  protects against hypervariable genes and
                                  improves power to detect differential
                                  expression . . . . . . . . . . . . . . . 946--963
               Carlo Gaetan and   
              Paolo Girardi and   
            Roberto Pastres and   
                 Antoine Mangin   Clustering Chlorophyll-a satellite data
                                  using quantiles  . . . . . . . . . . . . 964--988
                  Hui Jiang and   
           Patrick W. Saart and   
                    Yingcun Xia   Asymmetric conditional correlations in
                                  stock returns  . . . . . . . . . . . . . 989--1018
                   Pixu Shi and   
                 Anru Zhang and   
                     Hongzhe Li   Regression analysis for microbiome
                                  compositional data . . . . . . . . . . . 1019--1040
           Ephraim M. Hanks and   
            Mevin B. Hooten and   
            Steven T. Knick and   
      Sara J. Oyler-McCance and   
           Jennifer A. Fike and   
              Todd B. Cross and   
            Michael K. Schwartz   Latent spatial models and sampling
                                  design for landscape genetics  . . . . . 1041--1062
             Seunghwan Park and   
              Jae Kwang Kim and   
                    Sangun Park   An imputation approach for handling
                                  mixed-mode surveys . . . . . . . . . . . 1063--1085
                 Luke Keele and   
                Jason W. Morgan   How strong is strong enough?
                                  Strengthening instruments through
                                  matching and weak instrument tests . . . 1086--1106
         Raymond K. W. Wong and   
           Vinay L. Kashyap and   
           Thomas C. M. Lee and   
               David A. van Dyk   Detecting abrupt changes in the spectra
                                  of high-energy astrophysical sources . . 1107--1134
                Nadja Klein and   
               Thomas Kneib and   
                Stefan Lang and   
                 Alexander Sohn   Correction: Bayesian structured additive
                                  distributional regression with an
                                  application to regional income
                                  inequality in Germany  . . . . . . . . . 1135--1136
                      Anonymous   Editorial Board  . . . . . . . . . . . . ??
                      Anonymous   Table of Contents  . . . . . . . . . . . ??

Annals of Applied Statistics
Volume 10, Number 3, September, 2016

         Raymond K. W. Wong and   
           Thomas C. M. Lee and   
              Debashis Paul and   
                   Jie Peng and   
Alzheimer's Disease Neuroimaging Initiative   Fiber direction estimation, smoothing
                                  and tracking in diffusion MRI  . . . . . 1137--1156
              Armin Schwartzman   Discussion of ``Fiber direction
                                  estimation in diffusion MRI''  . . . . . 1157--1159
                Nicole A. Lazar   Discussion of ``Fiber direction
                                  estimation in diffusion MRI''  . . . . . 1160--1161
                  Jian Kang and   
                       Lexin Li   Discussion of ``Fiber direction
                                  estimation in diffusion MRI''  . . . . . 1162--1165
         Raymond K. W. Wong and   
           Thomas C. M. Lee and   
              Debashis Paul and   
                       Jie Peng   Rejoinder: ``Fiber direction estimation,
                                  smoothing and tracking in diffusion
                                  MRI''  . . . . . . . . . . . . . . . . . 1166--1169
               Bruno Arpino and   
              Alessandra Mattei   Assessing the causal effects of
                                  financial aids to firms in Tuscany
                                  allowing for interference  . . . . . . . 1170--1194
                     Han Wu and   
                         Yu Zhu   Deconvolution of base pair level RNA-Seq
                                  read counts for quantification of
                                  transcript expression levels . . . . . . 1195--1216
               Ian Johnston and   
            Timothy Hancock and   
          Hiroshi Mamitsuka and   
                  Luis Carvalho   Gene-proximity models for genome-wide
                                  association studies  . . . . . . . . . . 1217--1244
                 Avi Feller and   
               Todd Grindal and   
              Luke Miratrix and   
                Lindsay C. Page   Compared to what? Variation in the
                                  impacts of early childhood education by
                                  alternative care type  . . . . . . . . . 1245--1285
              Abhirup Datta and   
           Sudipto Banerjee and   
           Andrew O. Finley and   
        Nicholas A. S. Hamm and   
                 Martijn Schaap   Nonseparable dynamic nearest neighbor
                                  Gaussian process models for large
                                  spatio-temporal data with an application
                                  to particulate matter analysis . . . . . 1286--1316
                Mengyang Gu and   
                James O. Berger   Parallel partial Gaussian process
                                  emulation for computer models with
                                  massive output . . . . . . . . . . . . . 1317--1347
               Chandler Zuo and   
                Kailei Chen and   
             Kyle J. Hewitt and   
          Emery H. Bresnick and   
         Sündüz Keles   A hierarchical framework for state-space
                                  matrix inference and clustering  . . . . 1348--1372
         Thomas E. Bartlett and   
                  Alexey Zaikin   Detection of epigenomic network
                                  community oncomarkers  . . . . . . . . . 1373--1396
                   Fang Han and   
                Xiaoyan Han and   
                    Han Liu and   
                    Brian Caffo   Sparse median graphs estimation in a
                                  high-dimensional semiparametric model    1397--1426
                 Duncan Lee and   
                  Andrew Lawson   Quantifying the spatial inequality and
                                  temporal trends in maternal smoking
                                  rates in Glasgow . . . . . . . . . . . . 1427--1446
              Paul R. Rosenbaum   Using Scheffé projections for multiple
                                  outcomes in an observational study of
                                  smoking and periodontal disease  . . . . 1447--1471
Vanda Inácio de Carvalho and   
         Miguel de Carvalho and   
             Todd A. Alonzo and   
Wenceslao González-Manteiga   Functional covariate-adjusted partial
                                  area under the specificity-ROC curve
                                  with an application to metabolic
                                  syndrome diagnosis . . . . . . . . . . . 1472--1495
               Julyan Arbel and   
           Kerrie Mengersen and   
                Judith Rousseau   Bayesian nonparametric dependent model
                                  for partially replicated data: The
                                  influence of fuel spills on species
                                  diversity  . . . . . . . . . . . . . . . 1496--1516
                   Yang Liu and   
             James V. Zidek and   
           Andrew W. Trites and   
              Brian C. Battaile   Bayesian data fusion approaches to
                                  predicting spatial tracks: Application
                                  to marine mammals  . . . . . . . . . . . 1517--1546
            Thierry Chekouo and   
        Francesco C. Stingo and   
           Michele Guindani and   
                     Kim-Anh Do   A Bayesian predictive model for imaging
                                  genetics with application to
                                  schizophrenia  . . . . . . . . . . . . . 1547--1571
             Eleni Matechou and   
           Rachel S. McCrea and   
         Byron J. T. Morgan and   
             Darryn J. Nash and   
           Richard A. Griffiths   Open models for removal data . . . . . . 1572--1589
          Daniel W. Gladish and   
           Petra M. Kuhnert and   
         Daniel E. Pagendam and   
       Christopher K. Wikle and   
            Rebecca Bartley and   
             Ross D. Searle and   
             Robin J. Ellis and   
            Cameron Dougall and   
          Ryan D. R. Turner and   
           Stephen E. Lewis and   
     Zoë T. Bainbridge and   
                  Jon E. Brodie   Spatio-temporal assimilation of modelled
                                  catchment loads with monitoring data in
                                  the Great Barrier Reef . . . . . . . . . 1590--1618
                   Xiaoquan Wen   Molecular QTL discovery incorporating
                                  genomic annotations using Bayesian false
                                  discovery rate control . . . . . . . . . 1619--1638
                  Han Lin Shang   Mortality and life expectancy
                                  forecasting for a group of populations
                                  in developed countries: a multilevel
                                  functional data method . . . . . . . . . 1639--1672
           Brook T. Russell and   
           Daniel S. Cooley and   
          William C. Porter and   
             Brian J. Reich and   
               Colette L. Heald   Data mining to investigate the
                                  meteorological drivers for extreme
                                  ground level ozone events  . . . . . . . 1673--1698
                    Jie Liu and   
             Chunming Zhang and   
                     David Page   Multiple testing under dependence via
                                  graphical models . . . . . . . . . . . . 1699--1724
            Eric Warren Fox and   
   Frederic Paik Schoenberg and   
             Joshua Seth Gordon   Spatially inhomogeneous background rate
                                  estimators and uncertainty
                                  quantification for nonparametric Hawkes
                                  point process models of earthquake
                                  occurrences  . . . . . . . . . . . . . . 1725--1756
               Kaushik Jana and   
           Debasis Sengupta and   
                   Kalyan Rudra   Correction of bifurcated river flow
                                  measurements from historical data:
                                  Paving the way for the Teesta water
                                  sharing treaty . . . . . . . . . . . . . 1757--1775
                      Anonymous   Editorial Board  . . . . . . . . . . . . ??
                      Anonymous   Table of Contents  . . . . . . . . . . . ??

Annals of Applied Statistics
Volume 10, Number 4, December, 2016

           Bernard W. Silverman   Introduction to discussion of
                                  ``Coauthorship and citation networks for
                                  statisticians''  . . . . . . . . . . . . 1777--1778
               Pengsheng Ji and   
                    Jiashun Jin   Coauthorship and citation networks for
                                  statisticians  . . . . . . . . . . . . . 1779--1812
             Pedro Regueiro and   
      Abel Rodríguez and   
                      Juan Sosa   Discussion of ``Coauthorship and
                                  citation networks for statisticians''    1813--1819
                  Song Wang and   
                      Karl Rohe   Discussion of ``Coauthorship and
                                  citation networks for statisticians''    1820--1826
              Vishesh Karwa and   
               Sonja Petrovi\'c   Discussion of ``Coauthorship and
                                  citation networks for statisticians''    1827--1834
               Mladen Kolar and   
                     Matt Taddy   Discussion of ``Coauthorship and
                                  citation networks for statisticians''    1835--1841
            Forrest W. Crawford   Discussion of ``Coauthorship and
                                  citation networks for statisticians''    1842--1845
               Pengsheng Ji and   
                    Jiashun Jin   Rejoinder: ``Coauthorship and citation
                                  networks for statisticians'' . . . . . . 1846--1853
                 Eardi Lila and   
           John A. D. Aston and   
              Laura M. Sangalli   Smooth Principal Component Analysis over
                                  two-dimensional manifolds with an
                                  application to neuroimaging  . . . . . . 1854--1879
                   Kun Chen and   
            Eric A. Hoffman and   
           Indu Seetharaman and   
                Feiran Jiao and   
             Ching-Long Lin and   
                  Kung-Sik Chan   Linking lung airway structure to
                                  pulmonary function via composite bridge
                                  regression . . . . . . . . . . . . . . . 1880--1906
          Bailey K. Fosdick and   
              Maria DeYoreo and   
               Jerome P. Reiter   Categorical data fusion using auxiliary
                                  information  . . . . . . . . . . . . . . 1907--1929
                    Ran Shi and   
                       Ying Guo   Investigating differences in brain
                                  functional networks using hierarchical
                                  covariate-adjusted independent component
                                  analysis . . . . . . . . . . . . . . . . 1930--1957
               Zach Branson and   
        Tirthankar Dasgupta and   
                Donald B. Rubin   Improving covariate balance in $ 2^K $
                                  factorial designs via rerandomization
                                  with an application to a New York City
                                  Department of Education High School
                                  Study  . . . . . . . . . . . . . . . . . 1958--1976
               Zhengyi Zhou and   
              David S. Matteson   Predicting Melbourne ambulance demand
                                  using kernel warping . . . . . . . . . . 1977--1996
            Cinar Kilcioglu and   
     José R. Zubizarreta   Maximizing the information content of a
                                  balanced matched sample in a study of
                                  the economic performance of green
                                  buildings  . . . . . . . . . . . . . . . 1997--2020
              Ryan Admiraal and   
               Mark S. Handcock   Modeling concurrency and selective
                                  mixing in heterosexual partnership
                                  networks with applications to sexually
                                  transmitted diseases . . . . . . . . . . 2021--2046
             Yongliang Zhai and   
Alexandre Bouchard-Côté   Inferring rooted population trees using
                                  asymmetric neighbor joining  . . . . . . 2047--2074
             Hugo C. Winter and   
           Jonathan A. Tawn and   
                 Simon J. Brown   Modelling the effect of the El
                                  Niño--Southern Oscillation on extreme
                                  spatial temperature events over
                                  Australia  . . . . . . . . . . . . . . . 2075--2101
                   Chi Song and   
                 Xiaoyi Min and   
                   Heping Zhang   The screening and ranking algorithm for
                                  change-points detection in multiple
                                  samples  . . . . . . . . . . . . . . . . 2102--2129
            Tanya P. Garcia and   
             Samuel Müller   Cox regression with exclusion
                                  frequency-based weights to identify
                                  neuroimaging markers relevant to
                                  Huntington's disease onset . . . . . . . 2130--2156
           Terrance D. Savitsky   Bayesian nonparametric multiresolution
                                  estimation for the American Community
                                  Survey . . . . . . . . . . . . . . . . . 2157--2181
            Henry R. Scharf and   
            Mevin B. Hooten and   
          Bailey K. Fosdick and   
           Devin S. Johnson and   
             Josh M. London and   
                 John W. Durban   Dynamic social networks based on
                                  movement . . . . . . . . . . . . . . . . 2182--2202
            Daniele Durante and   
                David B. Dunson   Locally adaptive dynamic networks  . . . 2203--2232
            John H. Spivack and   
                      Bin Cheng   Estimating odds ratios under a
                                  case-background design with an
                                  application to a study of Sorafenib
                                  accessibility  . . . . . . . . . . . . . 2233--2253
             Naim U. Rashid and   
                    Wei Sun and   
              Joseph G. Ibrahim   A statistical model to assess
                                  (allele-specific) associations between
                                  gene expression and epigenetic features
                                  using sequencing data  . . . . . . . . . 2254--2273
                  Won Chang and   
               Murali Haran and   
          Patrick Applegate and   
                  David Pollard   Improving ice sheet model calibration
                                  using paleoclimate and modern data . . . 2274--2302
             Emeric Thibaud and   
                 Juha Aalto and   
           Daniel S. Cooley and   
         Anthony C. Davison and   
                 Juha Heikkinen   Bayesian inference for the
                                  Brown--Resnick process, with an
                                  application to extreme low temperatures  2303--2324
          Gina-Maria Pomann and   
           Ana-Maria Staicu and   
           Edgar J. Lobaton and   
            Amanda F. Mejia and   
             Blake E. Dewey and   
            Daniel S. Reich and   
       Elizabeth M. Sweeney and   
           Russell T. Shinohara   A lag functional linear model for
                                  prediction of magnetization transfer
                                  ratio in multiple sclerosis lesions  . . 2325--2348
                 Ruitao Lin and   
                   Guosheng Yin   Bootstrap aggregating continual
                                  reassessment method for dose finding in
                                  drug-combination trials  . . . . . . . . 2349--2376
           Francesco Marass and   
           Florent Mouliere and   
                    Ke Yuan and   
           Nitzan Rosenfeld and   
              Florian Markowetz   A phylogenetic latent feature model for
                                  clonal deconvolution . . . . . . . . . . 2377--2404
            Leonardo Grilli and   
             Fulvia Pennoni and   
           Carla Rampichini and   
                 Isabella Romeo   Exploiting TIMSS and PIRLS combined
                                  data: Multivariate multilevel modelling
                                  of student achievement . . . . . . . . . 2405--2426
                      Anonymous   Editorial Board  . . . . . . . . . . . . ??
                      Anonymous   Table of Contents  . . . . . . . . . . . ??


Annals of Applied Statistics
Volume 11, Number 1, March, 2017

                  Xinyao Ji and   
               Gunther Fink and   
           Paul Jacob Robyn and   
                 Dylan S. Small   Randomization inference for
                                  stepped-wedge cluster-randomized trials:
                                  an application to community-based health
                                  insurance  . . . . . . . . . . . . . . . 1--20
             Eleni Matechou and   
          François Caron   Modelling individual migration patterns
                                  using a Bayesian nonparametric approach
                                  for capture-recapture data . . . . . . . 21--40
   Gwenaël G. R. Leday and   
    Mathisca C. M. de Gunst and   
          Gino B. Kpogbezan and   
       Aad W. van der Vaart and   
    Wessel N. van Wieringen and   
            Mark A. van de Wiel   Gene network reconstruction using
                                  global-local shrinkage priors  . . . . . 41--68
          Rachel M. Messick and   
          Matthew J. Heaton and   
                    Neil Hansen   Multivariate spatial mapping of soil
                                  water holding capacity with spatially
                                  varying cross-correlations . . . . . . . 69--92
           Joshua P. Keller and   
              Mathias Drton and   
             Timothy Larson and   
            Joel D. Kaufman and   
            Dale P. Sandler and   
                 Adam A. Szpiro   Covariate-adaptive clustering of
                                  exposures for air pollution epidemiology
                                  cohorts  . . . . . . . . . . . . . . . . 93--113
                Lin S. Chen and   
               Jiebiao Wang and   
              Xianlong Wang and   
                       Pei Wang   A mixed-effects model for incomplete
                                  data from labeling-based quantitative
                                  proteomics experiments . . . . . . . . . 114--138
           Guilherme Ludwig and   
                Tingjin Chu and   
                    Jun Zhu and   
                Haonan Wang and   
                Kirsten Koehler   Static and roving sensor data fusion for
                                  spatio-temporal hazard mapping with
                                  application to occupational exposure
                                  assessment . . . . . . . . . . . . . . . 139--160
               Yuping Zhang and   
           Zhengqing Ouyang and   
                    Hongyu Zhao   A statistical framework for data
                                  integration through graphical models
                                  with application to cancer genomics  . . 161--184
               Chenkun Wang and   
                    Hai Liu and   
                     Sujuan Gao   A penalized Cox proportional hazards
                                  model with multiple time-varying
                                  exposures  . . . . . . . . . . . . . . . 185--201
                Dave Osthus and   
           Kyle S. Hickmann and   
         Petruta C. Caragea and   
                Dave Higdon and   
              Sara Y. Del Valle   Forecasting seasonal influenza with a
                                  state-space SIR model  . . . . . . . . . 202--224
         Trang Quynh Nguyen and   
           Cyrus Ebnesajjad and   
            Stephen R. Cole and   
            Elizabeth A. Stuart   Sensitivity analysis for an unobserved
                                  moderator in RCT-to-target-population
                                  generalization of treatment effects  . . 225--247
               Debbie J. Dupuis   Electricity price dependence in New York
                                  State zones: a robust detrended
                                  correlation approach . . . . . . . . . . 248--273
                  Xiao Song and   
                        Li Wang   Partially time-varying coefficient
                                  proportional hazards models with
                                  error-prone time-dependent covariates
                                  --- an application to the AIDS Clinical
                                  Trial Group 175 data . . . . . . . . . . 274--296
           Heidi J. Fischer and   
              Qunfang Zhang and   
                 Yifang Zhu and   
                Robert E. Weiss   Functional time series models for
                                  ultrafine particle distributions . . . . 297--319
       Jan van de Kassteele and   
           Jan van Eijkeren and   
                 Jacco Wallinga   Efficient estimation of age-specific
                                  social contact rates between men and
                                  women  . . . . . . . . . . . . . . . . . 320--339
            Erin M. Schliep and   
            Alan E. Gelfand and   
             James S. Clark and   
             Bradley J. Tomasek   Biomass prediction using a
                                  density-dependent diameter distribution
                                  model  . . . . . . . . . . . . . . . . . 340--361
          Stacy L. DeRuiter and   
            Roland Langrock and   
            Tomas Skirbutas and   
        Jeremy A. Goldbogen and   
          John Calambokidis and   
        Ari S. Friedlaender and   
            Brandon L. Southall   A multivariate mixed hidden Markov model
                                  for blue whale behaviour and responses
                                  to sound exposure  . . . . . . . . . . . 362--392
             Tracy Holsclaw and   
           Arthur M. Greene and   
        Andrew W. Robertson and   
                 Padhraic Smyth   Bayesian nonhomogeneous Markov models
                                  via Pólya--Gamma data augmentation with
                                  applications to rainfall modeling  . . . 393--426
         Pavel N. Krivitsky and   
                 Martina Morris   Inference for social network models from
                                  egocentrically sampled data, with
                                  application to understanding persistent
                                  racial disparities in HIV prevalence in
                                  the US . . . . . . . . . . . . . . . . . 427--455
         Chelsea L. Lofland and   
      Abel Rodríguez and   
                    Scott Moser   Assessing differences in legislators'
                                  revealed preferences: a case study on
                                  the 107th U.S. Senate  . . . . . . . . . 456--479

Annals of Applied Statistics
Volume 11, Number 2, June, 2017

         Shinichiro Shirota and   
                Alan E. Gelfand   Space and circular time log Gaussian Cox
                                  processes with application to crime
                                  event data . . . . . . . . . . . . . . . 481--503
           Sergio Venturini and   
        Jessica M. Franklin and   
              Laura Morlock and   
             Francesca Dominici   Random effects models for identifying
                                  the most harmful medication errors in a
                                  large, voluntary reporting database  . . 504--526
      Abel Rodríguez and   
                 Ziwei Wang and   
              Athanasios Kottas   Assessing systematic risk in the S&P500
                                  index between 2000 and 2011: a Bayesian
                                  nonparametric approach . . . . . . . . . 527--552
                     Lu Xin and   
                     Mu Zhu and   
                   Hugh Chipman   A continuous-time stochastic block model
                                  for basketball networks  . . . . . . . . 553--597
         Kamiar Rahnama Rad and   
         Timothy A. Machado and   
                  Liam Paninski   Robust and scalable Bayesian analysis of
                                  spatial neural tuning function data  . . 598--637
               Yingye Zheng and   
             Marshall Brown and   
                   Anna Lok and   
                     Tianxi Cai   Improving efficiency in biomarker
                                  incremental value evaluation under
                                  two-phase designs  . . . . . . . . . . . 638--654
             Madeleine Cule and   
                 Peter Donnelly   Stochastic modelling and inference in
                                  electronic hospital databases for the
                                  spread of infections:
                                  \bionameClostridium difficile
                                  transmission in Oxfordshire hospitals
                                  2007--2010 . . . . . . . . . . . . . . . 655--679
            Yves Thibaudeau and   
                  Eric Slud and   
             Alfred Gottschalck   Modeling log-linear conditional
                                  probabilities for estimation in surveys  680--697
         Cedric E. Ginestet and   
                     Jun Li and   
       Prakash Balachandran and   
           Steven Rosenberg and   
               Eric D. Kolaczyk   Hypothesis testing for network data in
                                  functional neuroimaging  . . . . . . . . 725--750
            David R. Hunter and   
                     Le Bao and   
                      Mary Poss   Assignment of endogenous retrovirus
                                  integration sites using a mixture model  751--770
                   Tao Wang and   
                    Hongyu Zhao   Structured subcomposition selection in
                                  regression and its application to
                                  microbiome data analysis . . . . . . . . 771--791
                    You Ren and   
               Emily B. Fox and   
                   Andrew Bruce   Clustering correlated, sparse data
                                  streams to estimate a localized housing
                                  price index  . . . . . . . . . . . . . . 808--839
            Sarah Friedrich and   
             Jan Beyersmann and   
          Ursula Winterfeld and   
          Martin Schumacher and   
                Arthur Allignol   Nonparametric estimation of pregnancy
                                  outcome probabilities  . . . . . . . . . 840--867
             Tingting Zhang and   
                Qiannan Yin and   
                Brian Caffo and   
                  Yinge Sun and   
             Dana Boatman-Reich   Bayesian inference of high-dimensional,
                                  cluster-structured ordinary differential
                                  equation models with applications to
                                  brain connectivity studies . . . . . . . 868--897
         Oleksandr Gromenko and   
             Piotr Kokoszka and   
                      Jan Sojka   Evaluation of the cooling trend in the
                                  ionosphere using functional regression
                                  with incomplete curves . . . . . . . . . 898--918
        Elizabeth L. Ogburn and   
           Tyler J. VanderWeele   Vaccines, contagion, and social networks 919--948
            Patrick Schnell and   
                    Qi Tang and   
          Peter Müller and   
              Bradley P. Carlin   Subgroup inference for multiple
                                  treatments and multiple endpoints in an
                                  Alzheimer's disease treatment trial  . . 949--966
               Yichen Cheng and   
               James Y. Dai and   
          Thomas G. Paulson and   
                Xiaoyu Wang and   
                Xiaohong Li and   
              Brian J. Reid and   
             Charles Kooperberg   Quantification of multiple tumor clones
                                  using gene array and sequencing data . . 967--991
                  Shuyi Liu and   
                         Wei Wu   Generalized Mahalanobis depth in point
                                  process and its application in neural
                                  coding . . . . . . . . . . . . . . . . . 992--1010
             Silvia Cagnone and   
          Simone Giannerini and   
                  Lucia Modugno   Multilevel models with stochastic
                                  volatility for repeated cross-sections:
                                  an application to tribal art prices  . . 1040--1062
                Noorie Hyun and   
               Li C. Cheung and   
                   Qing Pan and   
             Mark Schiffman and   
               Hormuzd A. Katki   Flexible risk prediction models for left
                                  or interval-censored data from
                                  electronic health records  . . . . . . . 1063--1084
            Tanya P. Garcia and   
                 Yanyuan Ma and   
               Karen Marder and   
                   Yuanjia Wang   Robust mixed effects model for clustered
                                  failure time data: Application to
                                  Huntington's disease event measures  . . 1085--1116
                   Jiti Gao and   
                   Bin Peng and   
                   Zhao Ren and   
                  Xiaohui Zhang   Variable selection for a categorical
                                  varying-coefficient model with
                                  identifications for determinants of body
                                  mass index . . . . . . . . . . . . . . . 1117--1145
              Luke J. Kelly and   
              Geoff K. Nicholls   Lateral transfer in Stochastic Dollo
                                  models . . . . . . . . . . . . . . . . . 1146--1168
                   Hao Chen and   
               Yuchao Jiang and   
            Kara N. Maxwell and   
     Katherine L. Nathanson and   
                    Nancy Zhang   Allele-specific copy number estimation
                                  by whole exome sequencing  . . . . . . . 1169--1192

Annals of Applied Statistics
Volume 11, Number 3, September, 2017

             Camelia Simoiu and   
         Sam Corbett-Davies and   
                    Sharad Goel   The problem of infra-marginality in
                                  outcome tests for discrimination . . . . 1193--1216
   Michael Salter-Townshend and   
             Tyler H. McCormick   Latent space models for multiview
                                  network data . . . . . . . . . . . . . . 1217--1244
            Leontine Alkema and   
              Sanqian Zhang and   
                 Doris Chou and   
             Alison Gemmill and   
            Ann-Beth Moller and   
               Doris Ma Fat and   
                   Lale Say and   
              Colin Mathers and   
                   Daniel Hogan   A Bayesian approach to the global
                                  estimation of maternal mortality . . . . 1245--1274
               Lo-Bin Chang and   
            Eran Borenstein and   
                  Wei Zhang and   
                   Stuart Geman   Maximum likelihood features for
                                  generative image models  . . . . . . . . 1275--1308
               Hyungsuk Tak and   
              Kaisey Mandel and   
           David A. van Dyk and   
           Vinay L. Kashyap and   
               Xiao-Li Meng and   
            Aneta Siemiginowska   Bayesian estimates of astronomical time
                                  delays between gravitationally lensed
                                  stochastic light curves  . . . . . . . . 1309--1348
                     Xu Shi and   
           Hristina Pashova and   
            Patrick J. Heagerty   Comparing healthcare utilization
                                  patterns via global differences in the
                                  endorsement of current procedural
                                  terminology codes  . . . . . . . . . . . 1349--1374
           Marcelo Hartmann and   
         Geoffrey R. Hosack and   
         Richard M. Hillary and   
                Jarno Vanhatalo   Gaussian process framework for temporal
                                  dependence and discrepancy functions in
                                  Ricker-type population growth models . . 1375--1402
             Romain Chailan and   
         Gwladys Toulemonde and   
                Jean-Noel Bacro   A semiparametric method to simulate
                                  bivariate space-time extremes  . . . . . 1403--1428
               Tso-Jung Yen and   
              Zong-Rong Lee and   
                Yi-Hau Chen and   
                 Yu-Min Yen and   
              Jing-Shiang Hwang   Estimating links of a network from time
                                  to event data  . . . . . . . . . . . . . 1429--1451
             Y. Samuel Wang and   
           Ross L. Matsueda and   
              Elena A. Erosheva   A variational EM method for mixed
                                  membership models with multivariate rank
                                  data: an analysis of public policy
                                  preferences  . . . . . . . . . . . . . . 1452--1480
                Binghui Liu and   
                   Chong Wu and   
              Xiaotong Shen and   
                        Wei Pan   A novel and efficient algorithm for de
                                  novo discovery of mutated driver
                                  pathways in cancer . . . . . . . . . . . 1481--1512
                  Bei Jiang and   
                Eva Petkova and   
            Thaddeus Tarpey and   
                  R. Todd Ogden   Latent class modeling using matrix
                                  covariates with application to
                                  identifying early placebo responders
                                  based on EEG signals . . . . . . . . . . 1513--1536
    Aurélien Nicosia and   
           Thierry Duchesne and   
          Louis-Paul Rivest and   
                  Daniel Fortin   A multi-state conditional logistic
                                  regression model for the analysis of
                                  animal movement  . . . . . . . . . . . . 1537--1560
                  Xiang Zhu and   
               Matthew Stephens   Bayesian large-scale multiple regression
                                  with summary statistics from genome-wide
                                  association studies  . . . . . . . . . . 1561--1592
         Antonello Maruotti and   
                  Jan Bulla and   
           Francesco Lagona and   
               Marco Picone and   
             Francesca Martella   Dynamic mixtures of factor analyzers to
                                  characterize multivariate air pollutant
                                  exposures  . . . . . . . . . . . . . . . 1617--1648
               Fangrong Yan and   
                   Xiao Lin and   
                   Xuelin Huang   Dynamic prediction of disease
                                  progression for leukemia patients by
                                  functional principal component analysis
                                  of longitudinal expression levels of an
                                  oncogene . . . . . . . . . . . . . . . . 1649--1670
             Mikael Kuusela and   
                Philip B. Stark   Shape-constrained uncertainty
                                  quantification in unfolding steeply
                                  falling elementary particle spectra  . . 1671--1710
         Jan-Otto Hooghoudt and   
          Margarida Barroso and   
           Rasmus Waagepetersen   Toward Bayesian inference of the spatial
                                  distribution of proteins from three-cube
                                  Förster resonance energy transfer data    1711--1737
              Xiaoying Tang and   
          Michael I. Miller and   
                 Laurent Younes   Biomarker change-point estimation with
                                  right censoring in longitudinal studies  1738--1762
              Runchao Jiang and   
                  Wenbin Lu and   
                   Rui Song and   
         Michael G. Hudgens and   
               Sonia Naprvavnik   Doubly robust estimation of optimal
                                  treatment regimes for survival data-with
                                  application to an HIV/AIDS study . . . . 1763--1786
                   Jue Wang and   
                  Sheng Luo and   
                       Liang Li   Dynamic prediction for multiple repeated
                                  measures and event time data: an
                                  application to Parkinson's disease . . . 1787--1809
                Lingxue Zhu and   
                   Jing Lei and   
              Bernie Devlin and   
                 Kathryn Roeder   Testing high-dimensional covariance
                                  matrices, with application to detecting
                                  schizophrenia risk genes . . . . . . . . 1810--1831

Annals of Applied Statistics
Volume 11, Number 4, December, 2017

              Natalia Nolde and   
              Johanna F. Ziegel   Elicitability and backtesting:
                                  Perspectives for banking regulation  . . 1833--1874
              Hajo Holzmann and   
                  Bernhard Klar   Discussion of ``Elicitability and
                                  backtesting: Perspectives for banking
                                  regulation'' . . . . . . . . . . . . . . 1875--1882
                Patrick Schmidt   Discussion of ``Elicitability and
                                  backtesting: Perspectives for banking
                                  regulation'' . . . . . . . . . . . . . . 1883--1885
               Mark H. A. Davis   Discussion of ``Elicitability and
                                  backtesting: Perspectives for banking
                                  regulation'' . . . . . . . . . . . . . . 1886--1887
                      Chen Zhou   Discussion on ``Elicitability and
                                  backtesting: Perspectives for banking
                                  regulation'' . . . . . . . . . . . . . . 1888--1893
                    Marie Kratz   Discussion of ``Elicitability and
                                  backtesting: Perspectives for banking
                                  regulation'' . . . . . . . . . . . . . . 1894--1900
              Natalia Nolde and   
              Johanna F. Ziegel   Rejoinder: ``Elicitability and
                                  backtesting: Perspectives for banking
                                  regulation'' . . . . . . . . . . . . . . 1901--1911
            Peter M. Aronow and   
                    Cyrus Samii   Estimating average causal effects under
                                  general interference, with application
                                  to a social network experiment . . . . . 1912--1947
        Nynke M. D. Niezink and   
             Tom A. B. Snijders   Co-evolution of social networks and
                                  continuous actor attributes  . . . . . . 1948--1973
         William Chad Young and   
          Adrian E. Raftery and   
                   Ka Yee Yeung   Model-based clustering with data
                                  correction for removing artifacts in
                                  gene expression data . . . . . . . . . . 1998--2026
                     Xiang Zhou   A unified framework for variance
                                  component estimation with summary
                                  statistics in genome-wide association
                                  studies  . . . . . . . . . . . . . . . . 2027--2051
              Yuanyuan Duan and   
                  Yili Hong and   
          William Q. Meeker and   
         Deborah L. Stanley and   
                    Xiaohong Gu   Photodegradation modeling based on
                                  laboratory accelerated test data and
                                  predictions under outdoor weathering for
                                  polymeric materials  . . . . . . . . . . 2052--2079
                Michael Fop and   
             Keith M. Smart and   
          Thomas Brendan Murphy   Variable selection for latent class
                                  analysis with application to low back
                                  pain diagnosis . . . . . . . . . . . . . 2080--2110
        Isabelle S. Beaudry and   
             Krista J. Gile and   
                Shruti H. Mehta   Inference for respondent-driven sampling
                                  with misclassification . . . . . . . . . 2111--2141
          Ricardo Pio Monti and   
Christoforos Anagnostopoulos and   
               Giovanni Montana   Learning population and subject-specific
                                  brain connectivity networks via mixed
                                  neighborhood selection . . . . . . . . . 2142--2164
             Harrison Quick and   
            Lance A. Waller and   
                 Michele Casper   Multivariate spatiotemporal modeling of
                                  age-specific stroke mortality  . . . . . 2165--2177
                 E. Cantoni and   
          J. Mills Flemming and   
                    A. H. Welsh   A random-effects hurdle model for
                                  predicting bycatch of endangered marine
                                  species  . . . . . . . . . . . . . . . . 2178--2199
                   Zhou Fan and   
                  Lester Mackey   Empirical Bayesian analysis of
                                  simultaneous changepoints in multiple
                                  data sequences . . . . . . . . . . . . . 2200--2221
            Linda S. L. Tan and   
                 Ajay Jasra and   
             Maria De Iorio and   
           Timothy M. D. Ebbels   Bayesian inference for multiple Gaussian
                                  graphical models with application to
                                  metabolic association networks . . . . . 2222--2251
           Rong W. Zablocki and   
          Richard A. Levine and   
           Andrew J. Schork and   
                 Shujing Xu and   
               Yunpeng Wang and   
                Chun C. Fan and   
             Wesley K. Thompson   Semiparametric covariate-modulated local
                                  false discovery rate for genome-wide
                                  association studies  . . . . . . . . . . 2252--2269
                  Yuan Yuan and   
            Fabian E. Bachl and   
              Finn Lindgren and   
          David L. Borchers and   
           Janine B. Illian and   
        Stephen T. Buckland and   
           Håvard Rue and   
                 Tim Gerrodette   Point process models for spatio-temporal
                                  distance sampling data from a
                                  large-scale survey of blue whales  . . . 2270--2297
           Deepayan Chakrabarti   Modeling node incentives in directed
                                  networks . . . . . . . . . . . . . . . . 2298--2331
                  Eric Hare and   
              Heike Hofmann and   
              Alicia Carriquiry   Automatic matching of bullet land
                                  impressions  . . . . . . . . . . . . . . 2332--2356
             Colin S. Gillespie   Estimating the number of casualties in
                                  the American Indian War: a Bayesian
                                  analysis using the power law
                                  distribution . . . . . . . . . . . . . . 2357--2374
                  Ross Towe and   
                Emma Eastoe and   
              Jonathan Tawn and   
                Philip Jonathan   Statistical downscaling for future
                                  extreme wave heights in the North Sea    2375--2403
              Hajo Holzmann and   
                  Bernhard Klar   Focusing on regions of interest in
                                  forecast evaluation  . . . . . . . . . . 2404--2431


Annals of Applied Statistics
Volume 12, Number 1, March, 2018

                Yunfan Tang and   
                      Li Ma and   
                 Dan L. Nicolae   A phylogenetic scan test on a
                                  Dirichlet-tree multinomial model for
                                  microbiome data  . . . . . . . . . . . . 1--26
            Leah R. Johnson and   
          Robert B. Gramacy and   
               Jeremy Cohen and   
              Erin Mordecai and   
           Courtney Murdock and   
                 Jason Rohr and   
              Sadie J. Ryan and   
     Anna M. Stewart-Ibarra and   
                  Daniel Weikel   Phenomenological forecasting of disease
                                  incidence using heteroskedastic Gaussian
                                  processes: a dengue case study . . . . . 27--66
           Ben C. Augustine and   
            J. Andrew Royle and   
          Marcella J. Kelly and   
      Christopher B. Satter and   
           Robert S. Alonso and   
           Erin E. Boydston and   
                Kevin R. Crooks   Spatial capture--recapture with partial
                                  identity: An application to camera traps 67--95
               Paul B. Conn and   
              Ray T. Alisauskas   Simultaneous modelling of movement,
                                  measurement error, and observer
                                  dependence in mark-recapture distance
                                  sampling: an application to Arctic bird
                                  surveys  . . . . . . . . . . . . . . . . 96--122
            David N. Reshef and   
            Yakir A. Reshef and   
           Pardis C. Sabeti and   
           Michael Mitzenmacher   An empirical study of the maximal and
                                  total information coefficients and
                                  leading measures of dependence . . . . . 123--155
             Christian Fong and   
               Chad Hazlett and   
                    Kosuke Imai   Covariate balancing propensity score for
                                  a continuous treatment: Application to
                                  the efficacy of political advertisements 156--177
          Christopher Pardy and   
            Sally Galbraith and   
                Susan R. Wilson   Integrative exploration of large
                                  high-dimensional datasets  . . . . . . . 178--199
                 Hong Zhang and   
        Nilanjan Chatterjee and   
               Daniel Rader and   
                     Jinbo Chen   Adjustment of nonconfounding covariates
                                  in case-control genetic association
                                  studies  . . . . . . . . . . . . . . . . 200--221
       Brianna C. Heggeseth and   
             Nicholas P. Jewell   How Gaussian mixture models might miss
                                  detecting factors that impact growth
                                  patterns . . . . . . . . . . . . . . . . 222--245
         Christian Rohrbeck and   
             Emma F. Eastoe and   
           Arnoldo Frigessi and   
               Jonathan A. Tawn   Extreme value modelling of water-related
                                  insurance claims . . . . . . . . . . . . 246--282
      Daniela Castro-Camilo and   
         Miguel de Carvalho and   
             Jennifer Wadsworth   Time-varying extreme value dependence
                                  with application to leading European
                                  stock markets  . . . . . . . . . . . . . 283--309
                Brian Bader and   
                    Jun Yan and   
                   Xuebin Zhang   Automated threshold selection for
                                  extreme value analysis via ordered
                                  goodness-of-fit tests with adjustment
                                  for false discovery rate . . . . . . . . 310--329
            Natalie E. Dean and   
      M. Elizabeth Halloran and   
                 Ira M. Longini   Design of vaccine trials during
                                  outbreaks with and without a delayed
                                  vaccination comparator . . . . . . . . . 330--347
                     Xin Li and   
            Alex Belianinov and   
                Ondrej Dyck and   
              Stephen Jesse and   
                    Chiwoo Park   Two-level structural sparsity
                                  regularization for identifying lattices
                                  and defects in noisy images  . . . . . . 348--377
                   Xiao Liu and   
          Vikneswaran Gopal and   
              Jayant Kalagnanam   A spatio-temporal modeling framework for
                                  weather radar image data in tropical
                                  Southeast Asia . . . . . . . . . . . . . 378--407
               James Livsey and   
                Robert Lund and   
         Stefanos Kechagias and   
                 Vladas Pipiras   Multivariate integer-valued time series
                                  with flexible autocovariances and their
                                  application to major hurricane counts    408--431
               Julie Bessac and   
        Emil Constantinescu and   
                 Mihai Anitescu   Stochastic simulation of predictive
                                  space-time scenarios of wind speed using
                                  observations and physical model outputs  432--458
                 Minjie Fan and   
              Debashis Paul and   
           Thomas C. M. Lee and   
                  Tomoko Matsuo   A multi-resolution model for
                                  non-Gaussian random fields on a sphere
                                  with application to ionospheric
                                  electrostatic potentials . . . . . . . . 459--489
              Jaehong Jeong and   
         Stefano Castruccio and   
               Paola Crippa and   
                 Marc G. Genton   Reducing storage of global wind
                                  ensembles with stochastic generators . . 490--509
              Wei Vivian Li and   
                  Anqi Zhao and   
               Shihua Zhang and   
              Jingyi Jessica Li   MSIQ: Joint modeling of multiple RNA-seq
                                  samples for accurate isoform
                                  quantification . . . . . . . . . . . . . 510--539
        Timothy W. Randolph and   
                   Sen Zhao and   
              Wade Copeland and   
            Meredith Hullar and   
                    Ali Shojaie   Kernel-penalized regression for analysis
                                  of microbiome data . . . . . . . . . . . 540--566
                  Yaowu Liu and   
                        Jun Xie   Powerful test based on conditional
                                  effects for genome-wide screening  . . . 567--585
                 Kevin Caye and   
                  Flora Jay and   
             Olivier Michel and   
        Olivier François   Fast inference of individual admixture
                                  coefficients using geographic data . . . 586--608
                Lingxue Zhu and   
                   Jing Lei and   
              Bernie Devlin and   
                 Kathryn Roeder   A unified statistical framework for
                                  single cell and bulk RNA sequencing data 609--632
          Nicholas J. Clark and   
                Philip M. Dixon   Modeling and estimation for
                                  self-exciting spatio-temporal models of
                                  terrorist activity . . . . . . . . . . . 633--653
    Katherine R. McLaughlin and   
               Joshua D. EmBree   Empirical assessment of programs to
                                  promote collaboration: a network model
                                  approach . . . . . . . . . . . . . . . . 654--682

Annals of Applied Statistics
Volume 12, Number 2, June, 2018

                Donald B. Rubin   On Stephen E. Fienberg as a discussant
                                  and a friend . . . . . . . . . . . . . . 683--684
                   Xiao-Li Meng   Statistical paradises and paradoxes in
                                  big data (I): Law of large populations,
                                  big data paradox, and the 2016 US
                                  presidential election  . . . . . . . . . 685--726
     Sivaraman Balakrishnan and   
                Larry Wasserman   Hypothesis testing for high-dimensional
                                  multinomials: A selective review . . . . 727--749
            D. A. S. Fraser and   
                    N. Reid and   
                        Wei Lin   When should modes of inference disagree?
                                  Some simple but challenging examples . . 750--770
               Joseph B. Kadane   Fingerprint science  . . . . . . . . . . 771--787
            Karen D. H. Pan and   
                  Karen Kafadar   Statistical modeling and analysis of
                                  trace element concentrations in forensic
                                  glass evidence . . . . . . . . . . . . . 788--814
               Adrian Dobra and   
                 Reza Mohammadi   Loglinear model selection and human
                                  mobility . . . . . . . . . . . . . . . . 815--845
               Yen-Chi Chen and   
             Y. Samuel Wang and   
              Elena A. Erosheva   On the use of bootstrap with variational
                                  inference: Theory, interpretation, and a
                                  two-sample test example  . . . . . . . . 846--876
               Joshua Snoke and   
           Timothy R. Brick and   
     Aleksandra Slavkovi\'c and   
              Michael D. Hunter   Providing accurate models across private
                                  partitioned data: Secure maximum
                                  likelihood estimation  . . . . . . . . . 877--914
               Yuchen Zheng and   
                Nicoleta Serban   Clustering the prevalence of pediatric
                                  chronic conditions in the United States
                                  using distributed computing  . . . . . . 915--939
          Jonathan J. Azose and   
              Adrian E. Raftery   Estimating large correlation matrices
                                  for international migration  . . . . . . 940--970
              Claire Donnat and   
                   Susan Holmes   Tracking network dynamics: a survey
                                  using graph distances  . . . . . . . . . 971--1012
               Mauricio Sadinle   Bayesian propagation of record linkage
                                  uncertainty into population size
                                  estimation of human rights violations    1013--1038
                 Beidi Chen and   
      Anshumali Shrivastava and   
             Rebecca C. Steorts   Unique entity estimation with
                                  application to the Syrian conflict . . . 1039--1067
             Giuseppe Vinci and   
     Valérie Ventura and   
           Matthew A. Smith and   
                 Robert E. Kass   Adjusted regularization in latent
                                  graphical models: Application to
                                  multiple-neuron spike count data . . . . 1068--1095
                Yilin Zhang and   
          Marie Poux-Berthe and   
                Chris Wells and   
     Karolina Koc-Michalska and   
                      Karl Rohe   Discovering political topics in Facebook
                                  discussion threads with graph
                                  contextualization  . . . . . . . . . . . 1096--1123
Andrés F. Barrientos and   
           Alexander Bolton and   
                 Tom Balmat and   
           Jerome P. Reiter and   
      John M. de Figueiredo and   
     Ashwin Machanavajjhala and   
                   Yan Chen and   
            Charley Kneifel and   
                    Mark DeLong   Providing access to confidential
                                  research data through synthesis and
                                  verification: an application to data on
                                  employees of the U.S. federal government 1124--1156
        Stephen E. Fienberg and   
                Judith M. Tanur   The interlocking world of surveys and
                                  experiments  . . . . . . . . . . . . . . 1157--1179
               Kelly Bodwin and   
                  Kai Zhang and   
                   Andrew Nobel   A testing based approach to the
                                  discovery of differentially correlated
                                  variable sets  . . . . . . . . . . . . . 1180--1203
                 Zheyu Wang and   
                  Xiao-Hua Zhou   Biomarker assessment and combination
                                  with differential covariate effects and
                                  an unknown gold standard, with an
                                  application to Alzheimer's disease . . . 1204--1227
                    Zhe Zhu and   
                  Roy E. Welsch   Robust dependence modeling for
                                  high-dimensional covariance matrices
                                  with financial applications  . . . . . . 1228--1249
                 Mengyun Wu and   
                 Liping Zhu and   
                  Xingdong Feng   Network-based feature screening with
                                  applications to genome data  . . . . . . 1250--1270
               Yei Eun Shin and   
                    Yu Ding and   
               Jianhua Z. Huang   Covariate matching methods for testing
                                  and quantifying wind turbine upgrades    1271--1292
             Kshitij Sharma and   
Valérie Chavez-Demoulin and   
             Pierre Dillenbourg   Nonstationary modelling of tail
                                  dependence of two subjects'
                                  concentration  . . . . . . . . . . . . . 1293--1311
           James C. Russell and   
           Ephraim M. Hanks and   
               Murali Haran and   
                   David Hughes   A spatially varying stochastic
                                  differential equation model for animal
                                  movement . . . . . . . . . . . . . . . . 1312--1331
           Benjamin Eltzner and   
          Stephan Huckemann and   
                Kanti V. Mardia   Torus principal component analysis with
                                  applications to RNA structure  . . . . . 1332--1359
                      Anonymous   Special section in memory of Stephen E.
                                  Fienberg (1942--2016) AOAS
                                  Editor-in-Chief 2013--2015 . . . . . . . iii--x

Annals of Applied Statistics
Volume 12, Number 3, September, 2018

        Alexander M. Franks and   
          Florian Markowetz and   
             Edoardo M. Airoldi   Refining cellular pathway models using
                                  an ensemble of heterogeneous data
                                  sources  . . . . . . . . . . . . . . . . 1361--1384
                Adam Duncan and   
               Eric Klassen and   
                Anuj Srivastava   Statistical shape analysis of simplified
                                  neuronal trees . . . . . . . . . . . . . 1385--1421
        Michelle F. Miranda and   
                 Hongtu Zhu and   
              Joseph G. Ibrahim   TPRM: Tensor partition regression models
                                  with applications in imaging biomarker
                                  detection  . . . . . . . . . . . . . . . 1422--1450
           Daniel W. Adrian and   
              Ranjan Maitra and   
                 Daniel B. Rowe   Complex-valued time series modeling for
                                  improved activation detection in fMRI
                                  studies  . . . . . . . . . . . . . . . . 1451--1478
         Samuel D. Pimentel and   
            Lindsay C. Page and   
             Matthew Lenard and   
                     Luke Keele   Optimal multilevel matching using
                                  network flows: An application to a
                                  summer reading intervention  . . . . . . 1479--1505
                  Yuan Wang and   
             Hernando Ombao and   
                   Moo K. Chung   Topological data analysis of
                                  single-trial electroencephalographic
                                  signals  . . . . . . . . . . . . . . . . 1506--1534
                Yen-Tsung Huang   Joint significance tests for mediation
                                  effects of socioeconomic adversity on
                                  adiposity via epigenetics  . . . . . . . 1535--1557
                 Xiaowei Wu and   
                  Ting Guan and   
             Dajiang J. Liu and   
 Luis G. León Novelo and   
         Dipankar Bandyopadhyay   Adaptive-weight burden test for
                                  associations between quantitative traits
                                  and genotype data with complex
                                  correlations . . . . . . . . . . . . . . 1558--1582
            Sebastian Weber and   
              Andrew Gelman and   
                 Daniel Lee and   
         Michael Betancourt and   
                Aki Vehtari and   
                Amy Racine-Poon   Bayesian aggregation of average data: an
                                  application in drug development  . . . . 1583--1604
              Fangzheng Xie and   
              Mingyuan Zhou and   
                      Yanxun Xu   BayCount: a Bayesian decomposition
                                  method for inferring tumor heterogeneity
                                  using RNA-Seq counts . . . . . . . . . . 1605--1627
          Samuel W. K. Wong and   
                 Jun S. Liu and   
                      S. C. Kou   Exploring the conformational space for
                                  protein folding with sequential Monte
                                  Carlo  . . . . . . . . . . . . . . . . . 1628--1654
Mar Rodríguez-Girondo and   
                Perttu Salo and   
         Tomasz Burzykowski and   
              Markus Perola and   
Jeanine Houwing-Duistermaat and   
                   Bart Mertens   Sequential double cross-validation for
                                  assessment of added predictive ability
                                  in high-dimensional omic applications    1655--1678
       Alessandro Chiarucci and   
        Rosa Maria Di Biase and   
          Lorenzo Fattorini and   
         Marzia Marcheselli and   
                Caterina Pisani   Joining the incompatible: Exploiting
                                  purposive lists for the sample-based
                                  estimation of species richness . . . . . 1679--1699
                     Gen Li and   
                Irina Gaynanova   A general framework for association
                                  analysis of heterogeneous data . . . . . 1700--1726
                  Ying Ding and   
              Ying Grace Li and   
                  Yushi Liu and   
          Stephen J. Ruberg and   
                   Jason C. Hsu   Confident inference for SNP effects on
                                  treatment efficacy . . . . . . . . . . . 1727--1748
                Xiangyu Luo and   
                   Yingying Wei   Nonparametric Bayesian learning of
                                  heterogeneous dynamic transcription
                                  factor networks  . . . . . . . . . . . . 1749--1772
              Jane M. Lange and   
               Roman Gulati and   
          Amy S. Leonardson and   
              Daniel W. Lin and   
            Lisa F. Newcomb and   
             Bruce J. Trock and   
       H. Ballentine Carter and   
           Peter R. Carroll and   
      Matthew R. Cooperberg and   
             Janet E. Cowan and   
          Lawrence H. Klotz and   
                   Ruth Etzioni   Estimating and comparing cancer
                                  progression risks under varying
                                  surveillance protocols . . . . . . . . . 1773--1795
Sylvia Frühwirth-Schnatter and   
             Stefan Pittner and   
               Andrea Weber and   
            Rudolf Winter-Ebmer   Analysing plant closure effects using
                                  time-varying mixture-of-experts Markov
                                  chain clustering . . . . . . . . . . . . 1796--1830
              Zhichao Jiang and   
                      Peng Ding   Using missing types to improve partial
                                  identification with application to a
                                  study of HIV prevalence in Malawi  . . . 1831--1852
              Yicheng Cheng and   
               Murat Dundar and   
                  George Mohler   A coupled ETAS-I$^2$ GMM point process
                                  with applications to seismic fault
                                  detection  . . . . . . . . . . . . . . . 1853--1870
               Denis Agniel and   
                    Wen Xie and   
                Myron Essex and   
                     Tianxi Cai   Functional principal variance component
                                  testing for a genetic association study
                                  of HIV progression . . . . . . . . . . . 1871--1893
      Anders Ellern Bilgrau and   
Rasmus Froberg Bròndum and   
        Poul Svante Eriksen and   
         Karen Dybkær and   
          Martin Bògsted   Estimating a common covariance matrix
                                  for network meta-analysis of gene
                                  expression datasets in diffuse large
                                  B-cell lymphoma  . . . . . . . . . . . . 1894--1913
                  Yebin Tao and   
                    Lu Wang and   
                Daniel Almirall   Tree-based reinforcement learning for
                                  estimating optimal dynamic treatment
                                  regimes  . . . . . . . . . . . . . . . . 1914--1938
              Shirin Golchi and   
               Richard Lockhart   A frequency-calibrated Bayesian search
                                  for new particles  . . . . . . . . . . . 1939--1968
            Ray S. W. Chung and   
           Amanda M. Y. Chu and   
                  Mike K. P. So   Bayesian randomized response technique
                                  with multiple sensitive attributes: The
                                  case of information systems resource
                                  misuse . . . . . . . . . . . . . . . . . 1969--1992
             Lam Si Tung Ho and   
        Forrest W. Crawford and   
                Marc A. Suchard   Direct likelihood-based inference for
                                  discretely observed stochastic
                                  compartmental models of infectious
                                  disease  . . . . . . . . . . . . . . . . 1993--2021

Annals of Applied Statistics
Volume 12, Number 4, December, 2018

              Serge Guillas and   
               Andria Sarri and   
               Simon J. Day and   
                 Xiaoyu Liu and   
                  Frederic Dias   Functional emulation of high resolution
                                  tsunami modelling over Cascadia  . . . . 2023--2053
          Antonio R. Linero and   
        Jonathan R. Bradley and   
                   Apurva Desai   Multi-rubric models for ordinal spatial
                                  data with application to online ratings
                                  data . . . . . . . . . . . . . . . . . . 2054--2074
        Jonathon J. O'Brien and   
      Harsha P. Gunawardena and   
              Joao A. Paulo and   
                  Xian Chen and   
          Joseph G. Ibrahim and   
             Steven P. Gygi and   
               Bahjat F. Qaqish   The effects of nonignorable missing data
                                  on label-free mass spectrometry
                                  proteomics experiments . . . . . . . . . 2075--2095
            Youngdeok Hwang and   
                  Siyuan Lu and   
                  Jae-Kwang Kim   Bottom-up estimation and top-down
                                  prediction: Solar energy prediction
                                  combining information from multiple
                                  sources  . . . . . . . . . . . . . . . . 2096--2120
                  Peng Ding and   
                     Luke Keele   Rank tests in unmatched clustered
                                  randomized trials applied to a study of
                                  teacher training . . . . . . . . . . . . 2151--2174
                  Feng Chen and   
                   Wai Hong Tan   Marked self-exciting point process
                                  modelling of information diffusion on
                                  Twitter  . . . . . . . . . . . . . . . . 2175--2196
                    Meng Li and   
              Armin Schwartzman   Standardization of multivariate Gaussian
                                  mixture models and background adjustment
                                  of PET images in brain oncology  . . . . 2197--2227
Marko Järvenpää and   
         Michael U. Gutmann and   
                Aki Vehtari and   
                Pekka Marttinen   Gaussian process modelling in
                                  approximate Bayesian computation to
                                  estimate horizontal gene transfer in
                                  bacteria . . . . . . . . . . . . . . . . 2228--2251
          Maryclare Griffin and   
             Krista J. Gile and   
Karen I. Fredricksen-Goldsen and   
           Mark S. Handcock and   
              Elena A. Erosheva   A simulation-based framework for
                                  assessing the feasibility of
                                  respondent-driven sampling for
                                  estimating characteristics in
                                  populations of lesbian, gay and bisexual
                                  older adults . . . . . . . . . . . . . . 2252--2278
               Shawn Mankad and   
                 Shengli Hu and   
              Anandasivam Gopal   Single stage prediction with embedded
                                  topic modeling of online reviews for
                                  mobile app management  . . . . . . . . . 2279--2311
              Paul R. Rosenbaum   Sensitivity analysis for stratified
                                  comparisons in an observational study of
                                  the effect of smoking on homocysteine
                                  levels . . . . . . . . . . . . . . . . . 2312--2334
                Baqun Zhang and   
                      Min Zhang   Variable selection for estimating the
                                  optimal treatment regimes in the
                                  presence of a large number of covariates 2335--2358
               Heping Zhang and   
                Dungang Liu and   
                 Jiwei Zhao and   
                        Xuan Bi   Modeling hybrid traits for comorbidity
                                  and genetic studies of alcohol and
                                  nicotine co-dependence . . . . . . . . . 2359--2378
               Malte Nalenz and   
                Mattias Villani   Tree ensembles with rule structured
                                  horseshoe regularization . . . . . . . . 2379--2408
             Arman Sabbaghi and   
                    Qiang Huang   Model transfer across additive
                                  manufacturing processes via mean effect
                                  equivalence of lurking variables . . . . 2409--2429
            Ashley Petersen and   
                 Noah Simon and   
                 Daniela Witten   SCALPEL: Extracting neurons from calcium
                                  imaging data . . . . . . . . . . . . . . 2430--2456
           Michael J. Lopez and   
        Gregory J. Matthews and   
             Benjamin S. Baumer   How often does the best team win? A
                                  unified approach to understanding
                                  randomness in North American sport . . . 2483--2516
               Eric Schmitt and   
           Christopher Tull and   
                Patrick Atwater   Extending Bayesian structural
                                  time-series estimates of causal impact
                                  to many-household conservation
                                  initiatives  . . . . . . . . . . . . . . 2517--2539
                     Duncan Lee   A locally adaptive process-convolution
                                  model for estimating the health impact
                                  of air pollution . . . . . . . . . . . . 2540--2558
            Roberto Casarin and   
             Claudia Foroni and   
    Massimiliano Marcellino and   
            Francesco Ravazzolo   Uncertainty through the lenses of a
                                  mixed-frequency Bayesian panel
                                  Markov-switching model . . . . . . . . . 2559--2586
                  Miao Yuan and   
            Cheng Yong Tang and   
                  Yili Hong and   
                      Jian Yang   Disentangling and assessing
                                  uncertainties in multiperiod corporate
                                  default risk predictions . . . . . . . . 2587--2617
                     Ba Chu and   
                  Kim Huynh and   
  David Jacho-Chávez and   
               Oleksiy Kryvtsov   On the evolution of the United Kingdom
                                  price distributions  . . . . . . . . . . 2618--2646
            Ashkan Ertefaie and   
                 Anh Nguyen and   
           David J. Harding and   
        Jeffrey D. Morenoff and   
                       Wei Yang   Instrumental variable analysis with
                                  censored data in the presence of many
                                  weak instruments: Application to the
                                  effect of being sentenced to prison on
                                  time to employment . . . . . . . . . . . 2647--2673
             Julien Chiquet and   
       Mahendra Mariadassou and   
          Stéphane Robin   Variational inference for probabilistic
                                  Poisson PCA  . . . . . . . . . . . . . . 2674--2698
                Amit Sharma and   
             Jake M. Hofman and   
                Duncan J. Watts   Split-door criterion: Identification of
                                  causal effects through auxiliary
                                  outcomes . . . . . . . . . . . . . . . . 2699--2733


Annals of Applied Statistics
Volume 13, Number 1, March, 2019

           Eugene Katsevich and   
                 Chiara Sabatti   Multilayer knockoff filter: Controlled
                                  variable selection at multiple
                                  resolutions  . . . . . . . . . . . . . . 1--33
           Debbie J. Dupuis and   
                    Luca Trapin   Ground-level ozone: Evidence of
                                  increasing serial dependence in the
                                  extremes . . . . . . . . . . . . . . . . 34--59
                Yen-Tsung Huang   Genome-wide analyses of sparse mediation
                                  effects under composite null hypotheses  60--84
                    Lu Wang and   
              Zhengwu Zhang and   
                   David Dunson   Common and individual structure of brain
                                  networks . . . . . . . . . . . . . . . . 85--112
                    Lu Tian and   
                     Yi Liu and   
             Andrew Z. Fire and   
              Scott D. Boyd and   
              Richard A. Olshen   Clonality: Point estimation  . . . . . . 113--131
                  Tianxi Li and   
           Elizaveta Levina and   
                         Ji Zhu   Prediction models for network-linked
                                  data . . . . . . . . . . . . . . . . . . 132--164
             Mark D. Risser and   
        Catherine A. Calder and   
       Veronica J. Berrocal and   
                Candace Berrett   Nonstationary spatial prediction of soil
                                  organic carbon: Implications for stock
                                  assessment decision making . . . . . . . 165--188
          James E. Johndrow and   
                   Kristian Lum   An algorithm for removing sensitive
                                  information: Application to
                                  race-independent recidivism prediction   189--220
                  Juhee Lee and   
             Peter F. Thall and   
                  Steven H. Lin   Bayesian semiparametric joint regression
                                  analysis of recurrent adverse events and
                                  survival in esophageal cancer patients   221--247
     Micol Marchetti-Bowick and   
                Yaoliang Yu and   
                     Wei Wu and   
                   Eric P. Xing   A penalized regression model for the
                                  joint estimation of eQTL associations
                                  and gene network structure . . . . . . . 248--270
             Deborah Kunkel and   
               Kevin Potter and   
         Peter F. Craigmile and   
             Mario Peruggia and   
               Trisha Van Zandt   A Bayesian race model for response times
                                  under cyclic stimulus discriminability   271--296
               Jonggyu Baek and   
                    Bin Zhu and   
               Peter X. K. Song   Bayesian analysis of infant's growth
                                  dynamics with in utero exposure to
                                  environmental toxicants  . . . . . . . . 297--320
                Xiaoyue Niu and   
                  Peter D. Hoff   Joint mean and covariance modeling of
                                  multiple health outcome measures . . . . 321--339
               Zhiguang Huo and   
                   Chi Song and   
                   George Tseng   Bayesian latent hierarchical model for
                                  transcriptomic meta-analysis to detect
                                  biomarkers with clustered meta-patterns
                                  of differential expression signals . . . 340--366
               Fiona Steele and   
             Paul S. Clarke and   
                     Jouni Kuha   Modeling within-household associations
                                  in household panel studies . . . . . . . 367--392
         Alexander Petersen and   
                 Sean Deoni and   
         Hans-Georg Müller   Fréchet estimation of time-varying
                                  covariance matrices from sparse data,
                                  with application to the regional
                                  co-evolution of myelination in the
                                  developing brain . . . . . . . . . . . . 393--419
              Adam C. Sales and   
                   John F. Pane   The role of mastery learning in an
                                  intelligent tutoring system: Principal
                                  stratification on a latent variable  . . 420--443
            Farhad Shokoohi and   
              Abbas Khalili and   
           Masoud Asgharian and   
                      Shili Lin   Capturing heterogeneity of covariate
                                  effects in hidden subpopulations in the
                                  presence of censoring and large number
                                  of covariates  . . . . . . . . . . . . . 444--465
                Chenyang Gu and   
                    Roee Gutman   Development of a common patient
                                  assessment scale across the continuum of
                                  care: a nested multiple imputation
                                  approach . . . . . . . . . . . . . . . . 466--491
             Marta Crispino and   
                 Elja Arjas and   
            Valeria Vitelli and   
            Natasha Barrett and   
               Arnoldo Frigessi   A Bayesian Mallows approach to
                                  nontransitive pair comparison data: How
                                  human are sounds?  . . . . . . . . . . . 492--519
                    Xiao Wu and   
             Danielle Braun and   
Marianthi-Anna Kioumourtzoglou and   
          Christine Choirat and   
                    Qian Di and   
             Francesca Dominici   Causal inference in the context of an
                                  error prone exposure: Air pollution and
                                  mortality  . . . . . . . . . . . . . . . 520--547
              Moritz Berger and   
             Michael Wagner and   
                Matthias Schmid   Modeling biomarker ratios with gamma
                                  distributed components . . . . . . . . . 548--572
                Chris Glynn and   
                   Emily B. Fox   Dynamics of homelessness in urban
                                  America  . . . . . . . . . . . . . . . . 573--605
                    Yang Li and   
              Shaoyang Ning and   
             Sarah E. Calvo and   
            Vamsi K. Mootha and   
                     Jun S. Liu   Bayesian hidden Markov tree models for
                                  clustering genes with shared
                                  evolutionary history . . . . . . . . . . 606--637
            Michael B. Sohn and   
                     Hongzhe Li   Compositional mediation analysis for
                                  microbiome studies . . . . . . . . . . . 661--681

Annals of Applied Statistics
Volume 13, Number 2, June, 2019

         Michael Bertolacci and   
              Edward Cripps and   
                  Ori Rosen and   
                John W. Lau and   
                   Sally Cripps   Climate inference on daily rainfall
                                  across the Australian continent,
                                  1876-2015  . . . . . . . . . . . . . . . 683--712
            Daniel Dinsdale and   
        Matias Salibian-Barrera   Modelling ocean temperatures from
                                  bio-probes under preferential sampling   713--745
             Yen-Ning Huang and   
             Brian J. Reich and   
         Montserrat Fuentes and   
          A. Sankarasubramanian   Complete spatial model calibration . . . 746--766
           Colin B. Fogarty and   
             Raiden B. Hasegawa   Extended sensitivity analysis for
                                  heterogeneous unmeasured confounding
                                  with an application to sibling studies
                                  of returns to education  . . . . . . . . 767--796
      Gianluca Mastrantonio and   
      Giovanna Jona Lasinio and   
            Alessio Pollice and   
           Giulia Capotorti and   
           Lorenzo Teodonio and   
              Giulio Genova and   
                    Carlo Blasi   A hierarchical multivariate
                                  spatio-temporal model for clustered
                                  climate data with annual cycles  . . . . 797--823
            Jared D. Huling and   
                Menggang Yu and   
                  Maureen Smith   Fused comparative intervention scoring
                                  for heterogeneity of longitudinal
                                  intervention effects . . . . . . . . . . 824--847
             Andrew McDavid and   
           Raphael Gottardo and   
                 Noah Simon and   
                  Mathias Drton   Graphical models for zero-inflated
                                  single cell gene expression  . . . . . . 848--873
              Tianjian Zhou and   
          Subhajit Sengupta and   
          Peter Müller and   
                        Yuan Ji   TreeClone: Reconstruction of tumor
                                  subclone phylogeny based on mutation
                                  pairs using next generation sequencing
                                  data . . . . . . . . . . . . . . . . . . 874--899
            Silvia D'Angelo and   
      Thomas Brendan Murphy and   
                   Marco Alf\`o   Latent space modelling of
                                  multidimensional networks with
                                  application to the exchange of votes in
                                  Eurovision song contest  . . . . . . . . 900--930
               Adrian Dobra and   
              Camilo Valdes and   
              Dragana Ajdic and   
            Bertrand Clarke and   
                Jennifer Clarke   Modeling association in microbial
                                  communities with clique loglinear models 931--957
             Lorin Crawford and   
            Seth R. Flaxman and   
           Daniel E. Runcie and   
                      Mike West   Variable prioritization in nonlinear
                                  black box methods: a genetic association
                                  case study . . . . . . . . . . . . . . . 958--989
       Carolina Euán and   
                   Ying Sun and   
                 Hernando Ombao   Coherence-based time series clustering
                                  for statistical inference and
                                  visualization of brain connectivity  . . 990--1015
               Seyoung Park and   
                    Hongyu Zhao   Sparse principal component analysis with
                                  missing observations . . . . . . . . . . 1016--1042
                 Julia Fukuyama   Adaptive gPCA: a method for structured
                                  dimensionality reduction with
                                  applications to microbiome data  . . . . 1043--1067
               Soyoung Park and   
              Alicia Carriquiry   Learning algorithms to evaluate forensic
                                  glass evidence . . . . . . . . . . . . . 1068--1102
               Miaoyan Wang and   
           Jonathan Fischer and   
                    Yun S. Song   Three-way clustering of multi-tissue
                                  multi-individual gene expression data
                                  using semi-nonnegative tensor
                                  decomposition  . . . . . . . . . . . . . 1103--1127
                  Dominik Liebl   Nonparametric testing for differences in
                                  electricity prices: The case of the
                                  Fukushima nuclear accident . . . . . . . 1128--1146
           Kevin M. Donovan and   
         Michael G. Hudgens and   
               Peter B. Gilbert   Nonparametric inference for immune
                                  response thresholds of risk in vaccine
                                  studies  . . . . . . . . . . . . . . . . 1147--1165
     Maria Francesca Marino and   
     Maria Giovanna Ranalli and   
             Nicola Salvati and   
                   Marco Alf\`o   Semiparametric empirical best prediction
                                  for small area estimation of
                                  unemployment indicators  . . . . . . . . 1166--1197
       Dankmar Böhning and   
    Peter G. M. van der Heijden   The identity of the zero-truncated,
                                  one-inflated likelihood and the
                                  zero-one-truncated likelihood for
                                  general count densities with an
                                  application to drink-driving in Britain  1198--1211
                    Li Zeng and   
           Joshua L. Warren and   
                    Hongyu Zhao   Phylogeny-based tumor subclone
                                  identification using a Bayesian feature
                                  allocation model . . . . . . . . . . . . 1212--1241
          Rachel C. Nethery and   
            Fabrizia Mealli and   
             Francesca Dominici   Estimating population average causal
                                  effects in the presence of non-overlap:
                                  The effect of natural gas compressor
                                  station exposure on cancer mortality . . 1242--1267
                  Jean Feng and   
              David A. Shaw and   
          Vladimir N. Minin and   
                 Noah Simon and   
         Frederick A. Matsen IV   Survival analysis of DNA mutation motifs
                                  with penalized proportional hazards  . . 1268--1294
                    Fei Gao and   
               Yuanjia Wang and   
                   Donglin Zeng   Early diagnosis of neurological disease
                                  using peak degeneration ages of multiple
                                  biomarkers . . . . . . . . . . . . . . . 1295--1318
            Karen D. H. Pan and   
                  Karen Kafadar   Correction to: Statistical modeling and
                                  analysis of trace element concentrations
                                  in forensic glass evidence . . . . . . . 1319--1328

Annals of Applied Statistics
Volume 13, Number 3, September, 2019

           Tilman M. Davies and   
       Matthew R. Schofield and   
               Jon Cornwall and   
               Philip W. Sheard   Modelling multilevel spatial behaviour
                                  in binary-mark muscle fibre
                                  configurations . . . . . . . . . . . . . 1329--1347
                Lo-Hua Yuan and   
                 Avi Feller and   
               Luke W. Miratrix   Identifying and estimating principal
                                  causal effects in a multi-site trial of
                                  Early College High Schools . . . . . . . 1348--1369
                    Lin Liu and   
                   Yuqi Qiu and   
             Loki Natarajan and   
                   Karen Messer   Imputation and post-selection inference
                                  in models with missing data: an
                                  application to colorectal cancer
                                  surveillance guidelines  . . . . . . . . 1370--1396
                Lekha Patel and   
            Nils Gustafsson and   
                     Yu Lin and   
               Raimund Ober and   
          Ricardo Henriques and   
                   Edward Cohen   A hidden Markov model approach to
                                  characterizing the photo-switching
                                  behavior of fluorophores . . . . . . . . 1397--1429
             Jeng-Min Chiou and   
               Yu-Ting Chen and   
                   Tailen Hsing   Identifying multiple changes for a
                                  functional data sequence with
                                  application to freeway traffic
                                  segmentation . . . . . . . . . . . . . . 1430--1463
      Johann Gagnon-Bartsch and   
                 Yotam Shem-Tov   The classification permutation test: a
                                  flexible approach to testing for
                                  covariate imbalance in observational
                                  studies  . . . . . . . . . . . . . . . . 1464--1483
           Ahmed Aziz Ezzat and   
               Mikyoung Jun and   
                        Yu Ding   Spatio-temporal short-term wind
                                  forecast: a calibrated regime-switching
                                  method . . . . . . . . . . . . . . . . . 1484--1510
          Y. X. Rachel Wang and   
          Purnamrita Sarkar and   
                  Oana Ursu and   
             Anshul Kundaje and   
                Peter J. Bickel   Network modelling of topological domains
                                  using Hi-C data  . . . . . . . . . . . . 1511--1536
                Yanjun Qian and   
           Jianhua Z. Huang and   
                Chiwoo Park and   
                        Yu Ding   Fast dynamic nonparametric distribution
                                  tracking in electron microscopic data    1537--1563
             Lisa Schlosser and   
            Torsten Hothorn and   
              Reto Stauffer and   
                  Achim Zeileis   Distributional regression forests for
                                  probabilistic precipitation forecasting
                                  in complex terrain . . . . . . . . . . . 1564--1589
                  Ying Chen and   
               J. S. Marron and   
                   Jiejie Zhang   Modeling seasonality and serial
                                  dependence of electricity price curves
                                  with warping functional autoregressive
                                  dynamics . . . . . . . . . . . . . . . . 1590--1616
               Gaoxiang Jia and   
                Xinlei Wang and   
                   Qiwei Li and   
                     Wei Lu and   
                Ximing Tang and   
            Ignacio Wistuba and   
                       Yang Xie   RCRnorm: an integrated system of
                                  random-coefficient hierarchical
                                  regression models for normalizing
                                  NanoString nCounter data . . . . . . . . 1617--1647
Jesús D. Arroyo Relión and   
             Daniel Kessler and   
           Elizaveta Levina and   
              Stephan F. Taylor   Network classification with applications
                                  to brain connectomics  . . . . . . . . . 1648--1677
             Seong-Hwan Jun and   
          Samuel W. K. Wong and   
             James V. Zidek and   
Alexandre Bouchard-Côté   Sequential decision model for inference
                                  and prediction on nonuniform hypergraphs
                                  with application to knot matching from
                                  computational forestry . . . . . . . . . 1678--1707
                   Qiwei Li and   
                Xinlei Wang and   
               Faming Liang and   
                  Guanghua Xiao   A Bayesian mark interaction model for
                                  analysis of tumor pathology images . . . 1708--1732
                   Yiyi Liu and   
           Joshua L. Warren and   
                    Hongyu Zhao   A hierarchical Bayesian model for
                                  single-cell clustering using
                                  RNA-sequencing data  . . . . . . . . . . 1733--1752
                 Huiping Xu and   
                Xiaochun Li and   
               Changyu Shen and   
                 Siu L. Hui and   
                  Shaun Grannis   Incorporating conditional dependence in
                                  latent class models for probabilistic
                                  record linkage: Does it matter?  . . . . 1753--1790
              Arkaprava Roy and   
           Subhashis Ghosal and   
           Jeffrey Prescott and   
         Kingshuk Roy Choudhury   Bayesian modeling of the structural
                                  connectome for studying Alzheimer's
                                  disease  . . . . . . . . . . . . . . . . 1791--1816
      Jessica K. Hargreaves and   
           Marina I. Knight and   
           Jon W. Pitchford and   
       Rachael J. Oakenfull and   
            Sangeeta Chawla and   
                 Jack Munns and   
                  Seth J. Davis   Wavelet spectral testing: Application to
                                  nonstationary circadian rhythms  . . . . 1817--1846
            Byron C. Jaeger and   
              D. Leann Long and   
             Dustin M. Long and   
                 Mario Sims and   
         Jeff M. Szychowski and   
                 Yuan-I Min and   
          Leslie A. Mcclure and   
              George Howard and   
                     Noah Simon   Oblique random survival forests  . . . . 1847--1883
             Jeffrey Regier and   
           Andrew C. Miller and   
             David Schlegel and   
              Ryan P. Adams and   
           Jon D. McAuliffe and   
                        Prabhat   Approximate inference for constructing
                                  astronomical catalogs from images  . . . 1884--1926
                Chanmin Kim and   
         Michael J. Daniels and   
            Joseph W. Hogan and   
          Christine Choirat and   
               Corwin M. Zigler   Bayesian methods for multiple mediators:
                                  Relating principal stratification and
                                  causal mediation in the analysis of
                                  power plant emission controls  . . . . . 1927--1956
                Youyi Zhang and   
          Jeffrey S. Morris and   
       Shivali Narang Aerry and   
           Arvind U. K. Rao and   
Veerabhadran Baladandayuthapani   Radio-iBAG: Radiomics-based integrative
                                  Bayesian analysis of multiplatform
                                  genomic data . . . . . . . . . . . . . . 1957--1988
                Bret Zeldow and   
          Vincent Lo Re III and   
                      Jason Roy   A semiparametric modeling approach using
                                  Bayesian Additive Regression Trees with
                                  an application to evaluate heterogeneous
                                  treatment effects  . . . . . . . . . . . 1989--2010

Annals of Applied Statistics
Volume 13, Number 4, December, 2019

                   Ye Zhang and   
                Zhigang Yao and   
      Patrik Forssén and   
               Torgny Fornstedt   Estimating the rate constant from
                                  biosensor data via an adaptive
                                  variational Bayesian approach  . . . . . 2011--2042
         Hannah Worthington and   
              Rachel McCrea and   
                  Ruth King and   
              Richard Griffiths   Estimating abundance from multiple
                                  sampling capture-recapture data via a
                                  multi-state multi-period stopover model  2043--2064
    Gabriela V. Cohen Freue and   
           David Kepplinger and   
Matías Salibián-Barrera and   
               Ezequiel Smucler   Robust elastic net estimators for
                                  variable selection and identification of
                                  proteomic biomarkers . . . . . . . . . . 2065--2090
                   Jason Xu and   
              Samson Koelle and   
              Peter Guttorp and   
               Chuanfeng Wu and   
             Cynthia Dunbar and   
          Janis L. Abkowitz and   
              Vladimir N. Minin   Statistical inference for partially
                                  observed branching processes with
                                  application to cell lineage tracking of
                                  in vivo hematopoiesis  . . . . . . . . . 2091--2119
     Jose Ameijeiras-Alonso and   
                Akli Benali and   
          Rosa M. Crujeiras and   
Alberto Rodríguez-Casal and   
      José M. C. Pereira   Fire seasonality identification with
                                  multimodality tests  . . . . . . . . . . 2120--2139
              Hongbin Zhang and   
                        Lang Wu   Joint model of accelerated failure time
                                  and mechanistic nonlinear model for
                                  censored covariates, with application in
                                  HIV/AIDS . . . . . . . . . . . . . . . . 2140--2157
                 Emily Berg and   
                   Danhyang Lee   Prediction of small area quantiles for
                                  the conservation effects assessment
                                  project using a mixed effects quantile
                                  regression model . . . . . . . . . . . . 2158--2188
          Carolyn M. Rutter and   
              Jonathan Ozik and   
              Maria DeYoreo and   
              Nicholson Collier   Microsimulation model calibration using
                                  incremental mixture approximate Bayesian
                                  computation  . . . . . . . . . . . . . . 2189--2212
              Ian L. Dryden and   
              Kwang-Rae Kim and   
        Charles A. Laughton and   
                     Huiling Le   Principal nested shape space analysis of
                                  molecular dynamics data  . . . . . . . . 2213--2234
           Cecilia Balocchi and   
                Shane T. Jensen   Spatial modeling of trends in crime over
                                  time in Philadelphia . . . . . . . . . . 2235--2259
             Ningshan Zhang and   
               Kyle Schmaus and   
               Patrick O. Perry   Fitting a deeply nested hierarchical
                                  model to a large book review dataset
                                  using a moment-based estimator . . . . . 2260--2288
       Federico Castelletti and   
                 Guido Consonni   Objective Bayes model selection of
                                  Gaussian interventional essential graphs
                                  for the identification of signaling
                                  pathways . . . . . . . . . . . . . . . . 2289--2311
               Stephen Berg and   
                    Jun Zhu and   
          Murray K. Clayton and   
             Monika E. Shea and   
             David J. Mladenoff   A latent discrete Markov random field
                                  approach to identifying and classifying
                                  historical forest communities based on
                                  spatial multivariate tree species counts 2312--2340
          Susheela P. Singh and   
           Ana-Maria Staicu and   
             Robert R. Dunn and   
                Noah Fierer and   
                 Brian J. Reich   A nonparametric spatial test to identify
                                  factors that shape a microbiome  . . . . 2341--2362
             John R. Tipton and   
            Mevin B. Hooten and   
               Connor Nolan and   
            Robert K. Booth and   
                Jason McLachlan   Predicting paleoclimate from
                                  compositional data using multivariate
                                  Gaussian process inverse prediction  . . 2363--2388
                     Fan Li and   
                         Fan Li   Propensity score weighting for causal
                                  inference with multiple treatments . . . 2389--2415
          Dale L. Zimmerman and   
                   Jun Tang and   
                      Rui Huang   Outline analyses of the called strike
                                  zone in Major League Baseball  . . . . . 2416--2451
                      Kun Liang   Empirical Bayes analysis of RNA
                                  sequencing experiments with auxiliary
                                  information  . . . . . . . . . . . . . . 2452--2482
      Gianluca Mastrantonio and   
              Clara Grazian and   
            Sara Mancinelli and   
                 Enrico Bibbona   New formulation of the logistic-Gaussian
                                  process to analyze trajectory tracking
                                  data . . . . . . . . . . . . . . . . . . 2483--2508
          Armin Schwartzman and   
           Andrew J. Schork and   
              Rong Zablocki and   
             Wesley K. Thompson   A simple, consistent estimator of SNP
                                  heritability from genome-wide
                                  association studies  . . . . . . . . . . 2509--2538
            Liberty Vittert and   
           Adrian W. Bowman and   
               Stanislav Katina   A hierarchical curve-based approach to
                                  the analysis of manifold data  . . . . . 2539--2563
               Seth Flaxman and   
            Michael Chirico and   
                Pau Pereira and   
               Charles Loeffler   Scalable high-resolution forecasting of
                                  sparse spatiotemporal events with kernel
                                  methods: a winning solution to the NIJ
                                  ``Real-Time Crime Forecasting
                                  Challenge''  . . . . . . . . . . . . . . 2564--2585
             Silvia Metelli and   
                 Nicholas Heard   On Bayesian new edge prediction and
                                  anomaly detection in computer networks   2586--2610
                     Li Zhu and   
               Zhiguang Huo and   
                Tianzhou Ma and   
         Steffi Oesterreich and   
                George C. Tseng   Bayesian indicator variable selection to
                                  incorporate hierarchical overlapping
                                  group structure in multi-omics
                                  applications . . . . . . . . . . . . . . 2611--2636
          Elizabeth Lorenzi and   
              Ricardo Henao and   
               Katherine Heller   Hierarchical infinite factor models for
                                  improving the prediction of surgical
                                  complications for geriatric patients . . 2637--2661
                 Joe Watson and   
             James V. Zidek and   
                 Gavin Shaddick   A general theory for preferential
                                  sampling in environmental networks . . . 2662--2700


Annals of Applied Statistics
Volume 14, Number 1, March, 2020

       Francisco J. R. Ruiz and   
                Susan Athey and   
                  David M. Blei   SHOPPER: a probabilistic model of
                                  consumer choice with substitutes and
                                  complements  . . . . . . . . . . . . . . 1--27
       Jennifer E. Starling and   
            Jared S. Murray and   
         Carlos M. Carvalho and   
          Radek K. Bukowski and   
                 James G. Scott   BART with targeted smoothing: an
                                  analysis of patient-specific stillbirth
                                  risk . . . . . . . . . . . . . . . . . . 28--50
                Wenjie Wang and   
            Robert Aseltine and   
                   Kun Chen and   
                        Jun Yan   Integrative survival analysis with
                                  uncertain event times in application to
                                  a suicide risk study . . . . . . . . . . 51--73
            Paul J. Birrell and   
            Lorenz Wernisch and   
            Brian D. M. Tom and   
              Leonhard Held and   
          Gareth O. Roberts and   
          Richard G. Pebody and   
             Daniela De Angelis   Efficient real-time monitoring of an
                                  emerging influenza pandemic: How
                                  feasible?  . . . . . . . . . . . . . . . 74--93
            Bryan D. Martin and   
             Daniela Witten and   
                  Amy D. Willis   Modeling microbial abundances and
                                  dysbiosis with beta-binomial regression  94--115
          Arnab Chakraborty and   
      Soumendra Nath Lahiri and   
                  Alyson Wilson   A statistical analysis of noisy
                                  crowdsourced weather data  . . . . . . . 116--142
                Zhenguo Gao and   
                    Pang Du and   
                    Ran Jin and   
              John L. Robertson   Surface temperature monitoring in liver
                                  procurement via functional variance
                                  change-point analysis  . . . . . . . . . 143--159
              Chih-Yuan Hsu and   
                Yi-Hau Chen and   
               Ruoh-Rong Yu and   
                 Tsung-Wei Hung   Assessing wage status transition and
                                  stagnation using quantile transition
                                  regression . . . . . . . . . . . . . . . 160--177
                 Hong Zhang and   
                Tiejun Tong and   
               John Landers and   
                     Zheyang Wu   TFisher: a powerful truncation and
                                  weighting procedure for combining
                                  $p$-values . . . . . . . . . . . . . . . 178--201
            Kerstin Spitzer and   
            Marta Pelizzola and   
               Andreas Futschik   Modifying the Chi-square and the CMH
                                  test for population genetic inference:
                                  Adapting to overdispersion . . . . . . . 202--220
            Mohamad Elmasri and   
         Maxwell J. Farrell and   
         T. Jonathan Davies and   
              David A. Stephens   A hierarchical Bayesian model for
                                  predicting ecological interactions using
                                  scaled evolutionary relationships  . . . 221--240
          Tsuyoshi Kunihama and   
          Zehang Richard Li and   
            Samuel J. Clark and   
             Tyler H. McCormick   Bayesian factor models for probabilistic
                                  cause of death assessment with verbal
                                  autopsies  . . . . . . . . . . . . . . . 241--256
           Joseph Antonelli and   
          Maitreyi Mazumdar and   
            David Bellinger and   
           David Christiani and   
              Robert Wright and   
                    Brent Coull   Estimating the health effects of
                                  environmental mixtures using Bayesian
                                  semiparametric regression and sparsity
                                  inducing priors  . . . . . . . . . . . . 257--275
               Wanghuan Chu and   
                   Runze Li and   
               Jingyuan Liu and   
               Matthew Reimherr   Feature selection for generalized
                                  varying coefficient mixed-effect models
                                  with application to obesity GWAS . . . . 276--298
            Jared D. Fisher and   
          Davide Pettenuzzo and   
             Carlos M. Carvalho   Optimal asset allocation with
                                  multivariate Bayesian dynamic linear
                                  models . . . . . . . . . . . . . . . . . 299--338
               Medha Uppala and   
               Mark S. Handcock   Modeling wildfire ignition origins in
                                  southern California using linear network
                                  point processes  . . . . . . . . . . . . 339--356
                   Peng Shi and   
                    Zifeng Zhao   Regression for copula-linked compound
                                  distributions with applications in
                                  modeling aggregate insurance claims  . . 357--380
                 Yicheng Li and   
              Adrian E. Raftery   Estimating and forecasting the
                                  smoking-attributable mortality fraction
                                  for both genders jointly in over 60
                                  countries  . . . . . . . . . . . . . . . 381--408
               Yen-Chi Chen and   
                   Adrian Dobra   Measuring human activity spaces from GPS
                                  data with density ranking and summary
                                  curves . . . . . . . . . . . . . . . . . 409--432
               Zhonghua Liu and   
                Ian Barnett and   
                     Xihong Lin   A comparison of principal component
                                  methods between multiple phenotype
                                  regression and multiple SNP regression
                                  in genetic association studies . . . . . 433--451
           Michael E. Sobel and   
            Martin A. Lindquist   Estimating causal effects in studies of
                                  human brain function: New models,
                                  methods and estimands  . . . . . . . . . 452--472
                 Alex Diana and   
             Eleni Matechou and   
                Jim Griffin and   
                Alison Johnston   A hierarchical dependent Dirichlet
                                  process prior for modelling bird
                                  migration patterns in the UK . . . . . . 473--493
                   Boyu Ren and   
           Sergio Bacallado and   
             Stefano Favaro and   
              Tommi Vatanen and   
         Curtis Huttenhower and   
                 Lorenzo Trippa   Bayesian mixed effects models for
                                  zero-inflated compositions in microbiome
                                  data analysis  . . . . . . . . . . . . . 494--517
         Trang Quynh Nguyen and   
            Elizabeth A. Stuart   Correction: Sensitivity analysis for an
                                  unobserved moderator in
                                  RCT-to-target-population generalization
                                  of treatment effects . . . . . . . . . . 518--520

Annals of Applied Statistics
Volume 14, Number 2, June, 2020

                  Yusha Liu and   
                    Meng Li and   
              Jeffrey S. Morris   Function-on-scalar quantile regression
                                  with application to mass spectrometry
                                  proteomics data  . . . . . . . . . . . . 521--541
         Geir-Arne Fuglstad and   
             Stefano Castruccio   Compression of climate simulations with
                                  a nonstationary global SpatioTemporal
                                  SPDE model . . . . . . . . . . . . . . . 542--559
                 Hong Zhang and   
          Bhramar Mukherjee and   
            Victoria Arthur and   
                    Gang Hu and   
              Hagit Hochner and   
                     Jinbo Chen   An efficient and computationally robust
                                  statistical method for analyzing
                                  case-control mother-offspring pair
                                  genetic association studies  . . . . . . 560--584
         Halley L. Brantley and   
            Joseph Guinness and   
                    Eric C. Chi   Baseline drift estimation for air
                                  quality data using quantile trend
                                  filtering  . . . . . . . . . . . . . . . 585--604
             Ben Seiyon Lee and   
               Murali Haran and   
           Robert W. Fuller and   
              David Pollard and   
                   Klaus Keller   A fast particle-based approach for
                                  calibrating a $3$-D model of the
                                  Antarctic ice sheet  . . . . . . . . . . 605--634
              Natalie Klein and   
             Josue Orellana and   
           Scott L. Brincat and   
             Earl K. Miller and   
                 Robert E. Kass   Torus graphs for multivariate phase
                                  coupling analysis  . . . . . . . . . . . 635--660
             Walter Dempsey and   
                  Peng Liao and   
              Santosh Kumar and   
                Susan A. Murphy   The stratified micro-randomized trial
                                  design: Sample size considerations for
                                  testing nested causal effects of
                                  time-varying treatments  . . . . . . . . 661--684
                 Peiran Liu and   
              Adrian E. Raftery   Accounting for uncertainty about past
                                  values in probabilistic projections of
                                  the total fertility rate for most
                                  countries  . . . . . . . . . . . . . . . 685--705
              Chris Skinner and   
                   Fiona Steele   Estimation of dyadic characteristics of
                                  family networks using sample survey data 706--726
           Lorenzo Cappello and   
              Julia A. Palacios   Sequential importance sampling for
                                  multiresolution Kingman--Tajima
                                  coalescent counting  . . . . . . . . . . 727--751
  Antoine Godichon-Baggioni and   
     Cathy Maugis-Rabusseau and   
                     Andrea Rau   Multiview cluster aggregation and
                                  splitting, with an application to
                                  multiomic breast cancer data . . . . . . 752--767
                Dongyan Yan and   
              Subharup Guha and   
                   Chul Ahn and   
                     Ram Tiwari   Semiparametric Bayesian Markov analysis
                                  of personalized benefit-risk assessment  768--788
             Chris McKennan and   
                Carole Ober and   
                    Dan Nicolae   Estimation and inference in metabolomics
                                  with nonrandom missing data and latent
                                  factors  . . . . . . . . . . . . . . . . 789--808
          Amir Nikooienejad and   
                 Wenyi Wang and   
               Valen E. Johnson   Bayesian variable selection for survival
                                  data using inverse moment priors . . . . 809--828
            Bikram Karmakar and   
           Chyke A. Doubeni and   
                 Dylan S. Small   Evidence factors in a case-control study
                                  with application to the effect of
                                  flexible sigmoidoscopy screening on
                                  colorectal cancer  . . . . . . . . . . . 829--849
      Georgia Papadogeorgou and   
             Francesca Dominici   A causal exposure response function with
                                  local adjustment for confounding:
                                  Estimating health effects of exposure to
                                  low levels of ambient fine particulate
                                  matter . . . . . . . . . . . . . . . . . 850--871
        Céline Cunen and   
         Lars Wallòe and   
                 Nils Lid Hjort   Focused model selection for linear mixed
                                  models with an application to whale
                                  ecology  . . . . . . . . . . . . . . . . 872--904
   Hél\`ene Ruffieux and   
         Anthony C. Davison and   
            Jörg Hager and   
               Jamie Inshaw and   
        Benjamin P. Fairfax and   
          Sylvia Richardson and   
               Leonardo Bottolo   A global-local approach for detecting
                                  hotspots in multiple-response regression 905--928
              Qianqian Shan and   
                  Yili Hong and   
              William Q. Meeker   Seasonal warranty prediction based on
                                  recurrent event data . . . . . . . . . . 929--955
                     Bo Wei and   
               Zhumin Zhang and   
            HuiChuan J. Lai and   
                     Limin Peng   Generalized accelerated recurrence time
                                  model in the presence of a dependent
                                  terminal event . . . . . . . . . . . . . 956--976
                  Shuo Zhou and   
             Howard Bondell and   
     Antoinette Tordesillas and   
  Benjamin I. P. Rubinstein and   
                   James Bailey   Early identification of an impending
                                  rockslide location via a spatially-aided
                                  Gaussian mixture model . . . . . . . . . 977--992
             Subhadeep Paul and   
                     Yuguo Chen   A random effects stochastic block model
                                  for joint community detection in
                                  multiple networks with applications to
                                  neuroimaging . . . . . . . . . . . . . . 993--1029
               Yingye Zheng and   
          Douglas A. Corley and   
              Chyke Doubeni and   
                 Ethan Halm and   
         Susan M. Shortreed and   
          William E. Barlow and   
                 Ann Zauber and   
         Tor Devin Tosteson and   
                 Jessica Chubak   Analyses of preventive care measures
                                  with incomplete historical data in
                                  electronic medical records: an example
                                  from colorectal cancer screening . . . . 1030--1044
            Mark J. Giganti and   
             Pamela A. Shaw and   
               Guanhua Chen and   
            Sally S. Bebawy and   
            Megan M. Turner and   
        Timothy R. Sterling and   
              Bryan E. Shepherd   Accounting for dependent errors in
                                  predictors and time-to-event outcomes
                                  using electronic health records,
                                  validation samples and multiple
                                  imputation . . . . . . . . . . . . . . . 1045--1061

Annals of Applied Statistics
Volume 14, Number 3, September, 2020

               Kenneth Hung and   
                William Fithian   Statistical methods for replicability
                                  assessment . . . . . . . . . . . . . . . 1063--1087
               Jingjing Zou and   
           David J. Lederer and   
              Daniel Rabinowitz   Efficiency in lung transplant allocation
                                  strategies . . . . . . . . . . . . . . . 1088--1121
           Nathan Sandholtz and   
                     Luke Bornn   Markov decision processes with dynamic
                                  transition probabilities: an analysis of
                                  shooting strategies in basketball  . . . 1122--1145
                 Chao Cheng and   
                     Molin Wang   Statistical methods for analysis of
                                  combined categorical biomarker data from
                                  multiple studies . . . . . . . . . . . . 1146--1163
         Jonathan Stallrich and   
            Md Nazmul Islam and   
           Ana-Maria Staicu and   
              Dustin Crouch and   
                  Lizhi Pan and   
                       He Huang   Optimal EMG placement for a robotic
                                  prosthesis controller with sequential,
                                  adaptive functional estimation (SAFE)    1164--1181
              Chelsea Zhang and   
             Sean J. Taylor and   
               Curtiss Cobb and   
                 Jasjeet Sekhon   Active matrix factorization for surveys  1182--1206
              Abhirup Datta and   
                Andrew Pita and   
                 Amrita Rao and   
             Bhekie Sithole and   
              Zandile Mnisi and   
                   Stefan Baral   Size estimation of key populations in
                                  the HIV epidemic in eSwatini using
                                  incomplete and misaligned
                                  capture-recapture data . . . . . . . . . 1207--1241
              Seok-Oh Jeong and   
              Dongseok Choi and   
                  Woncheol Jang   A semiparametric mixture method for
                                  local false discovery rate estimation
                                  from multiple studies  . . . . . . . . . 1242--1257
               Idris Eckley and   
              Claudia Kirch and   
                    Silke Weber   A novel change-point approach for the
                                  detection of gas emission sources using
                                  remotely contained concentration data    1258--1284
     Erik Scharwächter and   
           Emmanuel Müller   Does terrorism trigger online hate
                                  speech? On the association of events and
                                  time series  . . . . . . . . . . . . . . 1285--1303
                Hohyun Jung and   
                Jae-Gil Lee and   
                 Namgil Lee and   
                    Sung-Ho Kim   PTEM: a popularity-based topical
                                  expertise model for community question
                                  answering  . . . . . . . . . . . . . . . 1304--1325
                      Zi Ye and   
               Giles Hooker and   
              Stephen P. Ellner   The Jensen effect and functional single
                                  index models: Estimating the ecological
                                  implications of nonlinear reaction norms 1326--1341
             Anna Kiriliouk and   
                Philippe Naveau   Climate extreme event attribution using
                                  multivariate peaks-over-thresholds
                                  modeling and counterfactual theory . . . 1342--1358
               Amanda Lenzi and   
                 Marc G. Genton   Spatiotemporal probabilistic wind vector
                                  forecasting over Saudi Arabia  . . . . . 1359--1378
                Zhigang Yao and   
                Zengyan Fan and   
           Masahito Hayashi and   
                William F. Eddy   Quantifying time-varying sources in
                                  magnetoencephalography --- a discrete
                                  approach . . . . . . . . . . . . . . . . 1379--1408
                 Imke Mayer and   
              Erik Sverdrup and   
               Tobias Gauss and   
           Jean-Denis Moyer and   
               Stefan Wager and   
                    Julie Josse   Doubly robust treatment effect
                                  estimation with missing attributes . . . 1409--1431
           Brian G. Barkley and   
         Michael G. Hudgens and   
            John D. Clemens and   
               Mohammad Ali and   
                Michael E. Emch   Causal inference from observational
                                  studies with clustered interference,
                                  with application to a cholera vaccine
                                  study  . . . . . . . . . . . . . . . . . 1432--1448
            Neil A. Spencer and   
                Jared S. Murray   A Bayesian hierarchical model for
                                  evaluating forensic footwear evidence    1449--1470
       Matthew D. Koslovsky and   
          Kristi L. Hoffman and   
           Carrie R. Daniel and   
                Marina Vannucci   A Bayesian model of microbiome data for
                                  simultaneous identification of covariate
                                  associations and prediction of
                                  phenotypic outcomes  . . . . . . . . . . 1471--1492
                 Xiaofei Xu and   
                  Ying Chen and   
           Cathy W. S. Chen and   
                  Xiancheng Lin   Adaptive log-linear zero-inflated
                                  generalized Poisson autoregressive model
                                  with applications to crime counts  . . . 1493--1515
           Saverio Ranciati and   
         Veronica Vinciotti and   
                   Ernst C. Wit   Identifying overlapping terrorist cells
                                  from the Noordin Top actor-event network 1516--1534
                    Zhe Sun and   
                   Wanli Xu and   
               Xiaomei Cong and   
                     Gen Li and   
                       Kun Chen   Log-contrast regression with functional
                                  compositional predictors: Linking
                                  preterm infants' gut microbiome
                                  trajectories to neurobehavioral outcome  1535--1556
         Philip S. Boonstra and   
                 John C. Krauss   Inferring a consensus problem list using
                                  penalized multistage models for ordered
                                  data . . . . . . . . . . . . . . . . . . 1557--1580

Annals of Applied Statistics
Volume 14, Number 4, December, 2020

          Anna K. Yanchenko and   
                  Peter D. Hoff   Hierarchical multidimensional scaling
                                  for the comparison of musical
                                  performance styles . . . . . . . . . . . 1581--1603
                   Yicheng Kang   Measuring timeliness of annual reports
                                  filing by jump additive models . . . . . 1604--1621
            Jared D. Fisher and   
             David W. Puelz and   
             Carlos M. Carvalho   Monotonic effects of characteristics on
                                  returns  . . . . . . . . . . . . . . . . 1622--1650
            Erin M. Schliep and   
           Sarah M. Collins and   
      Shirley Rojas-Salazar and   
             Noah R. Lottig and   
               Emily H. Stanley   Data fusion model for speciated nitrogen
                                  to identify environmental drivers and
                                  improve estimation of nitrogen in lakes  1651--1675
                Yulia Baker and   
            Tiffany M. Tang and   
              Genevera I. Allen   Feature selection for data integration
                                  with mixed multiview data  . . . . . . . 1676--1698
                Yuanjun Gao and   
                 Jack Goetz and   
           Matthew Connelly and   
                 Rahul Mazumder   Mining events with declassified
                                  diplomatic documents . . . . . . . . . . 1699--1723
           Yoshikazu Terada and   
            Issei Ogasawara and   
                     Ken Nakata   Classification from only positive and
                                  unlabeled functional data  . . . . . . . 1724--1742
           Federico Ferrari and   
                David B. Dunson   Identifying main effects and
                                  interactions among exposures using
                                  Gaussian processes . . . . . . . . . . . 1743--1758
                   Yan Wang and   
                Xiaowei Yue and   
                    Rui Tuo and   
            Jeffrey H. Hunt and   
                    Jianjun Shi   Effective model calibration via sensible
                                  variable identification and adjustment
                                  with application to composite fuselage
                                  simulation . . . . . . . . . . . . . . . 1759--1776
           Trambak Banerjee and   
    Bhaswar B. Bhattacharya and   
               Gourab Mukherjee   A nearest-neighbor based nonparametric
                                  test for viral remodeling in
                                  heterogeneous single-cell proteomic data 1777--1805
                David Cheng and   
            Rajeev Ayyagari and   
             James Signorovitch   The statistical performance of
                                  matching-adjusted indirect comparisons:
                                  Estimating treatment effects with
                                  aggregate external control data  . . . . 1806--1833
  Marie Du Roy de Chaumaray and   
            Matthieu Marbac and   
                 Fabien Navarro   Mixture of hidden Markov models for
                                  accelerometer data . . . . . . . . . . . 1834--1855
              Tianjian Zhou and   
          Subhajit Sengupta and   
          Peter Müller and   
                        Yuan Ji   RNDClone: Tumor subclone reconstruction
                                  based on integrating DNA and RNA
                                  sequence data  . . . . . . . . . . . . . 1856--1877
       Matthew D. Koslovsky and   
     Emily T. Hébert and   
       Michael S. Businelle and   
                Marina Vannucci   A Bayesian time-varying effect model for
                                  behavioral mHealth data  . . . . . . . . 1878--1902
                  Yajuan Si and   
                 Mari Palta and   
                  Maureen Smith   Bayesian profiling multiple imputation
                                  for missing hemoglobin values in
                                  electronic health records  . . . . . . . 1903--1924
        Panayiota Touloupou and   
Bärbel Finkenstädt and   
           Thomas E. Besser and   
            Nigel P. French and   
            Simon E. F. Spencer   Bayesian inference for multistrain
                                  epidemics with application to
                                  \bionameEscherichia coli O157:H7 in
                                  feedlot cattle . . . . . . . . . . . . . 1925--1944
             Brian J. Reich and   
                 Yawen Guan and   
             Denis Fourches and   
           Joshua L. Warren and   
         Stefanie E. Sarnat and   
                Howard H. Chang   Integrative statistical methods for
                                  exposure mixtures and health . . . . . . 1945--1963
         Naomi E. Hannaford and   
             Sarah E. Heaps and   
              Tom M. W. Nye and   
            Tom A. Williams and   
               T. Martin Embley   Incorporating compositional
                                  heterogeneity into Lie Markov models for
                                  phylogenetic inference . . . . . . . . . 1964--1983
              George Mohler and   
               Erin McGrath and   
               Cody Buntain and   
                    Gary LaFree   Hawkes binomial topic model with
                                  applications to coupled conflict ---
                                  Twitter data . . . . . . . . . . . . . . 1984--2002
       Federico Camerlenghi and   
          Bianca Dumitrascu and   
           Federico Ferrari and   
      Barbara E. Engelhardt and   
                 Stefano Favaro   Nonparametric Bayesian multiarmed
                                  bandits for single-cell experiment
                                  design . . . . . . . . . . . . . . . . . 2003--2019
               K. Sham Bhat and   
                 Kary Myers and   
              Earl Lawrence and   
               James Colgan and   
                Elizabeth Judge   Structured discrepancy in Bayesian model
                                  calibration for ChemCam on the Mars
                                  Curiosity rover  . . . . . . . . . . . . 2020--2036
Aleksander Sòltoft-Jensen and   
Mads Peter Heide-Jòrgensen and   
              Susanne Ditlevsen   Modelling the sound production of
                                  narwhals using a point process framework
                                  with memory effects  . . . . . . . . . . 2037--2052
                    Qian Li and   
            John Shamshoian and   
         Damla Sentürk and   
            Catherine Sugar and   
              Shafali Jeste and   
        Charlotte DiStefano and   
              Donatello Telesca   Region-referenced spectral power
                                  dynamics of EEG signals: a hierarchical
                                  modeling approach  . . . . . . . . . . . 2053--2068
         Patrick M. Schnell and   
          Georgia Papadogeorgou   Mitigating unobserved spatial
                                  confounding when estimating the effect
                                  of supermarket access on cardiovascular
                                  disease deaths . . . . . . . . . . . . . 2069--2095
              Iain L. MacDonald   Letter to the Editor: Fitting a folded
                                  normal distribution without EM . . . . . 2096--2098


Annals of Applied Statistics
Volume 4, Number 2101, December, 2020

              Iain L. MacDonald   Rejoinder: Fitting a folded normal
                                  distribution without EM  . . . . . . . . 2099--2100


Annals of Applied Statistics
Volume 15, Number 1, March, 2021

            Garritt L. Page and   
       Fernando A. Quintana and   
                 Gary L. Rosner   Discovering interactions using covariate
                                  informed random partition models . . . . 1--21
              Chenguang Dai and   
                   Duo Chan and   
              Peter Huybers and   
                  Natesh Pillai   Late 19th century navigational
                                  uncertainties and their influence on sea
                                  surface temperature estimates  . . . . . 22--40
                Chris Glynn and   
            Surya T. Tokdar and   
                Azeem Zaman and   
          Valeria C. Caruso and   
               Jeff T. Mohl and   
           Shawn M. Willett and   
               Jennifer M. Groh   Analyzing second order stochasticity of
                                  neural spiking under stimuli-bundle
                                  exposure . . . . . . . . . . . . . . . . 41--63
              Shanghong Xie and   
               Donglin Zeng and   
                   Yuanjia Wang   Integrative network learning for
                                  multimodality biomarker data . . . . . . 64--87
                Xueying Liu and   
              Jeremy Carter and   
                   Brad Ray and   
                  George Mohler   Point process modeling of drug overdoses
                                  with heterogeneous and missing data  . . 88--101
                 Emily Berg and   
                  Jae-Kwang Kim   An approximate best prediction approach
                                  to small area estimation for sheet and
                                  rill erosion under informative sampling  102--125
        Tanayott Thaweethai and   
         David E. Arterburn and   
           Karen J. Coleman and   
              Sebastien Haneuse   Robust inference when combining
                                  inverse-probability weighting and
                                  multiple imputation to address missing
                                  data with application to an electronic
                                  health records-based study of bariatric
                                  surgery  . . . . . . . . . . . . . . . . 126--147
             Gemma E. Moran and   
    Veronika Rocková and   
               Edward I. George   Spike-and-slab Lasso biclustering  . . . 148--173
              Moreno Ursino and   
       Christian Röver and   
                Sarah Zohar and   
                     Tim Friede   Random-effects meta-analysis of Phase I
                                  dose-finding studies using stochastic
                                  process priors . . . . . . . . . . . . . 174--193
                 Jenny Yang and   
                   Yang Liu and   
                 Yufeng Liu and   
                        Wei Sun   Model free estimation of graphical model
                                  using gene expression data . . . . . . . 194--207
           Jacob M. Schauer and   
      Kaitlyn G. Fitzgerald and   
          Sarah Peko-Spicer and   
          Mena C. R. Whalen and   
           Rrita Zejnullahi and   
                Larry V. Hedges   An evaluation of statistical methods for
                                  aggregate patterns of replication
                                  failure  . . . . . . . . . . . . . . . . 208--229
               Zhenyu Zhang and   
          Akihiko Nishimura and   
               Paul Bastide and   
                   Xiang Ji and   
           Rebecca P. Payne and   
             Philip Goulder and   
             Philippe Lemey and   
                Marc A. Suchard   Large-scale inference of correlation
                                  among mixed-type biological traits with
                                  phylogenetic multivariate probit models  230--251
                 Jing Huang and   
                     Yi Cai and   
               Jingcheng Du and   
                  Ruosha Li and   
         Susan S. Ellenberg and   
              Sean Hennessy and   
                    Cui Tao and   
                      Yong Chen   Monitoring vaccine safety by studying
                                  temporal variation of adverse events
                                  using vaccine adverse event reporting
                                  system . . . . . . . . . . . . . . . . . 252--269
            Gregory J. Hunt and   
       Johann A. Gagnon-Bartsch   The role of scale in the estimation of
                                  cell-type proportions  . . . . . . . . . 270--286
          Lorenzo Fattorini and   
            Sara Franceschi and   
         Marzia Marcheselli and   
            Caterina Pisani and   
                  Luca Pratelli   Two-phase sampling strategies for
                                  design-based mapping of continuous
                                  spatial populations in environmental
                                  surveys  . . . . . . . . . . . . . . . . 287--303
                     Fan Li and   
          Andrea Mercatanti and   
        Taneli Mäkinen and   
             Andrea Silvestrini   A regression discontinuity design for
                                  ordinal running variables: Evaluating
                                  central bank purchases of corporate
                                  bonds  . . . . . . . . . . . . . . . . . 304--322
           Joshua L. Warren and   
         Marie Lynn Miranda and   
           Joshua L. Tootoo and   
           Claire E. Osgood and   
               Michelle L. Bell   Spatial distributed lag data fusion for
                                  estimating ambient air pollution . . . . 323--342
                  Jean Feng and   
      William S. DeWitt III and   
              Aaron McKenna and   
                 Noah Simon and   
              Amy D. Willis and   
         Frederick A. Matsen IV   Estimation of cell lineage trees by
                                  maximum-likelihood phylogenetics . . . . 343--362
              Qingyuan Zhao and   
                Nianqiao Ju and   
           Sergio Bacallado and   
                  Rajen D. Shah   BETS: The dangers of selection bias in
                                  early analyses of the coronavirus
                                  disease (COVID-19) pandemic  . . . . . . 363--390
                An-Shun Tai and   
            George C. Tseng and   
                 Wen-Ping Hsieh   BayICE: a Bayesian hierarchical model
                                  for semireference-based deconvolution of
                                  bulk transcriptomic data . . . . . . . . 391--411
              Mingyang Shan and   
             Kali S. Thomas and   
                    Roee Gutman   A multiple imputation procedure for
                                  record linkage and causal inference to
                                  estimate the effects of home-delivered
                                  meals  . . . . . . . . . . . . . . . . . 412--436
                 Yicheng Li and   
              Adrian E. Raftery   Accounting for smoking in forecasting
                                  mortality and life expectancy  . . . . . 437--459
            Matthew Plumlee and   
            Taylor G. Asher and   
                  Won Chang and   
             Matthew V. Bilskie   High-fidelity hurricane surge
                                  forecasting using emulation and
                                  sequential experiments . . . . . . . . . 460--480
               David K. Lim and   
             Naim U. Rashid and   
              Joseph G. Ibrahim   Model-based feature selection and
                                  clustering of RNA-seq data for
                                  unsupervised subtype discovery . . . . . 481--508
                  Tian Tian and   
               Ruihua Cheng and   
                        Zhi Wei   An empirical Bayes change-point model
                                  for transcriptome time-course data . . . 509--526

Annals of Applied Statistics
Volume 15, Number 2, June, 2021

           Parker H. Holzer and   
        Jessi Cisewski-Kehe and   
              Debra Fischer and   
                      Lily Zhao   A Hermite--Gaussian based exoplanet
                                  radial velocity estimation method  . . . 527--555
            Philip A. White and   
           Durban G. Keeler and   
                  Summer Rupper   Hierarchical integrated spatial process
                                  modeling of monotone West Antarctic snow
                                  density curves . . . . . . . . . . . . . 556--571
                Arnab Hazra and   
             Raphaël Huser   Estimating high-resolution Red Sea
                                  surface temperature hotspots, using a
                                  low-rank semiparametric spatial model    572--596
         Trygve Olav Fossum and   
  Cédric Travelletti and   
                 Jo Eidsvik and   
          David Ginsbourger and   
                    Kanna Rajan   Learning excursion sets of vector-valued
                                  Gaussian random fields for autonomous
                                  ocean sampling . . . . . . . . . . . . . 597--618
                 Min Ho Cho and   
           Sebastian Kurtek and   
           Steven N. MacEachern   Aggregated pairwise classification of
                                  elastic planar shapes  . . . . . . . . . 619--637
                 Bruce Wang and   
           Timothy Sudijono and   
          Henry Kirveslahti and   
                Tingran Gao and   
           Douglas M. Boyer and   
            Sayan Mukherjee and   
                 Lorin Crawford   A statistical pipeline for identifying
                                  physical features that differentiate
                                  classes of $3$D shapes . . . . . . . . . 638--661
                 Shiyuan He and   
               Zhenfeng Lin and   
               Wenlong Yuan and   
             Lucas M. Macri and   
               Jianhua Z. Huang   Simultaneous inference of periods and
                                  period-luminosity relations for Mira
                                  variable stars . . . . . . . . . . . . . 662--687
            Kyle P. Messier and   
              Matthias Katzfuss   Scalable penalized spatiotemporal
                                  land-use regression for ground-level
                                  nitrogen dioxide . . . . . . . . . . . . 688--710
         Hannah M. Director and   
          Adrian E. Raftery and   
                Cecilia M. Bitz   Probabilistic forecasting of the Arctic
                                  sea ice edge with contour modeling . . . 711--726
          Christian Capezza and   
             Biagio Palumbo and   
               Yannig Goude and   
              Simon N. Wood and   
                 Matteo Fasiolo   Additive stacking for disaggregate
                                  electricity demand forecasting . . . . . 727--746
                 Shuxi Zeng and   
            Stacy Rosenbaum and   
           Susan C. Alberts and   
        Elizabeth A. Archie and   
                         Fan Li   Causal mediation analysis for sparse and
                                  irregular longitudinal data  . . . . . . 747--767
                  Yang Yang and   
                 Chunlin Ji and   
                        Ke Deng   Rapid design of metamaterials via
                                  multitarget Bayesian optimization  . . . 768--796
              Devin Johnson and   
               Noel Pelland and   
                Jeremy Sterling   A continuous-time semi-Markov model for
                                  animal movement in a dynamic environment 797--812
                  Guohui Wu and   
             Scott H. Holan and   
               Alexis Avril and   
         Jonas Waldenström   A Bayesian semiparametric Jolly--Seber
                                  model with individual heterogeneity: an
                                  application to migratory mallards at
                                  stopover . . . . . . . . . . . . . . . . 813--830
                 Rong Zhang and   
                   Zhao Ren and   
     Juan C. Celedón and   
                       Wei Chen   Inference of large modified Poisson-type
                                  graphical models: Application to RNA-seq
                                  data in childhood atopic asthma studies  831--855
         Thomas E. Bartlett and   
           Ioannis Kosmidis and   
                  Ricardo Silva   Two-way sparsity for time-varying
                                  networks with applications in genomics   856--879
                   Xiuyu Ma and   
           Keegan Korthauer and   
      Christina Kendziorski and   
              Michael A. Newton   A compositional model to assess
                                  expression changes from single-cell
                                  RNA-seq data . . . . . . . . . . . . . . 880--901
            Robert Jernigan and   
                  Kejue Jia and   
                   Zhao Ren and   
                       Wen Zhou   Large-scale multiple inference of
                                  collective dependence with applications
                                  to protein function  . . . . . . . . . . 902--924
                    Shai He and   
               Aaron Schein and   
             Vishal Sarsani and   
               Patrick Flaherty   A Bayesian nonparametric model for
                                  inferring subclonal populations from
                                  structured DNA sequencing data . . . . . 925--951
               Marie Morvan and   
            Emilie Devijver and   
           Madison Giacofci and   
          Valérie Monbet   Prediction of the NASH through penalized
                                  mixture of logistic regression models    952--970
               Paul Bastide and   
             Lam Si Tung Ho and   
                  Guy Baele and   
             Philippe Lemey and   
                Marc A. Suchard   Efficient Bayesian inference of general
                                  Gaussian models on large phylogenetic
                                  trees  . . . . . . . . . . . . . . . . . 971--997
           Aaron J. Molstad and   
                    Wei Sun and   
                         Li Hsu   A covariance-enhanced approach to
                                  multitissue joint eQTL mapping with
                                  application to transcriptome-wide
                                  association studies  . . . . . . . . . . 998--1016
         Shuchismita Sarkar and   
         Volodymyr Melnykov and   
                      Xuwen Zhu   Tensor-variate finite mixture modeling
                                  for the analysis of university professor
                                  remuneration . . . . . . . . . . . . . . 1017--1036
                Chris Glynn and   
            Thomas H. Byrne and   
              Dennis P. Culhane   Inflection points in community-level
                                  homeless rates . . . . . . . . . . . . . 1037--1053
        Alexander C. McLain and   
                 Siyuan Guo and   
                Marie Thoma and   
                   Jiajia Zhang   Length-biased semicompeting risks models
                                  for cross-sectional data: an application
                                  to current duration of pregnancy attempt
                                  data . . . . . . . . . . . . . . . . . . 1054--1067
      Andreea L. Erciulescu and   
            Jean D. Opsomer and   
                  F. Jay Breidt   A bridging model to reconcile statistics
                                  based on data from multiple surveys  . . 1068--1079

Annals of Applied Statistics
Volume 15, Number 3, September, 2021

                  Xinlei Mi and   
              Patrick Tighe and   
                    Fei Zou and   
                    Baiming Zou   A deep learning semiparametric
                                  regression for adjusting complex
                                  confounding structures . . . . . . . . . 1086--1100
       Henrique Hoeltgebaum and   
                Niall Adams and   
                F. Din-Houn Lau   Unsupervised streaming anomaly detection
                                  for instrumented infrastructure  . . . . 1101--1125
             Theodore Huang and   
               Gregory Idos and   
             Christine Hong and   
          Stephen B. Gruber and   
        Giovanni Parmigiani and   
                 Danielle Braun   Extending models via gradient boosting:
                                  an application to Mendelian models . . . 1126--1146
         Daniel J. McDonald and   
            Michael McBride and   
                  Yupeng Gu and   
            Christopher Raphael   Markov-switching state space models for
                                  uncovering musical interpretation  . . . 1147--1170
        Beniamino Hadj-Amar and   
Bärbel Finkenstädt and   
                Mark Fiecas and   
               Robert Huckstepp   Identifying the recurrence of sleep
                                  apnea using a harmonic hidden Markov
                                  model  . . . . . . . . . . . . . . . . . 1171--1193
       Jennifer E. Starling and   
            Jared S. Murray and   
           Patricia A. Lohr and   
        Abigail R. A. Aiken and   
         Carlos M. Carvalho and   
                 James G. Scott   Targeted Smooth Bayesian Causal Forests:
                                  an analysis of heterogeneous treatment
                                  effects for simultaneous vs. interval
                                  medical abortion regimens over gestation 1194--1219
             Niklas Pfister and   
           Evan G. Williams and   
               Jonas Peters and   
            Ruedi Aebersold and   
            Peter Bühlmann   Stabilizing variable selection and
                                  regression . . . . . . . . . . . . . . . 1220--1246
           Mouloud Belbahri and   
            Alejandro Murua and   
           Olivier Gandouet and   
              Vahid Partovi Nia   Qini-based uplift regression . . . . . . 1247--1272
                   Lin Wang and   
              Jake Elmstedt and   
              Weng Kee Wong and   
                    Hongquan Xu   Orthogonal subsampling for big data
                                  linear regression  . . . . . . . . . . . 1273--1290
                   Jing Qin and   
                  Geng Deng and   
                  Jing Ning and   
                    Ao Yuan and   
                        Yu Shen   Estrogen receptor expression on breast
                                  cancer patients' survival under
                                  shape-restricted Cox regression model    1291--1307
                 Chuoxin Ma and   
              Hongsheng Dai and   
                    Jianxin Pan   Modeling past event feedback through
                                  biomarker dynamics in the multistate
                                  event analysis for cardiovascular
                                  disease data . . . . . . . . . . . . . . 1308--1328
            Staci A. Hepler and   
            Lance A. Waller and   
                 David M. Kline   A multivariate spatiotemporal
                                  change-point model of opioid overdose
                                  deaths in Ohio . . . . . . . . . . . . . 1329--1342
                 Jayant Jha and   
              Prajamitra Bhuyan   Two-stage circular-circular regression
                                  with zero inflation: Application to
                                  medical sciences . . . . . . . . . . . . 1343--1365
          Michele Zemplenyi and   
              Mark J. Meyer and   
            Andres Cardenas and   
        Marie-France Hivert and   
     Sheryl L. Rifas-Shiman and   
               Heike Gibson and   
                 Itai Kloog and   
              Joel Schwartz and   
                 Emily Oken and   
              Dawn L. DeMeo and   
              Diane R. Gold and   
                 Brent A. Coull   Function-on-function regression for the
                                  identification of epigenetic regions
                                  exhibiting windows of susceptibility to
                                  environmental exposures  . . . . . . . . 1366--1385
              Arkaprava Roy and   
               Isaac Lavine and   
             Amy H. Herring and   
                David B. Dunson   Perturbed factor analysis: Accounting
                                  for group differences in exposure
                                  profiles . . . . . . . . . . . . . . . . 1386--1404
             Kelly R. Moran and   
               David Dunson and   
         Matthew W. Wheeler and   
                 Amy H. Herring   Bayesian joint modeling of chemical
                                  structure and dose response curves . . . 1405--1430
           Benjamin B. Risk and   
                Irina Gaynanova   Simultaneous non-Gaussian component
                                  analysis (SING) for data integration in
                                  neuroimaging . . . . . . . . . . . . . . 1431--1454
                     Cai Li and   
                   Heping Zhang   Tensor quantile regression with
                                  application to association between
                                  neuroimages and human intelligence . . . 1455--1477
                Menggang Yu and   
            Chensheng Kuang and   
            Jared D. Huling and   
                  Maureen Smith   Diagnosis-group-specific transitional
                                  care program recommendations for 30-day
                                  rehospitalization reduction  . . . . . . 1478--1498
              Fengqing Chao and   
            Patrick Gerland and   
               Alex R. Cook and   
                Leontine Alkema   Global estimation and scenario-based
                                  projections of sex ratio at birth and
                                  missing female births using a Bayesian
                                  hierarchical time series mixture model   1499--1528
              Zhuoran Shang and   
          Elena A. Erosheva and   
                     Gongjun Xu   Partial-mastery cognitive diagnosis
                                  models . . . . . . . . . . . . . . . . . 1529--1555
              Brady T. West and   
         Roderick J. Little and   
        Rebecca R. Andridge and   
         Philip S. Boonstra and   
               Erin B. Ware and   
               Anita Pandit and   
       Fernanda Alvarado-Leiton   Assessing selection bias in regression
                                  coefficients estimated from
                                  nonprobability samples with applications
                                  to genetics and demographic surveys  . . 1556--1581

Annals of Applied Statistics
Volume 15, Number 4, December, 2021

               Sungkyu Jung and   
                  Kiho Park and   
                   Byungwon Kim   Clustering on the torus by conformal
                                  prediction . . . . . . . . . . . . . . . 1583--1603
                  Luyao Lin and   
              Derek Bingham and   
         Floor Broekgaarden and   
                    Ilya Mandel   Uncertainty quantification of a computer
                                  model for binary black hole formation    1604--1627
       Patrizia Zamberletti and   
           Julien Papa\"\ix and   
              Edith Gabriel and   
                   Thomas Opitz   Markov random field models for
                                  vector-based representations of
                                  landscapes . . . . . . . . . . . . . . . 1628--1651
                 Juhyun Kim and   
                Judong Shen and   
                 Anran Wang and   
          Devan V. Mehrotra and   
                  Seyoon Ko and   
                Jin J. Zhou and   
                       Hua Zhou   VCSEL: Prioritizing SNP-set by penalized
                                  variance component selection . . . . . . 1652--1672
                 Wodan Ling and   
               Wenfei Zhang and   
                  Bin Cheng and   
                       Ying Wei   Zero-inflated quantile rank-score based
                                  test (ZIQRank) with application to
                                  scRNA-seq differential gene expression
                                  analysis . . . . . . . . . . . . . . . . 1673--1696
            Iain Carmichael and   
        Benjamin C. Calhoun and   
       Katherine A. Hoadley and   
        Melissa A. Troester and   
             Joseph Geradts and   
         Heather D. Couture and   
              Linnea Olsson and   
           Charles M. Perou and   
            Marc Niethammer and   
                 Jan Hannig and   
                   J. S. Marron   Joint and individual analysis of breast
                                  cancer histologic images and genomic
                                  covariates . . . . . . . . . . . . . . . 1697--1722
            Roberta De Vito and   
             Ruggero Bellio and   
             Lorenzo Trippa and   
            Giovanni Parmigiani   Bayesian multistudy factor analysis for
                                  high-throughput biological data  . . . . 1723--1741
         Mariano I. Gabitto and   
          Herve Marie-Nelly and   
                 Ari Pakman and   
              Andras Pataki and   
             Xavier Darzacq and   
              Michael I. Jordan   A Bayesian nonparametric approach to
                                  super-resolution single-molecule
                                  localization . . . . . . . . . . . . . . 1742--1766
               Zhenxun Wang and   
                 Lifeng Lin and   
              Thomas Murray and   
            James S. Hodges and   
                     Haitao Chu   Bridging randomized controlled trials
                                  and single-arm trials using commensurate
                                  priors in arm-based network
                                  meta-analysis  . . . . . . . . . . . . . 1767--1787
            Weston D. Viles and   
          Juliette C. Madan and   
                 Hongzhe Li and   
        Margaret R. Karagas and   
                   Anne G. Hoen   Information content of high-order
                                  associations of the human gut microbiota
                                  network  . . . . . . . . . . . . . . . . 1788--1807
            Shariq Mohammed and   
            Karthik Bharath and   
           Sebastian Kurtek and   
                 Arvind Rao and   
Veerabhadran Baladandayuthapani   RADIOHEAD: Radiogenomic analysis
                                  incorporating tumor heterogeneity in
                                  imaging through densities  . . . . . . . 1808--1830
              Jiachen Zhang and   
               Paola Crippa and   
             Marc G. Genton and   
             Stefano Castruccio   Assessing the reliability of wind power
                                  operations under a changing climate with
                                  a non-Gaussian bias correction . . . . . 1831--1849
                 Shuoran Li and   
            Young Myoung Ko and   
                   Eunshin Byon   Nonparametric importance sampling for
                                  wind turbine reliability analysis with
                                  stochastic computer models . . . . . . . 1850--1871
                 Joe Watson and   
                   Ruth Joy and   
             Dominic Tollit and   
         Sheila J. Thornton and   
Marie Auger-Méthé   Estimating animal utilization
                                  distributions from multiple data types:
                                  a joint spatiotemporal point process
                                  framework  . . . . . . . . . . . . . . . 1872--1896
                Xingchen Yu and   
          Abel Rodríguez   Spatial voting models in circular
                                  spaces: a case study of the U.S. House
                                  of Representatives . . . . . . . . . . . 1897--1922
           Tin Lok James Ng and   
      Thomas Brendan Murphy and   
               Ted Westling and   
         Tyler H. McCormick and   
                 Bailey Fosdick   Modeling the social media relationships
                                  of Irish politicians using a generalized
                                  latent space stochastic blockmodel . . . 1923--1944
               Sneha Jadhav and   
                 Chenjin Ma and   
                Yefei Jiang and   
             Ben-Chang Shia and   
                    Shuangge Ma   Pan-disease clustering analysis of the
                                  trend of period prevalence . . . . . . . 1945--1958
              Tracy Qi Dong and   
                  Jon Wakefield   Space-time smoothing models for
                                  subnational measles routine immunization
                                  coverage estimation with complex survey
                                  data . . . . . . . . . . . . . . . . . . 1959--1979
             Renata Retkute and   
        Panayiota Touloupou and   
María-Gloria Basáñez and   
T. Déirdre Hollingsworth and   
            Simon E. F. Spencer   Integrating geostatistical maps and
                                  infectious disease transmission models
                                  using adaptive multiple importance
                                  sampling . . . . . . . . . . . . . . . . 1980--1998
          Prajamitra Bhuyan and   
              Emma J. McCoy and   
                  Haojie Li and   
               Daniel J. Graham   Analysing the causal effect of London
                                  cycle superhighways on traffic
                                  congestion . . . . . . . . . . . . . . . 1999--2022
                   Ruoqi Yu and   
             Dylan S. Small and   
              Paul R. Rosenbaum   The information in covariate imbalance
                                  in studies of hormone replacement
                                  therapy  . . . . . . . . . . . . . . . . 2023--2042
            Silvia D'Angelo and   
           Lorraine Brennan and   
          Isobel Claire Gormley   Inferring food intake from multiple
                                  biomarkers using a latent variable model 2043--2060
                 Jouni Kuha and   
     Erzsébet Bukodi and   
             John H. Goldthorpe   Mediation analysis for associations of
                                  categorical variables: The role of
                                  education in social class mobility in
                                  Britain  . . . . . . . . . . . . . . . . 2061--2082
      Christopher T. Franck and   
          Christopher E. Wilson   Predicting competitions by combining
                                  conditional logistic regression and
                                  subjective Bayes: an Academy Awards case
                                  study  . . . . . . . . . . . . . . . . . 2083--2100


Annals of Applied Statistics
Volume 16, Number 1, March, 2022

                 Aiyou Chen and   
                  Timothy C. Au   Robust causal inference for incremental
                                  return on ad spend with randomized
                                  paired geo experiments . . . . . . . . . 1--20
                 Yuliang Li and   
                    Yang Ni and   
              Leah H. Rubin and   
           Amanda B. Spence and   
                      Yanxun Xu   BAGEL: a Bayesian graphical model for
                                  inferring drug effect longitudinally on
                                  depression in people with HIV  . . . . . 21--39
                Baqun Zhang and   
                      Min Zhang   Subgroup identification and variable
                                  selection for treatment decision making  40--59
          Andrew J. Spieker and   
           Robert A. Greevy and   
          Lyndsay A. Nelson and   
            Lindsay S. Mayberry   Bounding the local average treatment
                                  effect in an instrumental variable
                                  analysis of engagement with a mobile
                                  intervention . . . . . . . . . . . . . . 60--79
                  Ling Zhou and   
                Shiquan Sun and   
                   Haoda Fu and   
               Peter X.-K. Song   Subgroup-effects models for the analysis
                                  of personal treatment effects  . . . . . 80--103
              Florian Huber and   
                   Luca Rossini   Inference in Bayesian additive vector
                                  autoregressive tree models . . . . . . . 104--123
       Austin E. Schumacher and   
         Tyler H. McCormick and   
              Jon Wakefield and   
                    Yue Chu and   
                Jamie Perin and   
    Francisco Villavicencio and   
                 Noah Simon and   
                         Li Liu   A flexible Bayesian framework to
                                  estimate age- and cause-specific child
                                  mortality over time from sample
                                  registration data  . . . . . . . . . . . 124--143
               Ryan Janicki and   
             Andrew M. Raim and   
             Scott H. Holan and   
                Jerry J. Maples   Bayesian nonparametric multivariate
                                  spatial mixture mixed effects models
                                  with application to American Community
                                  Survey special tabulations . . . . . . . 144--168
              Jane W. Liang and   
                    'Saunak Sen   Sparse matrix linear models for
                                  structured high-throughput data  . . . . 169--192
               Eric F. Lock and   
             Jun Young Park and   
           Katherine A. Hoadley   Bidimensional linked matrix
                                  factorization for pan-omics pan-cancer
                                  analysis . . . . . . . . . . . . . . . . 193--215
                Drew Yarger and   
              Stilian Stoev and   
                   Tailen Hsing   A functional-data approach to the Argo
                                  data . . . . . . . . . . . . . . . . . . 216--246
              Raquel Barata and   
               Raquel Prado and   
             Bruno Sansó   Fast inference for time-varying
                                  quantiles via flexible dynamic models
                                  with application to the characterization
                                  of atmospheric rivers  . . . . . . . . . 247--271
                 Peng Zhong and   
         Raphaël Huser and   
                   Thomas Opitz   Modeling nonstationary temperature
                                  maxima based on extremal dependence
                                  changing with event magnitude  . . . . . 272--299
                 Kaoru Irie and   
                Chris Glynn and   
                 Tevfik Aktekin   Sequential modeling, monitoring, and
                                  forecasting of streaming web traffic
                                  data . . . . . . . . . . . . . . . . . . 300--325
     Edgar Santos-Fernandez and   
            Francesco Denti and   
           Kerrie Mengersen and   
                Antonietta Mira   The role of intrinsic dimension in
                                  high-resolution player tracking
                                  data-Insights in basketball  . . . . . . 326--348
                Tianyu Guan and   
              Robert Nguyen and   
                  Jiguo Cao and   
                     Tim Swartz   In-game win probabilities for the
                                  National Rugby League  . . . . . . . . . 349--367
            Katie E. Severn and   
              Ian L. Dryden and   
               Simon P. Preston   Manifold valued data analysis of samples
                                  of networks, with applications in corpus
                                  linguistics  . . . . . . . . . . . . . . 368--390
         Massimiliano Russo and   
           Burton H. Singer and   
                David B. Dunson   Multivariate mixed membership modeling:
                                  Inferring domain-specific risk profiles  391--413
        Fiammetta Menchetti and   
                  Iavor Bojinov   Estimating the effectiveness of
                                  permanent price reductions for competing
                                  products using multivariate Bayesian
                                  structural time series models  . . . . . 414--435
            Harlan Campbell and   
           Perry de Valpine and   
             Lauren Maxwell and   
    Valentijn M. T. de Jong and   
        Thomas P. A. Debray and   
            Thomas Jaenisch and   
                 Paul Gustafson   Bayesian adjustment for preferential
                                  testing in estimating infection fatality
                                  rates, as motivated by the COVID-19
                                  pandemic . . . . . . . . . . . . . . . . 436--459
        Domenico De Stefano and   
            Francesco Pauli and   
                 Nicola Torelli   Preelectoral polls variability: a
                                  hierarchical Bayesian model to assess
                                  the role of house effects with
                                  application to Italian elections . . . . 460--476
           Thomas J. Fisher and   
                 Jing Zhang and   
        Stephen P. Colegate and   
               Michael J. Vanni   Detecting and modeling changes in a time
                                  series of proportions  . . . . . . . . . 477--494
                   Zoe Guan and   
        Giovanni Parmigiani and   
             Danielle Braun and   
                 Lorenzo Trippa   Prediction of hereditary cancers using
                                  neural networks  . . . . . . . . . . . . 495--520
                 Xichen Mou and   
              Hongmei Zhang and   
                S. Hasan Arshad   Identifying intergenerational patterns
                                  of correlated methylation sites  . . . . 521--536
              Mark J. Meyer and   
          Jeffrey S. Morris and   
        Regina Paxton Gazes and   
                 Brent A. Coull   Ordinal probit functional outcome
                                  regression with application to
                                  computer-use behavior in rhesus monkeys  537--550
                      Yu Gu and   
           John S. Preisser and   
               Donglin Zeng and   
            Poojan Shrestha and   
                Molina Shah and   
Miguel A. Simancas-Pallares and   
             Jeannie Ginnis and   
                  Kimon Divaris   Partitioning around medoids clustering
                                  and random forest classification for
                                  GIS-informed imputation of fluoride
                                  concentration data . . . . . . . . . . . 551--572
         Andrew J. Holbrook and   
                   Xiang Ji and   
                Marc A. Suchard   Bayesian mitigation of spatial
                                  coarsening for a Hawkes model applied to
                                  gunfire, wildfire and viral contagion    573--595
              Aya A. Mitani and   
          Elizabeth K. Kaye and   
               Kerrie P. Nelson   Accounting for drop-out using inverse
                                  probability censoring weights in
                                  longitudinal clustered data with
                                  informative cluster size . . . . . . . . 596--611
                   So Young Ryu   Likelihood-based bacterial
                                  identification approach for bimicrobial
                                  mass spectrometry data . . . . . . . . . 612--624
       Matthew D. Koslovsky and   
          Kristi L. Hoffman and   
           Carrie R. Daniel and   
                Marina Vannucci   Correction to: A Bayesian model of
                                  microbiome data for simultaneous
                                  identification of covariate associations
                                  and prediction of phenotypic outcomes    625--625

Annals of Applied Statistics
Volume 16, Number 2, June, 2022

          Thomas M. Trimbur and   
              Tucker S. McElroy   Modelled approximations to the ideal
                                  filter with application to GDP and its
                                  components . . . . . . . . . . . . . . . 627--651
             David E. Jones and   
          David C. Stenning and   
               Eric B. Ford and   
          Robert L. Wolpert and   
           Thomas J. Loredo and   
       Christian Gilbertson and   
                Xavier Dumusque   Improving exoplanet detection power:
                                  Multivariate Gaussian process models for
                                  stellar activity . . . . . . . . . . . . 652--679
              Wesley Tansey and   
           Christopher Tosh and   
                  David M. Blei   A Bayesian model of dose-response for
                                  cancer drug studies  . . . . . . . . . . 680--705
              Leonhard Held and   
        Charlotte Micheloud and   
                   Samuel Pawel   The assessment of replication success
                                  based on relative effect size  . . . . . 706--720
              Martin Tveten and   
            Idris A. Eckley and   
                 Paul Fearnhead   Scalable change-point and anomaly
                                  detection in cross-correlated data with
                                  an application to condition monitoring   721--743
                Jialei Chen and   
                  Simon Mak and   
           V. Roshan Joseph and   
                    Chuck Zhang   Adaptive design for Gaussian process
                                  regression under censoring . . . . . . . 744--764
          Emanuele Aliverti and   
                David B. Dunson   Composite mixture of log--linear models
                                  with application to psychiatric studies  765--790
         Nicoletta D'Angelo and   
              Giada Adelfio and   
          Antonino Abbruzzo and   
                    Jorge Mateu   Inhomogeneous spatio-temporal point
                                  processes on linear networks for
                                  visitors' stops data . . . . . . . . . . 791--815
                 Boya Zhang and   
          Robert B. Gramacy and   
            Leah R. Johnson and   
            Kenneth A. Rose and   
                     Eric Smith   Batch-sequential design and
                                  heteroskedastic surrogate modeling for
                                  delta smelt conservation . . . . . . . . 816--842
              Marc Schneble and   
           Göran Kauermann   Intensity estimation on geometric
                                  networks with penalized splines  . . . . 843--865
              Jianqiao Wang and   
                Wanjie Wang and   
                     Hongzhe Li   Sparse block signal detection and
                                  identification for shared cross-trait
                                  association analysis . . . . . . . . . . 866--886
             Paul A. Parker and   
             Scott H. Holan and   
                   Ryan Janicki   Computationally efficient Bayesian
                                  unit-level models for non-Gaussian data
                                  under informative sampling with
                                  application to estimation of health
                                  insurance coverage . . . . . . . . . . . 887--904
Árni V. Jóhannesson and   
             Stefan Siegert and   
         Raphaël Huser and   
               Haakon Bakka and   
            Birgir Hrafnkelsson   Approximate Bayesian inference for
                                  analysis of spatiotemporal flood
                                  frequency data . . . . . . . . . . . . . 905--935
                Jiahua Chen and   
                  Yukun Liu and   
          Carilyn G. Taylor and   
                 James V. Zidek   Permutation tests under a rotating
                                  sampling plan with clustered data  . . . 936--958
        Oksana A. Chkrebtii and   
      Yury E. García and   
 Marcos A. Capistrán and   
               Daniel E. Noyola   Inference for stochastic kinetic models
                                  from multiple data sources for joint
                                  estimation of infection dynamics from
                                  aggregate reports and virological data   959--981
                  Sina Mews and   
            Roland Langrock and   
                  Ruth King and   
                   Nicola Quick   Multistate capture-recapture models for
                                  irregularly sampled data . . . . . . . . 982--998
        Toryn L. J. Schafer and   
       Christopher K. Wikle and   
                Mevin B. Hooten   Bayesian inverse reinforcement learning
                                  for collective animal movement . . . . . 999--1013
               Liangyuan Hu and   
                Jungang Zou and   
                Chenyang Gu and   
                   Jiayi Ji and   
              Michael Lopez and   
                     Minal Kale   A flexible sensitivity analysis approach
                                  for unmeasured confounding with multiple
                                  treatments and a binary outcome with
                                  application to SEER-Medicare lung cancer
                                  data . . . . . . . . . . . . . . . . . . 1014--1037
                  Ali Rafei and   
      Carol A. C. Flannagan and   
              Brady T. West and   
             Michael R. Elliott   Robust Bayesian inference for Big Data:
                                  Combining sensor-based records with
                                  traditional survey data  . . . . . . . . 1038--1070
              Tanbin Rahman and   
              Hsin-En Huang and   
                   Yujia Li and   
                An-Shun Tai and   
             Wen-Ping Hseih and   
         Colleen A. McClung and   
                   George Tseng   A sparse negative binomial classifier
                                  with covariate adjustment for RNA-seq
                                  data . . . . . . . . . . . . . . . . . . 1071--1089
               Ander Wilson and   
       Hsiao-Hsien Leon Hsu and   
    Yueh-Hsiu Mathilda Chiu and   
           Robert O. Wright and   
         Rosalind J. Wright and   
                 Brent A. Coull   Kernel machine and distributed lag
                                  models for assessing windows of
                                  susceptibility to environmental mixtures
                                  in children's health studies . . . . . . 1090--1110
            Michael Johnson and   
                Jiongyi Cao and   
                 Hyunseung Kang   Detecting heterogeneous treatment
                                  effects with instrumental variables and
                                  application to the Oregon health
                                  insurance experiment . . . . . . . . . . 1111--1129
               Xiaoyang Guo and   
             Aditi Basu Bal and   
                Tom Needham and   
                Anuj Srivastava   Statistical shape analysis of brain
                                  arterial networks (BAN)  . . . . . . . . 1130--1150
               Shixiang Zhu and   
                        Yao Xie   Spatiotemporal-textual point processes
                                  for crime linkage detection  . . . . . . 1151--1170
                    Jing Wu and   
               Owen G. Ward and   
               James Curley and   
                     Tian Zheng   Markov-modulated Hawkes processes for
                                  modeling sporadic and bursty event
                                  occurrences in social interactions . . . 1171--1190
               Tianhao Wang and   
                     Lei Yu and   
            Sue E. Leurgans and   
           Robert S. Wilson and   
           David A. Bennett and   
              Patricia A. Boyle   Conditional functional clustering for
                                  longitudinal data with heterogeneous
                                  nonlinear patterns . . . . . . . . . . . 1191--1214
             Sydney Kahmann and   
               Erin Hartman and   
                 Jorja Leap and   
         P. Jeffrey Brantingham   Impact evaluation of the LAPD community
                                  safety partnership . . . . . . . . . . . 1215--1235
                    Alon Kipnis   Higher criticism for discriminating
                                  word-frequency tables and authorship
                                  attribution  . . . . . . . . . . . . . . 1236--1252

Annals of Applied Statistics
Volume 16, Number 3, September, 2022

               Yuping Zhang and   
                Disheng Mao and   
               Zhengqing Ouyang   Model-based distance embedding with
                                  applications to chromosomal conformation
                                  biology  . . . . . . . . . . . . . . . . 1253--1267
               Andrew Jones and   
          F. William Townes and   
                  Didong Li and   
          Barbara E. Engelhardt   Contrastive latent variable modeling
                                  with application to case-control
                                  sequencing experiments . . . . . . . . . 1268--1291
                  Yiwen Liu and   
               Xiaoxiao Sun and   
              Wenxuan Zhong and   
                        Bing Li   B-scaling: a novel nonparametric data
                                  fusion method  . . . . . . . . . . . . . 1292--1312
    Francesco Sanna Passino and   
     Melissa J. M. Turcotte and   
              Nicholas A. Heard   Graph link prediction in computer
                                  networks using Poisson matrix
                                  factorisation  . . . . . . . . . . . . . 1313--1332
                     Hu Sun and   
                 Zhijun Hua and   
                  Jiaen Ren and   
                 Shasha Zou and   
                 Yuekai Sun and   
                      Yang Chen   Matrix completion methods for the total
                                  electron content video reconstruction    1333--1358
            Connor P. Gibbs and   
                Ryan Elmore and   
              Bailey K. Fosdick   The causal effect of a timeout at
                                  stopping an opposing run in the NBA  . . 1359--1379
          Antik Chakraborty and   
            Otso Ovaskainen and   
                David B. Dunson   Bayesian semiparametric long memory
                                  models for discretized event data  . . . 1380--1399
          Charles Bouveyron and   
             Julien Jacques and   
           Amandine Schmutz and   
        Fanny Simões and   
                 Silvia Bottini   Co-clustering of multivariate functional
                                  data for the analysis of air pollution
                                  in the South of France . . . . . . . . . 1400--1422
              Tianying Wang and   
        Iuliana Ionita-Laza and   
                       Ying Wei   Integrated Quantile RAnk Test (iQRAT)
                                  for gene-level associations  . . . . . . 1423--1444
           Ying Kuen Cheung and   
          Thevaa Chandereng and   
                  Keith M. Diaz   A novel framework to estimate
                                  multidimensional minimum effective doses
                                  using asymmetric posterior gain and $
                                  \epsilon $-tapering  . . . . . . . . . . 1445--1458
         Iris Ivy M. Gauran and   
               Junyong Park and   
               Ilia Rattsev and   
         Thomas A. Peterson and   
            Maricel G. Kann and   
                    DoHwan Park   Bayesian local false discovery rate for
                                  sparse count data with application to
                                  the discovery of hotspots in protein
                                  domains  . . . . . . . . . . . . . . . . 1459--1475
               Jialiang Mao and   
                          Li Ma   Dirichlet-tree multinomial mixtures for
                                  clustering microbiome compositions . . . 1476--1499
            Louis G. Jensen and   
        David J. Williamson and   
                       Ute Hahn   Semiparametric point process modeling of
                                  blinking artifacts in PALM . . . . . . . 1500--1523
      Léo R. Belzile and   
             Anthony C. Davison   Improved inference on risk measures for
                                  univariate extremes  . . . . . . . . . . 1524--1549
              Jacob Parsons and   
                Xiaoyue Niu and   
                         Le Bao   A Bayesian hierarchical model for
                                  combining multiple data sources in
                                  population size estimation . . . . . . . 1550--1562
             Paul S. Clarke and   
                    Yanchun Bao   Estimating mode effects from a
                                  sequential mixed-mode experiment using
                                  structural moment models . . . . . . . . 1563--1585
          Sebastien Haneuse and   
             Deborah Schrag and   
         Francesca Dominici and   
        Sharon-Lise Normand and   
                     Kyu Ha Lee   Measuring performance for end-of-life
                                  care . . . . . . . . . . . . . . . . . . 1586--1607
               Chiara Masci and   
             Francesca Ieva and   
            Anna Maria Paganoni   Semiparametric multinomial mixed-effects
                                  models: a university students profiling
                                  tool . . . . . . . . . . . . . . . . . . 1608--1632
           Joshua L. Warren and   
            Howard H. Chang and   
           Lauren K. Warren and   
      Matthew J. Strickland and   
          Lyndsey A. Darrow and   
            James A. Mulholland   Critical window variable selection for
                                  mixtures: Estimating the impact of
                                  multiple air pollutants on stillbirth    1633--1652
               Thomas Opitz and   
               Haakon Bakka and   
         Raphaël Huser and   
                 Luigi Lombardo   High-resolution Bayesian mapping of
                                  landslide hazard with unobserved trigger
                                  event  . . . . . . . . . . . . . . . . . 1653--1675
               Guoqing Wang and   
              Abhirup Datta and   
            Martin A. Lindquist   Bayesian functional registration of fMRI
                                  activation maps  . . . . . . . . . . . . 1676--1699
            Emily C. Hector and   
               Peter X.-K. Song   Joint integrative analysis of multiple
                                  data sources with correlated vector
                                  outcomes . . . . . . . . . . . . . . . . 1700--1717
               Yunxiao Chen and   
                     Yan Lu and   
                 Irini Moustaki   Detection of two-way outliers in
                                  multivariate data and application to
                                  cheating detection in educational tests  1718--1746
                   Yun Ling and   
                Martin Lysy and   
                   Ian Seim and   
                  Jay Newby and   
              David B. Hill and   
               Jeremy Cribb and   
              M. Gregory Forest   Measurement error correction in particle
                                  tracking microrheology . . . . . . . . . 1747--1773
                 Ying Huang and   
            Yingying Zhuang and   
                  Peter Gilbert   Sensitivity analysis for evaluating
                                  principal surrogate endpoints relaxing
                                  the equal early clinical risk assumption 1774--1794
                Bingjie Liu and   
                   Xubo Yue and   
               Eunshin Byon and   
                 Raed Al Kontar   Parameter calibration in wake effect
                                  simulation model with stochastic
                                  gradient descent and stratified sampling 1795--1821
                   Yan Gong and   
             Raphaël Huser   Asymmetric tail dependence modeling,
                                  with application to cryptocurrency
                                  market data  . . . . . . . . . . . . . . 1822--1847
           Guido A. Moreira and   
                  Dani Gamerman   Analysis of presence-only data via exact
                                  Bayes, with model and effects
                                  identification . . . . . . . . . . . . . 1848--1867
             Janie Coulombe and   
         Erica E. M. Moodie and   
            Robert W. Platt and   
                Christel Renoux   Estimation of the marginal effect of
                                  antidepressants on body mass index under
                                  confounding and endogenous
                                  covariate-driven monitoring times  . . . 1868--1890
               Junyang Qian and   
            Yosuke Tanigawa and   
                  Ruilin Li and   
          Robert Tibshirani and   
            Manuel A. Rivas and   
                  Trevor Hastie   Large-scale multivariate sparse
                                  regression with applications to UK
                                  Biobank  . . . . . . . . . . . . . . . . 1891--1918
            Philip A. White and   
                 Henry Frye and   
     Michael F. Christensen and   
            Alan E. Gelfand and   
               John A. Silander   Spatial functional data modeling of
                                  plant reflectances . . . . . . . . . . . 1919--1936
                  Won Chang and   
           Bledar A. Konomi and   
       Georgios Karagiannis and   
                 Yawen Guan and   
                   Murali Haran   Ice model calibration using
                                  semicontinuous spatial data  . . . . . . 1937--1961
            Federico Tullio and   
           Francesco Bartolucci   Causal inference for time-varying
                                  treatments in latent Markov models: An
                                  application to the effects of
                                  remittances on poverty dynamics  . . . . 1962--1985
   Falco J. Bargagli-Stoffi and   
           Kristof De Witte and   
                 Giorgio Gnecco   Heterogeneous causal effects with
                                  imperfect compliance: a Bayesian machine
                                  learning approach  . . . . . . . . . . . 1986--2009
             Simon Dirmeier and   
              Niko Beerenwinkel   Structured hierarchical models for
                                  probabilistic inference from
                                  perturbation screening data  . . . . . . 2010--2029
          Gianluca Mastrantonio   Modeling animal movement with
                                  directional persistence and attractive
                                  points . . . . . . . . . . . . . . . . . 2030--2053

Annals of Applied Statistics
Volume 16, Number 4, December, 2022

               Abhisek Saha and   
                 Min Jin Ha and   
            Satwik Acharyya and   
Veerabhadran Baladandayuthapani   A Bayesian precision medicine framework
                                  for calibrating individualized
                                  therapeutic indices in cancer  . . . . . 2055--2082
             Gordon J. Ross and   
            Aleksandar A. Kolev   Semiparametric Bayesian forecasting of
                                  SpatioTemporal earthquake occurrences    2083--2100
              Zhengfan Wang and   
             Miranda J. Fix and   
                  Lucia Hug and   
                 Anu Mishra and   
                Danzhen You and   
            Hannah Blencowe and   
              Jon Wakefield and   
                Leontine Alkema   Estimating the stillbirth rate for 195
                                  countries using a Bayesian sparse
                                  regression model with temporal smoothing 2101--2121
                 Eardi Lila and   
               John A. D. Aston   Functional random effects modeling of
                                  brain shape and connectivity . . . . . . 2122--2144
          Gabriel Loewinger and   
               Prasad Patil and   
         Kenneth T. Kishida and   
            Giovanni Parmigiani   Hierarchical resampling for bagging in
                                  multistudy prediction with applications
                                  to human neurochemical sensing . . . . . 2145--2165
                   Sen Zhao and   
                    Ali Shojaie   Network differential connectivity
                                  analysis . . . . . . . . . . . . . . . . 2166--2182
                   Qiuyu Wu and   
                    Xiangyu Luo   Estimating heterogeneous gene regulatory
                                  networks from zero-inflated single-cell
                                  expression data  . . . . . . . . . . . . 2183--2200
         Marco H. Benedetti and   
       Veronica J. Berrocal and   
             Roderick J. Little   Accounting for survey design in Bayesian
                                  disaggregation of survey-based areal
                                  estimates of proportions: An application
                                  to the American Community Survey . . . . 2201--2230
             Lingjing Jiang and   
                Chris Elrod and   
                Jane J. Kim and   
         Austin D. Swafford and   
                 Rob Knight and   
             Wesley K. Thompson   Bayesian multivariate sparse functional
                                  principal components analysis with
                                  application to longitudinal microbiome
                                  multiomics data  . . . . . . . . . . . . 2231--2249
                  Wei Zhang and   
               Zhiwei Zhang and   
          James F. Troendle and   
                       Aiyi Liu   Data-adaptive efficient estimation
                                  strategies for biomarker studies
                                  embedded in randomized trials  . . . . . 2250--2265
                  Yifei Sun and   
                  Xuming He and   
                     Jianhua Hu   An omnibus test for detection of
                                  subgroup treatment effects via data
                                  partitioning . . . . . . . . . . . . . . 2266--2278
                 Zonghui Hu and   
               Zhiwei Zhang and   
                  Dean Follmann   Assessing treatment effect through
                                  compliance score in randomized trials
                                  with noncompliance . . . . . . . . . . . 2279--2290
               Weicheng Zhu and   
              Zhengyuan Zhu and   
                   Xiongtao Dai   Spatiotemporal satellite data imputation
                                  using sparse functional data analysis    2291--2313
          Harm Jan Boonstra and   
             Jan van den Brakel   Multilevel time-series models for small
                                  area estimation at different frequencies
                                  and domain levels  . . . . . . . . . . . 2314--2338
              Alessio Farcomeni   How many refugees and migrants died
                                  trying to reach Europe? Joint population
                                  size and total estimation  . . . . . . . 2339--2351
              Gautier Viaud and   
                Yuting Chen and   
          Paul-Henry Courn\`ede   Full Bayesian inference in hidden Markov
                                  models of plant growth . . . . . . . . . 2352--2368
           Sirio Legramanti and   
              Tommaso Rigon and   
            Daniele Durante and   
                David B. Dunson   Extended stochastic block models with
                                  application to criminal networks . . . . 2369--2395
               Jingru Zhang and   
     Kathleen R. Merikangas and   
                 Hongzhe Li and   
                  Haochang Shou   Two-sample tests for multivariate
                                  repeated measurements of histogram
                                  objects with applications to wearable
                                  device data  . . . . . . . . . . . . . . 2396--2416
            Alessandro Casa and   
         Tom F. O'Callaghan and   
          Thomas Brendan Murphy   Parsimonious Bayesian factor analysis
                                  for modelling latent structures in
                                  spectroscopy data  . . . . . . . . . . . 2417--2436
            Hee Cheol Chung and   
            Irina Gaynanova and   
                        Yang Ni   Phylogenetically informed Bayesian
                                  truncated copula graphical models for
                                  microbial association networks . . . . . 2437--2457
             Matteo Bonvini and   
          Edward H. Kennedy and   
            Valerie Ventura and   
                Larry Wasserman   Causal inference for the effect of
                                  mobility on COVID-19 deaths  . . . . . . 2458--2480
                 Ruitao Lin and   
                 Haolun Shi and   
               Guosheng Yin and   
             Peter F. Thall and   
                  Ying Yuan and   
         Christopher R. Flowers   Bayesian hierarchical random-effects
                                  meta-analysis and design of phase I
                                  clinical trials  . . . . . . . . . . . . 2481--2504
                   Chih-Li Sung   Estimating functional parameters for
                                  understanding the impact of weather and
                                  government interventions on COVID-19
                                  outbreak . . . . . . . . . . . . . . . . 2505--2522
                  Chen Tang and   
              Han Lin Shang and   
                   Yanrong Yang   Clustering and forecasting multiple
                                  functional time series . . . . . . . . . 2523--2553
            Oliver M. Crook and   
          Kathryn S. Lilley and   
              Laurent Gatto and   
                Paul D. W. Kirk   Semi-supervised nonparametric Bayesian
                                  modelling of spatial proteomics  . . . . 2554--2576
             Joseph Feldman and   
                Daniel R. Kowal   Bayesian data synthesis and the
                                  utility-risk trade-off for mixed
                                  epidemiological data . . . . . . . . . . 2577--2602
               Samuel Baugh and   
                 Karen McKinnon   Hierarchical Bayesian modeling of ocean
                                  heat content and its uncertainty . . . . 2603--2625
         Andrew S. Whiteman and   
         Andreas J. Bartsch and   
                  Jian Kang and   
             Timothy D. Johnson   Bayesian inference for brain activity
                                  from functional magnetic resonance
                                  imaging collected at two spatial
                                  resolutions  . . . . . . . . . . . . . . 2626--2647
                Barak Brill and   
                 Amnon Amir and   
                    Ruth Heller   Testing for differential abundance in
                                  compositional counts data, with
                                  application to microbiome studies  . . . 2648--2671
           Andrew C. Miller and   
            Lauren Anderson and   
             Boris Leistedt and   
         John P. Cunningham and   
              David W. Hogg and   
                  David M. Blei   Mapping interstellar dust with Gaussian
                                  processes  . . . . . . . . . . . . . . . 2672--2692
            Jordan Richards and   
           Jonathan A. Tawn and   
                    Simon Brown   Modelling extremes of spatial aggregates
                                  of precipitation using conditional
                                  methods  . . . . . . . . . . . . . . . . 2693--2713
           Alexandra Larsen and   
                   Shu Yang and   
             Brian J. Reich and   
                 Ana G. Rappold   A spatial causal analysis of wildland
                                  fire-contributed . . . . . . . . . . . . 2714--2731
                    Ting Ye and   
             Dylan S. Small and   
              Paul R. Rosenbaum   Dimensions, power and factors in an
                                  observational study of behavioral
                                  problems after physical abuse of
                                  children . . . . . . . . . . . . . . . . 2732--2754
            Emily L. Morris and   
                   Kevin He and   
                      Jian Kang   Scalar on network regression via
                                  boosting . . . . . . . . . . . . . . . . 2755--2773
          Jonathan Embleton and   
           Marina I. Knight and   
                 Hernando Ombao   Multiscale spectral modelling for
                                  nonstationary time series within an
                                  ordered multiple-trial experiment  . . . 2774--2803
                    Han Yan and   
                 Jiexing Wu and   
                    Yang Li and   
                     Jun S. Liu   Bayesian bi-clustering methods with
                                  applications in computational biology    2804--2831


Annals of Applied Statistics
Volume 17, Number 1, March, 2023

               Mingwei Tang and   
                Gytis Dudas and   
             Trevor Bedford and   
              Vladimir N. Minin   Fitting stochastic epidemic models to
                                  gene genealogies using linear noise
                                  approximation  . . . . . . . . . . . . . 1--22
                   Bo Zhang and   
                  Siyu Heng and   
                    Ting Ye and   
                 Dylan S. Small   Social distancing and COVID-19:
                                  Randomization inference for a structured
                                  dose-response relationship . . . . . . . 23--46
                 Xiulin Xie and   
                     Peihua Qiu   Control charts for dynamic process
                                  monitoring with an application to air
                                  pollution surveillance . . . . . . . . . 47--66
        Juan D. Díaz and   
     José R. Zubizarreta   Complex discontinuity designs using
                                  covariates: Impact of school grade
                                  retention on later life outcomes in
                                  Chile  . . . . . . . . . . . . . . . . . 67--88
                   Jiaqi Gu and   
                Philip L. H. Yu   Social order statistics models for
                                  ranking data with analysis of
                                  preferences in social networks . . . . . 89--107
                  Ben Sheng and   
              Changcheng Li and   
                     Le Bao and   
                       Runze Li   Probabilistic HIV recency classification
                                  --- a logistic regression without
                                  labeled individual level training data   108--129
   María Alonso-Pena and   
              Rosa M. Crujeiras   Analyzing animal escape data with
                                  circular nonparametric multimodal
                                  regression . . . . . . . . . . . . . . . 130--152
               Mary M. Ryan and   
               Daniel L. Gillen   Sequential sampling in prospective
                                  observational studies  . . . . . . . . . 153--177
        Matheus B. Guerrero and   
         Raphaël Huser and   
                 Hernando Ombao   Conex-Connect: Learning patterns in
                                  extremal brain connectivity from
                                  MultiChannel EEG data  . . . . . . . . . 178--198
          Nathaniel Josephs and   
                 Lizhen Lin and   
           Steven Rosenberg and   
               Eric D. Kolaczyk   Bayesian classification, anomaly
                                  detection, and survival analysis using
                                  network inputs with application to the
                                  microbiome . . . . . . . . . . . . . . . 199--224
                     Yan Li and   
                   Kun Chen and   
                    Jun Yan and   
                   Xuebin Zhang   Regularized fingerprinting in detection
                                  and attribution of climate change with
                                  weight matrix optimizing the efficiency
                                  in scaling factor estimation . . . . . . 225--239
                   Hong Sun and   
                 Maochao Xu and   
                      Peng Zhao   A multivariate frequency-severity
                                  framework for healthcare data breaches   240--268
                  Yang Yang and   
                        Ke Deng   Generalized theme dictionary models for
                                  association pattern discovery  . . . . . 269--293
               Zhiwei Zhang and   
                 Zonghui Hu and   
              Dean Follmann and   
                        Lei Nie   Estimating the average treatment effect
                                  in randomized clinical trials with
                                  all-or-none compliance . . . . . . . . . 294--312
        Beatrice Franzolini and   
              Antonio Lijoi and   
             Igor Prünster   Model selection for maternal
                                  hypertensive disorders with symmetric
                                  hierarchical Dirichlet processes . . . . 313--332
              Emily T. Wang and   
              Sharon Chiang and   
               Zulfi Haneef and   
              Vikram R. Rao and   
                Robert Moss and   
                Marina Vannucci   Bayesian non-homogeneous hidden Markov
                                  model with variable selection for
                                  investigating drivers of seizure risk
                                  cycling  . . . . . . . . . . . . . . . . 333--356
               Sangwon Hyun and   
          Mattias Rolf Cape and   
           Francois Ribalet and   
                     Jacob Bien   Modeling cell populations measured by
                                  flow cytometry with covariates using
                                  sparse mixture of regressions  . . . . . 357--377
       Jonathan P. Williams and   
            Danica M. Ommen and   
                     Jan Hannig   Generalized fiducial factor: An
                                  alternative to the Bayes factor for
                                  forensic identification of source
                                  problems . . . . . . . . . . . . . . . . 378--402
   Tananun Songdechakraiwut and   
                   Moo K. Chung   Topological learning for brain networks  403--433
                 Yuming Sun and   
                  Jian Kang and   
              Chad Brummett and   
                          Yi Li   Individualized risk assessment of
                                  preoperative opioid use by interpretable
                                  neural network regression  . . . . . . . 434--453
                   Bo Zhang and   
            Emily J. Mackay and   
                  Mike Baiocchi   Statistical matching and
                                  subclassification with a continuous
                                  dose: Characterization, algorithm, and
                                  application to a health outcomes study   454--475
    Sabyasachi Mukhopadhyay and   
            Wreetabrata Kar and   
               Gourab Mukherjee   Estimating promotion effects in email
                                  marketing using a large-scale
                                  cross-classified Bayesian joint model
                                  for nested imbalanced data . . . . . . . 476--497
           Debbie J. Dupuis and   
          Sebastian Engelke and   
                    Luca Trapin   Modeling panels of extremes  . . . . . . 498--517
               Yaotian Wang and   
                 Guofen Yan and   
              Xiaofeng Wang and   
                 Shuoran Li and   
                Lingyi Peng and   
          Dana L. Tudorascu and   
                 Tingting Zhang   A variational Bayesian approach to
                                  identifying whole-brain directed
                                  networks with fMRI data  . . . . . . . . 518--538
              Matteo Pedone and   
              Amedeo Amedei and   
            Francesco C. Stingo   Subject-specific Dirichlet-multinomial
                                  regression for multi-district microbiota
                                  data analysis  . . . . . . . . . . . . . 539--559
               Jonathan Koh and   
     François Pimont and   
             Jean-Luc Dupuy and   
                   Thomas Opitz   Spatiotemporal wildfire modeling through
                                  point processes with moderate and
                                  extreme marks  . . . . . . . . . . . . . 560--582
                Bohai Zhang and   
                Huiyan Sang and   
              Zhao Tang Luo and   
                      Hui Huang   Bayesian clustering of spatial
                                  functional data with application to a
                                  human mobility study during COVID-19 . . 583--605
        Jesus Lopez-Fidalgo and   
               Caterina May and   
             Jose Antonio Moler   Designing experiments for estimating an
                                  appropriate outlet size for a silo type
                                  problem  . . . . . . . . . . . . . . . . 606--620
               John A. Pura and   
                 Xuechan Li and   
               Cliburn Chan and   
                     Jichun Xie   TEAM: a multiple testing algorithm on
                                  the aggregation tree for flow cytometry
                                  analysis . . . . . . . . . . . . . . . . 621--640
                Philip B. Stark   ALPHA: Audit that learns from previously
                                  hand-audited ballots . . . . . . . . . . 641--679
          Corban Allenbrand and   
                   Ben Sherwood   Model selection uncertainty and
                                  stability in beta regression models: a
                                  study of bootstrap-based model averaging
                                  with an empirical application to
                                  clickstream data . . . . . . . . . . . . 680--710
       Demetrios Papakostas and   
            P. Richard Hahn and   
               Jared Murray and   
                 Frank Zhou and   
                 Joseph Gerakos   Do forecasts of bankruptcy cause
                                  bankruptcy? A machine learning
                                  sensitivity analysis . . . . . . . . . . 711--739
              Joshua Hewitt and   
            Alan E. Gelfand and   
               Robert S. Schick   Time-discretization approximation
                                  enriches continuous-time discrete-space
                                  models for animal movement . . . . . . . 740--760
        Arun K. Kuchibhotla and   
                Richard A. Berk   Nested conformal prediction sets for
                                  classification with applications to
                                  probation data . . . . . . . . . . . . . 761--785
         Tulio L. Criscuolo and   
Renato M. Assunção and   
        Rosangela H. Loschi and   
          Wagner Meira, Jr. and   
               Danna Cruz-Reyes   Handling categorical features with many
                                  levels using a product partition model   786--814
                   Rui Duan and   
                 Jiayi Tong and   
                 Lifeng Lin and   
                Lisa Levine and   
                Mary Sammel and   
              Joel Stoddard and   
                Tianjing Li and   
       Christopher H Schmid and   
                 Haitao Chu and   
                      Yong Chen   PALM: Patient-centered treatment ranking
                                  via large-scale multivariate network
                                  meta-analysis  . . . . . . . . . . . . . 815--837
             Estelle Medous and   
               Camelia Goga and   
            Anne Ruiz-Gazen and   
Jean-François Beaumont and   
          Alain Dessertaine and   
                  Pauline Puech   Many-to-One indirect sampling with
                                  application to the French postal traffic
                                  estimation . . . . . . . . . . . . . . . 838--859
                Wenyu Zhang and   
          Maryclare Griffin and   
              David S. Matteson   Modeling a nonlinear biophysical trend
                                  followed by long-memory equilibrium with
                                  unknown change point . . . . . . . . . . 860--880
                Shikun Wang and   
                  Jing Ning and   
                    Ying Xu and   
          Ya-Chen Tina Shih and   
                    Yu Shen and   
                       Liang Li   An extension of estimating equations to
                                  model longitudinal medical cost
                                  trajectory with Medicare claims data
                                  linked to SEER cancer registry . . . . . 881--899

Annals of Applied Statistics
Volume 17, Number 2, June, 2023

              Luke J. Keele and   
            Eli Ben-Michael and   
                 Avi Feller and   
                Rachel Kelz and   
                  Luke Miratrix   Hospital quality risk standardization
                                  via approximate balancing weights  . . . 901--928
                Syed Rahman and   
              Kshitij Khare and   
         George Michailidis and   
     Carlos Martínez and   
                   Juan Carulla   Estimation of Gaussian directed acyclic
                                  graphs using partial ordering
                                  information with applications to DREAM3
                                  networks and dairy cattle data . . . . . 929--960
                Jungeum Kim and   
                      Xiao Wang   Robust sensible adversarial learning of
                                  deep neural networks for image
                                  classification . . . . . . . . . . . . . 961--984
            Eli Ben-Michael and   
               David Arbour and   
                 Avi Feller and   
           Alexander Franks and   
                 Steven Raphael   Estimating the effects of a California
                                  gun control program with multitask
                                  Gaussian processes . . . . . . . . . . . 985--1016
                Tingting Yu and   
                    Lang Wu and   
                    Jin Qiu and   
               Peter B. Gilbert   Robust joint modelling of left-censored
                                  longitudinal data and survival data with
                                  application to HIV vaccine studies . . . 1017--1037
        Chelsea Krantsevich and   
            P. Richard Hahn and   
                   Yi Zheng and   
                   Charles Katz   Bayesian decision theory for tree-based
                                  adaptive screening tests with an
                                  application to youth delinquency . . . . 1038--1063
    Alexander Wolfgang Jung and   
                Moritz Gerstung   Bayesian Cox regression for large-scale
                                  inference with applications to
                                  electronic health records  . . . . . . . 1064--1085
               Paul Freulon and   
Jérémie Bigot and   
               Boris P. Hejblum   CytOpT: Optimal transport with domain
                                  adaptation for interpreting flow
                                  cytometry data . . . . . . . . . . . . . 1086--1104
                  Siyuan Ma and   
                     Hongzhe Li   A tensor decomposition model for
                                  longitudinal microbiome studies  . . . . 1105--1126
            Amy M. Crawford and   
            Danica M. Ommen and   
           Alicia L. Carriquiry   A rotation-based feature and Bayesian
                                  hierarchical model for the forensic
                                  evaluation of handwriting evidence in a
                                  closed set . . . . . . . . . . . . . . . 1127--1151
                 Zhimei Ren and   
              Emmanuel Cand\`es   Knockoffs with side information  . . . . 1152--1174
                 Zhixing Xu and   
        Jonathan R. Bradley and   
                Debajyoti Sinha   Latent multivariate log-gamma models for
                                  high-dimensional MultiType responses
                                  with application to daily fine
                                  particulate matter and mortality counts  1175--1198
              Chaeryon Kang and   
                     Ying Huang   Identification of immune response
                                  combinations associated with
                                  heterogeneous infection risk in the
                                  immune correlates analysis of HIV
                                  vaccine studies  . . . . . . . . . . . . 1199--1219
                    Ru Wang and   
                   Ye Liang and   
                 Zhuqi Miao and   
                    Tieming Liu   Bayesian analysis for imbalanced
                                  positive-unlabelled diagnosis codes in
                                  electronic health records  . . . . . . . 1220--1238
            Yen-Tsung Huang and   
               Jih-Chang Yu and   
                 Jui-Hsiang Lin   Surrogate marker assessment using
                                  mediation and instrumental variable
                                  analyses in a case-cohort design . . . . 1239--1259
               Trey McNeely and   
              Galen Vincent and   
           Kimberly M. Wood and   
             Rafael Izbicki and   
                     Ann B. Lee   Detecting distributional differences in
                                  labeled sequence data with application
                                  to tropical cyclone satellite imagery    1260--1284
             Thomas Klausch and   
       Eddymurphy U. Akwiwu and   
        Mark A. van de Wiel and   
  Veerle M. H. Coupé and   
               Johannes Berkhof   A Bayesian accelerated failure time
                                  model for interval censored three-state
                                  screening outcomes . . . . . . . . . . . 1285--1306
                 Yikai Wang and   
                       Ying Guo   LOCUS: a regularized blind source
                                  separation method with low-rank
                                  structure for investigating brain
                                  connectivity . . . . . . . . . . . . . . 1307--1332
         Christian Rohrbeck and   
                  Daniel Cooley   Simulating flood event sets using
                                  extremal principal components  . . . . . 1333--1352
           Victoria Knutson and   
      Serge Aleshin-Guendel and   
            Ariel Karlinsky and   
           William Msemburi and   
                  Jon Wakefield   Estimating global and country-specific
                                  excess mortality during the Covid-19
                                  pandemic . . . . . . . . . . . . . . . . 1353--1374
                  Yifei Sun and   
               Sy Han Chiou and   
                Colin O. Wu and   
          Meghan E. McGarry and   
                Chiung-Yu Huang   Dynamic risk prediction triggered by
                                  intermediate events using survival tree
                                  ensembles  . . . . . . . . . . . . . . . 1375--1397
           Debbie J. Dupuis and   
                    Luca Trapin   Mixed-frequency extreme value
                                  regression: Estimating the effect of
                                  mesoscale convective systems on extreme
                                  rainfall intensity . . . . . . . . . . . 1398--1418
              Luke J. Kelly and   
             Robin J. Ryder and   
  Grégoire Clarté   Lagged couplings diagnose Markov chain
                                  Monte Carlo phylogenetic inference . . . 1419--1443
          Andrea Sottosanti and   
                   Davide Risso   Co-clustering of spatially resolved
                                  transcriptomic data  . . . . . . . . . . 1444--1468
             Max Rubinstein and   
            Amelia Haviland and   
                     David Choi   Balancing weights for region-level
                                  analysis: The effect of Medicaid
                                  expansion on the uninsurance rate among
                                  states that did not expand Medicaid  . . 1469--1490
                Beomjo Park and   
             Mikael Kuusela and   
              Donata Giglio and   
                    Alison Gray   Spatiotemporal local interpolation of
                                  global ocean heat transport using Argo
                                  floats: a debiased latent Gaussian
                                  process approach . . . . . . . . . . . . 1491--1520
                 Jouni Kuha and   
              Siliang Zhang and   
                   Fiona Steele   Latent variable models for multivariate
                                  dyadic data with zero inflation:
                                  Analysis of intergenerational exchanges
                                  of family support  . . . . . . . . . . . 1521--1542
              Florian Huber and   
      Tamás Krisztin and   
             Michael Pfarrhofer   A Bayesian panel vector autoregression
                                  to analyze the impact of climate shocks
                                  on high-income economies . . . . . . . . 1543--1573
            Sarah B. Peskoe and   
                 Ning Zhang and   
           Donna Spiegelman and   
                     Molin Wang   Estimation and inference for exposure
                                  effects with latency in the Cox
                                  proportional hazards model in the
                                  presence of exposure measurement error   1574--1591
               Bingkai Wang and   
         Suzanne M. Dufault and   
             Dylan S. Small and   
             Nicholas P. Jewell   Randomization inference for
                                  cluster-randomized test-negative designs
                                  with application to Dengue studies:
                                  Unbiased estimation, partial compliance,
                                  and stepped-wedge design . . . . . . . . 1592--1614
               Xinyuan Chen and   
                   Yiwei Li and   
              Xiangnan Feng and   
                Joseph T. Chang   Variational Bayesian analysis of
                                  nonhomogeneous hidden Markov models with
                                  long and ultralong sequences . . . . . . 1615--1640
           Adam T. Peterson and   
       Veronica J. Berrocal and   
   Emma V. Sanchez-Vaznaugh and   
        Brisa N. Sánchez   How close and how much? Linking health
                                  outcomes to built environment spatial
                                  distributions  . . . . . . . . . . . . . 1641--1662
                Wanjie Wang and   
                  Eric Chen and   
                     Hongzhe Li   Truncated rank-based tests for two-part
                                  models with excessive zeros and
                                  applications to microbiome data  . . . . 1663--1680
              Simone Tiberi and   
          Helena L. Crowell and   
       Pantelis Samartsidis and   
             Lukas M. Weber and   
               Mark D. Robinson   distinct: a novel approach to
                                  differential distribution analyses . . . 1681--1700
                   Ruoqi Yu and   
                Rachel Kelz and   
                Scott Lorch and   
                  Luke J. Keele   The risk of maternal complications after
                                  cesarean delivery: Near-far matching for
                                  instrumental variables study designs
                                  with large observational datasets  . . . 1701--1721
              Jung Yeon Won and   
         Michael R. Elliott and   
   Emma V. Sanchez-Vaznaugh and   
        Brisa N. Sánchez   Integrating multiple built environment
                                  data sources . . . . . . . . . . . . . . 1722--1739
             Clara Hoffmann and   
                    Nadja Klein   Marginally calibrated response
                                  distributions for end-to-end learning in
                                  autonomous driving . . . . . . . . . . . 1740--1763
                  Lin Zhang and   
              Lisa J. Strug and   
                        Lei Sun   Leveraging Hardy--Weinberg
                                  disequilibrium for association testing
                                  in case-control studies  . . . . . . . . 1764--1781
                 Yujing Yao and   
              R. Todd Ogden and   
               Chubing Zeng and   
                    Qixuan Chen   Bivariate hierarchical Bayesian model
                                  for combining summary measures and their
                                  uncertainties from multiple sources  . . 1782--1800

Annals of Applied Statistics
Volume 17, Number 3, September, 2023

                      Anonymous   Table of Contents  . . . . . . . . . . . ??
                      Anonymous   Editorial Board  . . . . . . . . . . . . ??
           Graham C. Gibson and   
          Nicholas G. Reich and   
                 Daniel Sheldon   Real-time mechanistic Bayesian forecasts
                                  of COVID-19 mortality  . . . . . . . . . 1801--1819
              Matthew Bonas and   
             Stefano Castruccio   Calibration of SpatioTemporal forecasts
                                  from citizen science urban air pollution
                                  data with sparse recurrent neural
                                  networks . . . . . . . . . . . . . . . . 1820--1840
              Danilo Pellin and   
                Luca Biasco and   
               Serena Scala and   
            Clelia Di Serio and   
                   Ernst C. Wit   Tracking hematopoietic stem cell
                                  evolution in a Wiskott--Aldrich clinical
                                  trial  . . . . . . . . . . . . . . . . . 1841--1860
            Shuangjie Zhang and   
                Yuning Shen and   
              Irene A. Chen and   
                      Juhee Lee   Bayesian modeling of interaction between
                                  features in sparse multivariate count
                                  data with application to microbiome
                                  study  . . . . . . . . . . . . . . . . . 1861--1883
             Tsung-Hung Yao and   
                  Zhenke Wu and   
            Karthik Bharath and   
                   Jinju Li and   
Veerabhadran Baladandayuthapani   Probabilistic learning of treatment
                                  trees in cancer  . . . . . . . . . . . . 1884--1908
           Sebastian Arnold and   
            Alexander Henzi and   
              Johanna F. Ziegel   Sequentially valid tests for forecast
                                  calibration  . . . . . . . . . . . . . . 1909--1935
            Danilo A. Sarti and   
    Estevão B. Prado and   
             Alan N. Inglis and   
Antônia A. L. dos Santos and   
        Catherine B. Hurley and   
            Rafael A. Moral and   
              Andrew C. Parnell   Bayesian additive regression trees for
                                  genotype by environment interaction
                                  models . . . . . . . . . . . . . . . . . 1936--1957
                Nanwei Wang and   
     Hél\`ene Massam and   
                    Xin Gao and   
              Laurent Briollais   The scalable birth-death MCMC algorithm
                                  for mixed graphical model learning with
                                  application to genomic data integration  1958--1983
              Stephen Walsh and   
       Marco A. R. Ferreira and   
               David Higdon and   
                 Stephanie Zick   A Bayesian hierarchical model framework
                                  to quantify uncertainty of tropical
                                  cyclone precipitation forecasts  . . . . 1984--2001
       Terrance D. Savitsky and   
         Julie Gershunskaya and   
                 Mark Crankshaw   Joint point and variance estimation
                                  under a hierarchical Bayesian model for
                                  survey count data  . . . . . . . . . . . 2002--2018
                    Ben Dai and   
              Xiaotong Shen and   
               Lin Yee Chen and   
                 Chunlin Li and   
                        Wei Pan   Data-adaptive discriminative feature
                                  localization with statistically
                                  guaranteed interpretation  . . . . . . . 2019--2038
               Grace Rhodes and   
             Marie Davidian and   
                      Wenbin Lu   Dynamic prediction of residual life with
                                  longitudinal covariates using long
                                  short-term memory networks . . . . . . . 2039--2058
               Jiming Jiang and   
                Yuanyuan Li and   
               Peter X. K. Song   Postelection analysis of presidential
                                  election/poll data . . . . . . . . . . . 2059--2077
         Megan L. Gelsinger and   
          Maryclare Griffin and   
             David Matteson and   
                Joseph Guinness   Log-Gaussian Cox process modeling of
                                  large spatial lightning data using
                                  spectral and Laplace approximations  . . 2078--2094
                   Yura Kim and   
             Daniel Kessler and   
               Elizaveta Levina   Graph-aware modeling of brain
                                  connectivity networks  . . . . . . . . . 2095--2117
                Olha Bodnar and   
                Viktor Eriksson   Bayesian model selection: Application to
                                  the adjustment of fundamental physical
                                  constants  . . . . . . . . . . . . . . . 2118--2138
               Melody Huang and   
                Naoki Egami and   
               Erin Hartman and   
                  Luke Miratrix   Leveraging population outcomes to
                                  improve the generalization of
                                  experimental results: Application to the
                                  JTPA study . . . . . . . . . . . . . . . 2139--2164
               TingFang Lee and   
         Ashley L. Buchanan and   
        Natallia V. Katenka and   
           Laura Forastiere and   
      M. Elizabeth Halloran and   
         Samuel R. Friedman and   
          Georgios Nikolopoulos   Estimating causal effects of HIV
                                  prevention interventions with
                                  interference in network-based studies
                                  among people who inject drugs  . . . . . 2165--2191
                  Chul Moon and   
                   Qiwei Li and   
                  Guanghua Xiao   Using persistent homology topological
                                  features to characterize medical images:
                                  Case studies on lung and brain cancers   2192--2211
        Isabella N. Grabski and   
            Roberta De Vito and   
             Lorenzo Trippa and   
            Giovanni Parmigiani   Bayesian combinatorial MultiStudy factor
                                  analysis . . . . . . . . . . . . . . . . 2212--2235
              Hajo Holzmann and   
                  Bernhard Klar   Using proxies to improve forecast
                                  evaluation . . . . . . . . . . . . . . . 2236--2255
             Maria De Iorio and   
             Stefano Favaro and   
       Alessandra Guglielmi and   
                      Lifeng Ye   Bayesian nonparametric mixture modeling
                                  for temporal dynamics of gender
                                  stereotypes  . . . . . . . . . . . . . . 2256--2278
             Satyajit Ghosh and   
              Kshitij Khare and   
             George Michailidis   The Bayesian nested lasso for mixed
                                  frequency regression models  . . . . . . 2279--2304
       Jorge Castillo-Mateo and   
   Jesús Asín and   
      Ana C. Cebrián and   
            Alan E. Gelfand and   
          Jesús Abaurrea   Spatial quantile autoregression for
                                  season within year daily maximum
                                  temperature data . . . . . . . . . . . . 2305--2325
                  Yimei Fan and   
                  Yuan Liao and   
             Ilya O. Ryzhov and   
                  Kunpeng Zhang   A dynamic screening algorithm for
                                  hierarchical binary marketing data . . . 2326--2344
                    Yang Li and   
                 Haoyu Yang and   
                 Haochen Yu and   
               Hanwen Huang and   
                        Ye Shen   Penalized estimating equations for
                                  generalized linear models with multiple
                                  imputation . . . . . . . . . . . . . . . 2345--2363
             Andersen Chang and   
              Genevera I. Allen   Subbotin graphical models for extreme
                                  value dependencies with applications to
                                  functional neuronal connectivity . . . . 2364--2386
              Mattia Stival and   
             Mauro Bernardi and   
             Petros Dellaportas   Doubly-online changepoint detection for
                                  monitoring health status during sports
                                  activities . . . . . . . . . . . . . . . 2387--2409
                 Hong Zhang and   
                   Ming Liu and   
                Jiashun Jin and   
                     Zheyang Wu   Signal-noise ratio of genetic
                                  associations and statistical power of
                                  SNP-set tests  . . . . . . . . . . . . . 2410--2431
                 Larry Dong and   
         Erica E. M. Moodie and   
              Laura Villain and   
       Rodolphe Thiébaut   Evaluating the use of generalized
                                  dynamic weighted ordinary least squares
                                  for individualized HIV treatment
                                  strategies . . . . . . . . . . . . . . . 2432--2451
           Jeffrey Näf and   
            Meta-Lina Spohn and   
               Loris Michel and   
            Nicolai Meinshausen   Imputation scores  . . . . . . . . . . . 2452--2472
                   Yuqi Qiu and   
                   Karen Messer   An efficient doubly-robust imputation
                                  framework for longitudinal dropout, with
                                  an application to an Alzheimer's
                                  clinical trial . . . . . . . . . . . . . 2473--2493
         Rebecca Anthopolos and   
                Qixuan Chen and   
            Joseph Sedransk and   
              Mary Thompson and   
                  Gang Meng and   
                   Sandro Galea   A Bayesian growth mixture model for
                                  complex survey data: Clustering
                                  postdisaster PTSD trajectories . . . . . 2494--2514
                     Le Bao and   
                Xiaoyue Niu and   
                  Mary Mahy and   
                  Peter D. Ghys   Estimating HIV epidemics for subnational
                                  areas  . . . . . . . . . . . . . . . . . 2515--2532
           Trambak Banerjee and   
                   Peng Liu and   
           Gourab Mukherjee and   
             Shantanu Dutta and   
                        Hai Che   Joint modeling of playing time and
                                  purchase propensity in massively
                                  multiplayer online role-playing games
                                  using crossed random effects . . . . . . 2533--2554
         Thi Kim Hue Nguyen and   
         Koen van den Berge and   
             Monica Chiogna and   
                   Davide Risso   Structure learning for zero-inflated
                                  counts with an application to
                                  single-cell RNA sequencing data  . . . . 2555--2573
                Haotian Zou and   
               Donglin Zeng and   
                   Luo Xiao and   
                      Sheng Luo   Bayesian inference and dynamic
                                  prediction for multivariate longitudinal
                                  and survival data  . . . . . . . . . . . 2574--2595
           Damien C. H. Wee and   
                  Feng Chen and   
         William T. M. Dunsmuir   Estimating GARCH(1) in the presence of
                                  missing data . . . . . . . . . . . . . . 2596--2618
             Theodore Huang and   
           Matthew Ploenzke and   
                 Danielle Braun   SNIP: An adaptation of sorted
                                  neighborhood methods for deduplicating
                                  pedigree data  . . . . . . . . . . . . . 2619--2638
            Francesco Denti and   
            Ricardo Azevedo and   
                 Chelsie Lo and   
          Damian G. Wheeler and   
            Sunil P. Gandhi and   
           Michele Guindani and   
                 Babak Shahbaba   A horseshoe mixture model for Bayesian
                                  screening with an application to light
                                  sheet fluorescence microscopy in brain
                                  imaging  . . . . . . . . . . . . . . . . 2639--2658
            Colman Humphrey and   
                 Ryan Gross and   
             Dylan S. Small and   
                Shane T. Jensen   Using predictability to improve matching
                                  of urban locations in Philadelphia . . . 2659--2679
                  Suvra Pal and   
             Wisdom Aselisewine   A semiparametric promotion time cure
                                  model with support vector machine  . . . 2680--2699


Annals of Applied Statistics
Volume 3, Number 2700, September, 2023

                Matthias Schmid   Corrigendum: Modeling biomarker ratios
                                  with gamma distributed components  . . . ??